BLASTX nr result

ID: Atractylodes21_contig00004050 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00004050
         (1126 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280795.2| PREDICTED: uncharacterized protein LOC100263...   329   7e-88
ref|XP_002319537.1| predicted protein [Populus trichocarpa] gi|2...   321   2e-85
ref|XP_002512380.1| pentatricopeptide repeat-containing protein,...   319   7e-85
emb|CAN60541.1| hypothetical protein VITISV_018290 [Vitis vinifera]   319   9e-85
ref|XP_004156421.1| PREDICTED: putative pentatricopeptide repeat...   298   1e-78

>ref|XP_002280795.2| PREDICTED: uncharacterized protein LOC100263014 [Vitis vinifera]
           gi|296088328|emb|CBI36773.3| unnamed protein product
           [Vitis vinifera]
          Length = 265

 Score =  329 bits (844), Expect = 7e-88
 Identities = 162/229 (70%), Positives = 181/229 (79%)
 Frame = +1

Query: 301 FSSNTNKQFRVNCVRDSNGHQTTMSASSAYQVLDVMPDCTLSDLKAAFRAKVKQFHPDVR 480
           FSS++  +F VNC RD  G +  +S SSAY VL V P C+  +LKAAFRAKVKQFHPDV 
Sbjct: 39  FSSSSTSRFTVNC-RDRTGEEPKLSDSSAYAVLGVDPSCSAPELKAAFRAKVKQFHPDVN 97

Query: 481 KSDDGSSDTMIRRVIQAYXXXXXXXXXXXXXXXCLDPFDAPECEAFDIFVNEVLCVGKGC 660
           K + G SD MIR VIQAY               CLDPFD PECEAFD+FVNEVLCVGKGC
Sbjct: 98  K-EGGDSDKMIRLVIQAYELLSCCSRSEIIERECLDPFDEPECEAFDLFVNEVLCVGKGC 156

Query: 661 PYSCVKTAPHAFTFSSATGTAYATSQGHGEDYQVQLAVGQCPRSCIHYVTPSQRVILEEL 840
           PYSCV  APHAFTF S+TGTA ATSQGHGEDYQVQLAVGQCPRSCIHYVTPSQR++LEEL
Sbjct: 157 PYSCVNKAPHAFTFVSSTGTARATSQGHGEDYQVQLAVGQCPRSCIHYVTPSQRIVLEEL 216

Query: 841 IASILNVPFDCSAEADLLYSLIIKAKFENNRYRKPKKQPNVSTQHVDWY 987
           + SIL+ P+D SAEADLLYSLI+KA+FENNRY+KPK QP  STQHVDW+
Sbjct: 217 LDSILDTPYDTSAEADLLYSLIVKARFENNRYQKPKNQPKGSTQHVDWF 265


>ref|XP_002319537.1| predicted protein [Populus trichocarpa] gi|222857913|gb|EEE95460.1|
           predicted protein [Populus trichocarpa]
          Length = 266

 Score =  321 bits (822), Expect = 2e-85
 Identities = 168/276 (60%), Positives = 201/276 (72%), Gaps = 4/276 (1%)
 Frame = +1

Query: 172 SLCSFYQAQPPI--FKRI--HHRKCQQRPFESSFQWRVRSTIEYPHRFSSNTNKQFRVNC 339
           SLC FY + PPI  F++   +   C   P +         TI      S +T+ +F+ +C
Sbjct: 3   SLC-FYSSLPPIPPFQKTVTNPNNCHNFPSK---------TIPIRLFPSLSTSSKFKPHC 52

Query: 340 VRDSNGHQTTMSASSAYQVLDVMPDCTLSDLKAAFRAKVKQFHPDVRKSDDGSSDTMIRR 519
           +  +    + +S SSAY VL + P C+ + +KAAFRAKVKQFHPD+ K D   SD MIRR
Sbjct: 53  LGRAE-EDSPLSTSSAYTVLGIKPGCSAAAIKAAFRAKVKQFHPDLNK-DGKVSDLMIRR 110

Query: 520 VIQAYXXXXXXXXXXXXXXXCLDPFDAPECEAFDIFVNEVLCVGKGCPYSCVKTAPHAFT 699
           VIQAY               CLDPF+ PECEAFDIFVNEVLCVGKGCPYSCV+ AP+AFT
Sbjct: 111 VIQAYEMLSNFSRPEIIERECLDPFEEPECEAFDIFVNEVLCVGKGCPYSCVQRAPYAFT 170

Query: 700 FSSATGTAYATSQGHGEDYQVQLAVGQCPRSCIHYVTPSQRVILEELIASILNVPFDCSA 879
           ++S+TGTA ATSQGHGEDYQVQLAVGQCPRSCIHYVTPSQR+ILEEL+ SIL VP+DCSA
Sbjct: 171 YASSTGTARATSQGHGEDYQVQLAVGQCPRSCIHYVTPSQRIILEELLDSILEVPYDCSA 230

Query: 880 EADLLYSLIIKAKFENNRYRKPKKQPNVSTQHVDWY 987
           EADLLYSLI+KA+FENNR+RKPKKQP  ST+HVDW+
Sbjct: 231 EADLLYSLIVKARFENNRFRKPKKQPKTSTEHVDWF 266


>ref|XP_002512380.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223548341|gb|EEF49832.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 736

 Score =  319 bits (818), Expect = 7e-85
 Identities = 156/232 (67%), Positives = 180/232 (77%)
 Frame = +1

