BLASTX nr result

ID: Atractylodes21_contig00004053 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00004053
         (3132 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAL47480.1| cyclin D3 [Helianthus tuberosus]                       498   e-138
gb|AAK54466.1| cyclin D3 [Helianthus annuus]                          411   e-112
dbj|BAA76478.1| NtcycD3-1 [Nicotiana tabacum]                         362   3e-97
emb|CBI40278.3| unnamed protein product [Vitis vinifera]              356   2e-95
ref|XP_002285320.1| PREDICTED: cyclin-D3-2-like [Vitis vinifera]      353   2e-94

>gb|AAL47480.1| cyclin D3 [Helianthus tuberosus]
          Length = 357

 Score =  498 bits (1281), Expect = e-138
 Identities = 257/350 (73%), Positives = 284/350 (81%), Gaps = 16/350 (4%)
 Frame = +3

Query: 1740 MAILSPFSSSFLDTLFCNEEQDRQWSLDHXXXXXXXXXXXXXXXSSHLHL---DQQDLFW 1910
            MAILSP+SSSFLDTLFCNE+QD ++   H               SS LHL   DQ DL W
Sbjct: 1    MAILSPYSSSFLDTLFCNEQQDHEY---HEYEYEDEFTQTTLTDSSDLHLPPLDQLDLSW 57

Query: 1911 EDEELVSLFTKEQEQQKLST------STDPYVFLARKEAVDWILKVKAHYGFTPLTAILA 2072
            E EELVSLFTKEQEQQK +        T P VF ARKEAVDWILKVK+ YGFTPLTAILA
Sbjct: 58   EHEELVSLFTKEQEQQKQTPCTLSFGKTSPSVFAARKEAVDWILKVKSCYGFTPLTAILA 117

Query: 2073 INYLDRFLSSLHFQNDKPWMIQLVAVSCLSLAAKVEETRVPLLLDLQVEDTKFLFEAKNI 2252
            INYLDRFLSSLHFQ DKPWMIQLVAVSCLSLAAKVEET+VPLLLDLQVEDTK+LFEAKNI
Sbjct: 118  INYLDRFLSSLHFQEDKPWMIQLVAVSCLSLAAKVEETQVPLLLDLQVEDTKYLFEAKNI 177

Query: 2253 QNMELLVMSTLKWRMNPVTPISFLDHIVRRLGLTNHLHWDFFKKCEALILCLVSDSRFVY 2432
            Q MELLVMSTLKWRMNPVTPISFLDHIVRRLGLT+H+HWDFFKKCEA+ILCLVSDSRFV 
Sbjct: 178  QKMELLVMSTLKWRMNPVTPISFLDHIVRRLGLTDHVHWDFFKKCEAMILCLVSDSRFVC 237

Query: 2433 YKPSVLATATMLRVVDEVDPPNSIDYKSQLLDLLKTTKESVDECYEVMMDLCYDNPKKRE 2612
            YKPSVLATATML VVDE+DPPN IDYKSQLLDLLKTTK+ ++ECYE++++L YD+  KR+
Sbjct: 238  YKPSVLATATMLHVVDEIDPPNCIDYKSQLLDLLKTTKDDINECYELIVELAYDHHNKRK 297

Query: 2613 H---ESPVYPVSPTGIIDFTCDESSNDSWGFSTHHL----IKKTRIDQQL 2741
            H   E+   PVSP G+IDFTCDESSN+SW  + HH      KKTR+D  +
Sbjct: 298  HDANETTTNPVSPAGVIDFTCDESSNESWELNAHHFREPSFKKTRMDSTI 347


>gb|AAK54466.1| cyclin D3 [Helianthus annuus]
          Length = 308

 Score =  411 bits (1056), Expect = e-112
 Identities = 224/323 (69%), Positives = 253/323 (78%), Gaps = 7/323 (2%)
 Frame = +3

Query: 1740 MAILSPFSSSFLDTLFCNEEQ--DRQWSLDHXXXXXXXXXXXXXXXSSHLH-LDQQDLFW 1910
            MAILS +SSS  +TLFC EEQ  + +  L H               SS +H LD QDL W
Sbjct: 1    MAILSRYSSS--NTLFCIEEQVHEDEDELTHQD-------------SSAIHPLDLQDLCW 45

Query: 1911 EDEELVSLFTKEQEQQKLSTSTDPYVFLARKEAVDWILKVKAHYGFTPLTAILAINYLDR 2090
            E EELVSLFTKE+EQQK +          RKEAVDWILKVK  +GFTPLTAILAINYLDR
Sbjct: 46   EHEELVSLFTKEEEQQKQTPWPSSCTLSFRKEAVDWILKVKGCHGFTPLTAILAINYLDR 105

Query: 2091 FLSSLHFQN-DKPWMIQLVAVSCLSLAAKVEETRVPLLLDLQVEDTKFLFEAKNIQNMEL 2267
            FLSSLHFQ  + PWMI LVAV+CLSLAAK++ET VPLLLDLQ+E++KFLFEAKNIQ  EL
Sbjct: 106  FLSSLHFQKANTPWMIHLVAVTCLSLAAKIQETHVPLLLDLQLEESKFLFEAKNIQKTEL 165

