BLASTX nr result

ID: Atractylodes21_contig00004048 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00004048
         (1360 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277300.1| PREDICTED: zinc finger CCCH domain-containin...   299   1e-78
ref|XP_003634306.1| PREDICTED: zinc finger CCCH domain-containin...   295   2e-77
ref|XP_002511264.1| nucleic acid binding protein, putative [Rici...   275   3e-71
ref|XP_003522417.1| PREDICTED: zinc finger CCCH domain-containin...   271   2e-70
ref|XP_003549835.1| PREDICTED: zinc finger CCCH domain-containin...   261   2e-67

>ref|XP_002277300.1| PREDICTED: zinc finger CCCH domain-containing protein 43 isoform 1
           [Vitis vinifera] gi|297733636|emb|CBI14883.3| unnamed
           protein product [Vitis vinifera]
          Length = 484

 Score =  299 bits (766), Expect = 1e-78
 Identities = 142/281 (50%), Positives = 190/281 (67%), Gaps = 4/281 (1%)
 Frame = -2

Query: 831 DGLGHEKKVNVFDDFDIDKLIEQKDDDVKGKHEFEIEGEHGSSE--EYLDDEHMHEQRSX 658
           + L  E+   V +   +++  E+K++D +     E++      E  E L+DE        
Sbjct: 62  ESLALEQHEPVVESLALEEREEEKEEDEESDSNGEVKASDDEEEQCENLEDES------- 114

Query: 657 XXXXXXXXXXXGSVAVLDDEDGRKRYSYPLRSDAEDCSYYMRTGICKFGSNCKFNHPLTR 478
                         A  DD+  R  + YP+R DA DCS+Y+RTG CKFGSNCKFNHP+ R
Sbjct: 115 --------------AAKDDKSAR--FQYPVRPDAVDCSFYLRTGTCKFGSNCKFNHPIRR 158

Query: 477 RIQPSKQTVKQREEDS--DRPGKIECKFYLSSGGCKYGKACKYNHSKGRTAITPVLEYNF 304
           + Q +K+ VK++E++   +RPG+ ECK+YL +GGCK+GKAC+YNH+K + +  PVLE NF
Sbjct: 159 KNQVAKEKVKEKEKEEFPERPGQTECKYYLRTGGCKFGKACRYNHTKAKPSAVPVLELNF 218

Query: 303 LGLPIRLGEKECTYYMRNGSCKYGPDCRFNHPDPSPAGGIPATATYENGLSVHLQGASQT 124
           LGLPIR+GEKEC YYMR GSCKYG +CRFNHPDP+ AGG  + + Y NG SV LQGASQ+
Sbjct: 219 LGLPIRMGEKECPYYMRTGSCKYGANCRFNHPDPTAAGGYESPSGYGNGGSVPLQGASQS 278

Query: 123 AMSSWSAPRTPNETAPFVPVLYSPTHSMPPTNPDWNGYQAP 1
            M+SWS+PR  NE APFVP+++SPT  +PP NP+WNGYQAP
Sbjct: 279 NMASWSSPRALNEPAPFVPIMFSPTQGVPPPNPEWNGYQAP 319



 Score = 85.5 bits (210), Expect = 3e-14
 Identities = 35/78 (44%), Positives = 51/78 (65%)
 Frame = -2

Query: 441 EEDSDRPGKIECKFYLSSGGCKYGKACKYNHSKGRTAITPVLEYNFLGLPIRLGEKECTY 262
           E+  +RPG+ EC ++L +G CK+  ACKY+H K R   +P    +  GLP+R  +  CT+
Sbjct: 360 EDFPERPGQPECSYFLKTGDCKFRAACKYHHPKNRIPKSPPCTLSDKGLPLRPDQNICTH 419

Query: 261 YMRNGSCKYGPDCRFNHP 208
           Y R G CK+GP C+F+HP
Sbjct: 420 YNRYGICKFGPACKFDHP 437



 Score = 61.6 bits (148), Expect = 5e-07
 Identities = 33/90 (36%), Positives = 48/90 (53%), Gaps = 2/90 (2%)
 Frame = -2

Query: 576 YPLRSDAEDCSYYMRTGICKFGSNCKFNHPLTRRIQPSKQTVKQREEDSDRPGKIECKFY 397
           +P R    +CSY+++TG CKF + CK++HP   RI  S       +    RP +  C  Y
Sbjct: 362 FPERPGQPECSYFLKTGDCKFRAACKYHHP-KNRIPKSPPCTLSDKGLPLRPDQNICTHY 420

Query: 396 LSSGGCKYGKACKYNH--SKGRTAITPVLE 313
              G CK+G ACK++H  + G +A  P  E
Sbjct: 421 NRYGICKFGPACKFDHPVNYGNSASAPSAE 450