Query: 292  PHRFSSNTNKQFRVNCVRDSNGHQTTMSASSAYQVLDVMPDCTLSDLKAAFRAKVKQFHP 471
            P RF S++N +F VNC           S+S+A+ VL V P C+ ++LKAAFRAKVKQFHP
Sbjct: 506  PLRFPSHSNSKFTVNCSERIGDDTPLSSSSAAHMVLGVDPGCSAAELKAAFRAKVKQFHP 565

Query: 472  DVRKSDDGSSDTMIRRVIQAYXXXXXXXXXXXXXXXCLDPFDAPECEAFDIFVNEVLCVG 651
            DV + D    DTMIRRVIQAY               CLDPFD PECEAFDIFVNEVLC G
Sbjct: 566  DVNR-DRKFPDTMIRRVIQAYEILSNFSRSEIIESECLDPFDNPECEAFDIFVNEVLCAG 624

Query: 652  KGCPYSCVKTAPHAFTFSSATGTAYATSQGHGEDYQVQLAVGQCPRSCIHYVTPSQRVIL 831
            KGCPYSCV+TAPHAF ++S+TGTA A SQGHGEDY+VQLAVGQCPRSCIHYVTPSQR+IL
Sbjct: 625  KGCPYSCVQTAPHAFAYASSTGTARAISQGHGEDYKVQLAVGQCPRSCIHYVTPSQRIIL 684

Query: 832  EELIASILNVPFDCSAEADLLYSLIIKAKFENNRYRKPKKQPNVSTQHVDWY 987
            EEL+ SIL VP+D SAEAD+LYSLI+KA +ENNRY+KPKKQP  STQHV+W+
Sbjct: 685  EELLDSILGVPYDNSAEADMLYSLIVKATYENNRYQKPKKQPKTSTQHVEWF 736


>emb|CAN60541.1| hypothetical protein VITISV_018290 [Vitis vinifera]
          Length = 322

 Score =  319 bits (817), Expect = 9e-85
 Identities = 158/225 (70%), Positives = 177/225 (78%)
 Frame = +1

Query: 301 FSSNTNKQFRVNCVRDSNGHQTTMSASSAYQVLDVMPDCTLSDLKAAFRAKVKQFHPDVR 480
           FSS++  +F VNC RD  G +  +S SSAY VL V P C+ ++LKAAFRAKVKQFHPDV 
Sbjct: 38  FSSSSTSRFTVNC-RDRTGEEPKLSDSSAYAVLGVDPSCSAAELKAAFRAKVKQFHPDVN 96

Query: 481 KSDDGSSDTMIRRVIQAYXXXXXXXXXXXXXXXCLDPFDAPECEAFDIFVNEVLCVGKGC 660
           K + G SD MIR VIQAY               CLDPFD PECEAFD+FVNEVLCVG GC
Sbjct: 97  K-EGGDSDKMIRLVIQAYELLSCCSRSEIIERECLDPFDEPECEAFDLFVNEVLCVGNGC 155

Query: 661 PYSCVKTAPHAFTFSSATGTAYATSQGHGEDYQVQLAVGQCPRSCIHYVTPSQRVILEEL 840
           PYSCV  APHAFTF S+TGTA ATSQGHGEDYQVQLAVGQCPRSCIHYVTPSQR++LEEL
Sbjct: 156 PYSCVNKAPHAFTFVSSTGTARATSQGHGEDYQVQLAVGQCPRSCIHYVTPSQRIVLEEL 215

Query: 841 IASILNVPFDCSAEADLLYSLIIKAKFENNRYRKPKKQPNVSTQH 975
           + SIL+ P+D SAEADLLYSLI+KA+FENNRY+KPK QP  STQH
Sbjct: 216 LDSILDTPYDTSAEADLLYSLIVKARFENNRYQKPKNQPKGSTQH 260


>ref|XP_004156421.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At1g68930-like [Cucumis sativus]
          Length = 833

 Score =  298 bits (764), Expect = 1e-78
 Identities = 145/230 (63%), Positives = 177/230 (76%), Gaps = 1/230 (0%)
 Frame = +1

Query: 301  FSSNTNKQFRVNCVRDSNGHQTTMSAS-SAYQVLDVMPDCTLSDLKAAFRAKVKQFHPDV 477
            F S++  +F   C + + G  T +S   +AY++L + P C+ S+LKAAFRAKVKQFHPDV
Sbjct: 605  FPSSSTSRFTPICRQRTEGEDTLLSGPMAAYRLLGLDPTCSESELKAAFRAKVKQFHPDV 664

Query: 478  RKSDDGSSDTMIRRVIQAYXXXXXXXXXXXXXXXCLDPFDAPECEAFDIFVNEVLCVGKG 657
             ++ +  SD+MIRRVIQAY               CLDPF+ PECEAFD+FVNE LCVGKG
Sbjct: 665  NRNGN-DSDSMIRRVIQAYEMLSSYSRTEFIERECLDPFENPECEAFDVFVNEFLCVGKG 723

Query: 658  CPYSCVKTAPHAFTFSSATGTAYATSQGHGEDYQVQLAVGQCPRSCIHYVTPSQRVILEE 837
            CPYSCV  APH FTF+S+TGTA A SQGH EDYQ+Q+AVGQCPRSCIHYVTP QR+ILEE
Sbjct: 724  CPYSCVDRAPHVFTFASSTGTARAMSQGHSEDYQLQMAVGQCPRSCIHYVTPLQRIILEE 783

Query: 838  LIASILNVPFDCSAEADLLYSLIIKAKFENNRYRKPKKQPNVSTQHVDWY 987
            L+ S L+VP+D SAEADLLYSLI+K+KFENNRY+KPK++P  ST+ VDWY
Sbjct: 784  LLDSALDVPYDNSAEADLLYSLIVKSKFENNRYKKPKREPKNSTEQVDWY 833


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