Query: 2268 LVMSTLKWRMNPVTPISFLDHIVRRLGLTNHLHWDFFKKCEALILCLVSDSRFVYYKPSV 2447
            LVMSTLKWRMN VTPISFLDHIVRRLGL+NHLHWDFFKKCEA+IL LV+DSRFV YKPSV
Sbjct: 166  LVMSTLKWRMNLVTPISFLDHIVRRLGLSNHLHWDFFKKCEAMILYLVADSRFVCYKPSV 225

Query: 2448 LATATMLRVVDEVDPPNSIDYKSQLLDLLKTTKESVDECYEVMMDLCYDN---PKKREHE 2618
            LATATML VV+E+DP NSI YKSQLLDLLKTTK+ ++ECY+++MDL YDN    K+ E+E
Sbjct: 226  LATATMLCVVEEIDPTNSIGYKSQLLDLLKTTKDHINECYKLVMDLSYDNHNKGKRDENE 285

Query: 2619 SPVYPVSPTGIIDFTCDESSNDS 2687
              +YPVSP G I F C ESSNDS
Sbjct: 286  RTIYPVSPAGFIGFMCHESSNDS 308


>dbj|BAA76478.1| NtcycD3-1 [Nicotiana tabacum]
          Length = 368

 Score =  362 bits (930), Expect = 3e-97
 Identities = 193/350 (55%), Positives = 250/350 (71%), Gaps = 19/350 (5%)
 Frame = +3

Query: 1764 SSFLDTLFCNEEQDRQWSLDHXXXXXXXXXXXXXXXSSHLHLDQQDLFWEDEELVSLFTK 1943
            S  LD L+C EE+  +   D                   L L +QDLFWEDEEL+SLFTK
Sbjct: 15   SFLLDALYCEEERWEETIEDEILEKEATLPLP-------LPLLEQDLFWEDEELLSLFTK 67

Query: 1944 EQE--QQKLSTSTDPYVFLARKEAVDWILKVKAHYGFTPLTAILAINYLDRFLSSLHFQN 2117
            E+E      +  TDP + L+RKEAV WILKV AHYGF+  TAILAINY DRFLSSLHFQ 
Sbjct: 68   EKETISNFETIKTDPLLCLSRKEAVKWILKVNAHYGFSTFTAILAINYFDRFLSSLHFQK 127

Query: 2118 DKPWMIQLVAVSCLSLAAKVEETRVPLLLDLQVEDTKFLFEAKNIQNMELLVMSTLKWRM 2297
            DKPWMIQLVAV+CLSLAAKVEET+VPLLLD QVED K++FEAK IQ MELLV+S+LKWRM
Sbjct: 128  DKPWMIQLVAVTCLSLAAKVEETQVPLLLDFQVEDAKYVFEAKTIQRMELLVLSSLKWRM 187

Query: 2298 NPVTPISFLDHIVRRLGLTNHLHWDFFKKCEALILCLVSDSRFVYYKPSVLATATMLRVV 2477
            NPVTP+SF+DHI+RRLGL +H+HW+F K+CE ++L +++D RF+ Y PSVLATATML V+
Sbjct: 188  NPVTPLSFVDHIIRRLGLKSHIHWEFLKQCERILLLVIADCRFLSYMPSVLATATMLHVI 247

Query: 2478 DEVDPPNSIDYKSQLLDLLKTTKESVDECYEVMMDLCYDN-PKKREHESPVYPVSPTGII 2654
             +V+P N+ DY++QLL++L  +KE V++CYE++ ++ Y++   KR++ESP+   SP+ +I
Sbjct: 248  HQVEPCNAADYQNQLLEVLNISKEKVNDCYELITEVSYNSISHKRKYESPIN--SPSAVI 305

Query: 2655 D-FTCDESSNDSWGFSTHH--------------LIKKTRI-DQQLGLGSL 2756
            D F   E+SN+SW   T                L KK+R+ +QQ+ L SL
Sbjct: 306  DTFYSSENSNESWDLQTSSSIPSTYSPRDQFLPLFKKSRVQEQQMRLTSL 355


>emb|CBI40278.3| unnamed protein product [Vitis vinifera]
          Length = 374

 Score =  356 bits (913), Expect = 2e-95
 Identities = 194/354 (54%), Positives = 252/354 (71%), Gaps = 20/354 (5%)
 Frame = +3

Query: 1755 PFSSSFL-DTLFCNEEQDRQWSLDHXXXXXXXXXXXXXXXSSHLHLDQQDLFWEDEELVS 1931
            P SSSFL D L+C EE+  +   D                   L L +QDLFWEDEEL+S
Sbjct: 15   PNSSSFLLDALYCEEERWEEEEEDECLQEEAYPSSTLLP----LLLLEQDLFWEDEELLS 70