>ref|XP_003634306.1| PREDICTED: zinc finger CCCH domain-containing protein 43 isoform 2
           [Vitis vinifera]
          Length = 481

 Score =  295 bits (755), Expect = 2e-77
 Identities = 140/279 (50%), Positives = 188/279 (67%), Gaps = 4/279 (1%)
 Frame = -2

Query: 831 DGLGHEKKVNVFDDFDIDKLIEQKDDDVKGKHEFEIEGEHGSSE--EYLDDEHMHEQRSX 658
           + L  E+   V +   +++  E+K++D +     E++      E  E L+DE        
Sbjct: 62  ESLALEQHEPVVESLALEEREEEKEEDEESDSNGEVKASDDEEEQCENLEDES------- 114

Query: 657 XXXXXXXXXXXGSVAVLDDEDGRKRYSYPLRSDAEDCSYYMRTGICKFGSNCKFNHPLTR 478
                         A  DD+  R  + YP+R DA DCS+Y+RTG CKFGSNCKFNHP+ R
Sbjct: 115 --------------AAKDDKSAR--FQYPVRPDAVDCSFYLRTGTCKFGSNCKFNHPIRR 158

Query: 477 RIQPSKQTVKQREEDS--DRPGKIECKFYLSSGGCKYGKACKYNHSKGRTAITPVLEYNF 304
           + Q +K+ VK++E++   +RPG+ ECK+YL +GGCK+GKAC+YNH+K + +  PVLE NF
Sbjct: 159 KNQVAKEKVKEKEKEEFPERPGQTECKYYLRTGGCKFGKACRYNHTKAKPSAVPVLELNF 218

Query: 303 LGLPIRLGEKECTYYMRNGSCKYGPDCRFNHPDPSPAGGIPATATYENGLSVHLQGASQT 124
           LGLPIR+GEKEC YYMR GSCKYG +CRFNHPDP+ AGG  + + Y NG SV LQGASQ+
Sbjct: 219 LGLPIRMGEKECPYYMRTGSCKYGANCRFNHPDPTAAGGYESPSGYGNGGSVPLQGASQS 278

Query: 123 AMSSWSAPRTPNETAPFVPVLYSPTHSMPPTNPDWNGYQ 7
            M+SWS+PR  NE APFVP+++SPT  +PP NP+WNGYQ
Sbjct: 279 NMASWSSPRALNEPAPFVPIMFSPTQGVPPPNPEWNGYQ 317



 Score = 85.5 bits (210), Expect = 3e-14
 Identities = 35/78 (44%), Positives = 51/78 (65%)
 Frame = -2

Query: 441 EEDSDRPGKIECKFYLSSGGCKYGKACKYNHSKGRTAITPVLEYNFLGLPIRLGEKECTY 262
           E+  +RPG+ EC ++L +G CK+  ACKY+H K R   +P    +  GLP+R  +  CT+
Sbjct: 357 EDFPERPGQPECSYFLKTGDCKFRAACKYHHPKNRIPKSPPCTLSDKGLPLRPDQNICTH 416

Query: 261 YMRNGSCKYGPDCRFNHP 208
           Y R G CK+GP C+F+HP
Sbjct: 417 YNRYGICKFGPACKFDHP 434



 Score = 61.6 bits (148), Expect = 5e-07
 Identities = 33/90 (36%), Positives = 48/90 (53%), Gaps = 2/90 (2%)
 Frame = -2

Query: 576 YPLRSDAEDCSYYMRTGICKFGSNCKFNHPLTRRIQPSKQTVKQREEDSDRPGKIECKFY 397
           +P R    +CSY+++TG CKF + CK++HP   RI  S       +    RP +  C  Y
Sbjct: 359 FPERPGQPECSYFLKTGDCKFRAACKYHHP-KNRIPKSPPCTLSDKGLPLRPDQNICTHY 417

Query: 396 LSSGGCKYGKACKYNH--SKGRTAITPVLE 313
              G CK+G ACK++H  + G +A  P  E
Sbjct: 418 NRYGICKFGPACKFDHPVNYGNSASAPSAE 447


>ref|XP_002511264.1| nucleic acid binding protein, putative [Ricinus communis]
           gi|223550379|gb|EEF51866.1| nucleic acid binding
           protein, putative [Ricinus communis]
          Length = 495

 Score =  275 bits (702), Expect = 3e-71
 Identities = 138/297 (46%), Positives = 186/297 (62%), Gaps = 26/297 (8%)
 Frame = -2