Query: 1932 LFTKEQEQQKLSTST---DPYVFLARKEAVDWILKVKAHYGFTPLTAILAINYLDRFLSS 2102
            LF+KE++Q  L       D  + +AR++AV+W++KV AHYGF+ +TAILAINYLDRFLSS
Sbjct: 71   LFSKEEQQASLGAGNGEMDGALAVARRQAVEWMMKVNAHYGFSAVTAILAINYLDRFLSS 130

Query: 2103 LHFQNDKPWMIQLVAVSCLSLAAKVEETRVPLLLDLQVEDTKFLFEAKNIQNMELLVMST 2282
            LHFQ DKPWMIQL AV+CLSLAAKVEET+VPLLLDLQVED+K++FEAK IQ MELLV+ST
Sbjct: 131  LHFQRDKPWMIQLAAVTCLSLAAKVEETQVPLLLDLQVEDSKYVFEAKTIQRMELLVLST 190

Query: 2283 LKWRMNPVTPISFLDHIVRRLGLTNHLHWDFFKKCEALILCLVSDSRFVYYKPSVLATAT 2462
            L+W+MNPVTP+SF+DHI+RRLGL  HLHW+F + CE  +L +V+DSRFV Y PSVLATAT
Sbjct: 191  LQWKMNPVTPLSFIDHIIRRLGLKTHLHWEFLRLCERFLLSVVADSRFVRYLPSVLATAT 250

Query: 2463 MLRVVDEVDPPNSIDYKSQLLDLLKTTKESVDECYEVMMDL------CYDNPKKREHESP 2624
            ML V++ V+P N I+Y++QLL +LK  K+ V EC+++++++        +NP KR++   
Sbjct: 251  MLHVINHVEPCNPIEYQNQLLGILKIDKDKVTECHQLIVEVSNTHFYAQNNPHKRKYTK- 309

Query: 2625 VYPVSPTGIID--FTCDESSNDSWGFST-------HHLIKKTRI-DQQLGLGSL 2756
              P SP G++D  F+CD SSNDSW   +         L KK+R  +QQ+ L SL
Sbjct: 310  -IPGSPNGVMDAYFSCD-SSNDSWAVESSVSSSPVDPLFKKSRTQEQQMRLPSL 361


>ref|XP_002285320.1| PREDICTED: cyclin-D3-2-like [Vitis vinifera]
          Length = 386

 Score =  353 bits (906), Expect = 2e-94
 Identities = 194/362 (53%), Positives = 252/362 (69%), Gaps = 28/362 (7%)
 Frame = +3

Query: 1755 PFSSSFL-DTLFCNEEQDRQWSLDHXXXXXXXXXXXXXXXSS--------HLHLDQQDLF 1907
            P SSSFL D L+C EE+  +   D                           L L +QDLF
Sbjct: 15   PNSSSFLLDALYCEEERWEEEEEDECLQEEACEKYGNVDNDGIDPSSTLLPLLLLEQDLF 74

Query: 1908 WEDEELVSLFTKEQEQQKLSTST---DPYVFLARKEAVDWILKVKAHYGFTPLTAILAIN 2078
            WEDEEL+SLF+KE++Q  L       D  + +AR++AV+W++KV AHYGF+ +TAILAIN
Sbjct: 75   WEDEELLSLFSKEEQQASLGAGNGEMDGALAVARRQAVEWMMKVNAHYGFSAVTAILAIN 134

Query: 2079 YLDRFLSSLHFQNDKPWMIQLVAVSCLSLAAKVEETRVPLLLDLQVEDTKFLFEAKNIQN 2258
            YLDRFLSSLHFQ DKPWMIQL AV+CLSLAAKVEET+VPLLLDLQVED+K++FEAK IQ 
Sbjct: 135  YLDRFLSSLHFQRDKPWMIQLAAVTCLSLAAKVEETQVPLLLDLQVEDSKYVFEAKTIQR 194

Query: 2259 MELLVMSTLKWRMNPVTPISFLDHIVRRLGLTNHLHWDFFKKCEALILCLVSDSRFVYYK 2438
            MELLV+STL+W+MNPVTP+SF+DHI+RRLGL  HLHW+F + CE  +L +V+DSRFV Y 
Sbjct: 195  MELLVLSTLQWKMNPVTPLSFIDHIIRRLGLKTHLHWEFLRLCERFLLSVVADSRFVRYL 254

Query: 2439 PSVLATATMLRVVDEVDPPNSIDYKSQLLDLLKTTKESVDECYEVMMDL------CYDNP 2600
            PSVLATATML V++ V+P N I+Y++QLL +LK  K+ V EC+++++++        +NP
Sbjct: 255  PSVLATATMLHVINHVEPCNPIEYQNQLLGILKIDKDKVTECHQLIVEVSNTHFYAQNNP 314

Query: 2601 KKREHESPVYPVSPTGIID--FTCDESSNDSWGFST-------HHLIKKTRI-DQQLGLG 2750
             KR++     P SP G++D  F+CD SSNDSW   +         L KK+R  +QQ+ L 
Sbjct: 315  HKRKYTK--IPGSPNGVMDAYFSCD-SSNDSWAVESSVSSSPVDPLFKKSRTQEQQMRLP 371

Query: 2751 SL 2756
            SL
Sbjct: 372  SL 373


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