Query: 819 HEKKVNVFDDFDIDKLIEQKDDDVKGKHEFEIEGEHGSSEEYLDDEHMHEQRSXXXXXXX 640
           HE+  N     ++ K+ E+K ++V  + +F+ EGE  S   + DD     + +       
Sbjct: 44  HEQLKN---QLNLKKIEEKKLEEVDKEDDFDDEGEKDSIGWHQDDGFNSGESNGGEEEQE 100

Query: 639 XXXXXGSVAVL-----DDEDGRKR--------------YSYPLRSDAEDCSYYMRTGICK 517
                     +     DD+D  K+              Y YP+R +AEDCSYYM+TG CK
Sbjct: 101 YNINNNDYDKVGNDDDDDDDVEKKDERSNNGVNRRHNQYQYPVRPEAEDCSYYMKTGTCK 160

Query: 516 FGSNCKFNHPLTRRIQPSKQTVKQREEDSDRPGKIECKFYLSSGGCKYGKACKYNHSK-- 343
           FGSNCKFNHP+ R++Q SK+ VK+REE +DRPG+ ECK+YL +GGCKYGKAC+YNHS+  
Sbjct: 161 FGSNCKFNHPVKRKMQVSKEKVKEREEATDRPGQTECKYYLRTGGCKYGKACRYNHSRAK 220

Query: 342 -----GRTAITPVLEYNFLGLPIRLGEKECTYYMRNGSCKYGPDCRFNHPDPSPAGGIPA 178
                 +TA+ P L+ NFLGLPIR GE+EC YYMRNGSCKYG +CRFNHPDP+  GG   
Sbjct: 221 PLLLQAKTAVFPALDLNFLGLPIRPGERECPYYMRNGSCKYGANCRFNHPDPTTVGGSDP 280

Query: 177 TATYENGLSVHLQGASQTAMSSWSAPRTPNETAPFVPVLYSPTHSMPPTNPDWNGYQ 7
            A + NG S  LQ + Q+ ++SWS+P   NET  F+ +++SPT  +P  NP+WNGYQ
Sbjct: 281 LA-FSNGGSASLQNSLQSNIASWSSPGGLNETPSFMSIMFSPTQGVPSQNPEWNGYQ 336



 Score = 87.0 bits (214), Expect = 1e-14
 Identities = 38/96 (39%), Positives = 58/96 (60%)
 Frame = -2

Query: 495 NHPLTRRIQPSKQTVKQREEDSDRPGKIECKFYLSSGGCKYGKACKYNHSKGRTAITPVL 316
           ++P T     + Q   Q EE  +RPG+ EC +++ +G CK+   CKY+H K   + +P  
Sbjct: 356 SNPATDTNVYAHQQQIQVEEFPERPGQPECSYFMKTGDCKFKSNCKYHHPKNHISKSPPC 415

Query: 315 EYNFLGLPIRLGEKECTYYMRNGSCKYGPDCRFNHP 208
             +  GLP+R G+  C+YY R G CK+GP C+F+HP
Sbjct: 416 VLSDKGLPLRPGQNICSYYSRYGICKFGPACKFDHP 451



 Score = 70.5 bits (171), Expect = 1e-09
 Identities = 33/76 (43%), Positives = 45/76 (59%)
 Frame = -2

Query: 576 YPLRSDAEDCSYYMRTGICKFGSNCKFNHPLTRRIQPSKQTVKQREEDSDRPGKIECKFY 397
           +P R    +CSY+M+TG CKF SNCK++HP    I  S   V   +    RPG+  C +Y
Sbjct: 376 FPERPGQPECSYFMKTGDCKFKSNCKYHHP-KNHISKSPPCVLSDKGLPLRPGQNICSYY 434

Query: 396 LSSGGCKYGKACKYNH 349
              G CK+G ACK++H
Sbjct: 435 SRYGICKFGPACKFDH 450


>ref|XP_003522417.1| PREDICTED: zinc finger CCCH domain-containing protein 43-like
           [Glycine max]
          Length = 570

 Score =  271 bits (694), Expect = 2e-70
 Identities = 135/293 (46%), Positives = 187/293 (63%), Gaps = 13/293 (4%)
 Frame = -2

Query: 840 VRDD---GLGHEKKVNVFDDFDI--DKLIEQKDDDVKGKHEFEI-----EGEHGSSEEYL 691
           VRDD   G+  +  V V DD  +  D L+   DDD   + +  +     +G +G  +E  
Sbjct: 136 VRDDLVGGVVRDDLVVVVDDGGVVRDDLVVVDDDDDGVRDDVVVVVDDDDGWNGGGDEGC 195

Query: 690 D---DEHMHEQRSXXXXXXXXXXXXGSVAVLDDEDGRKRYSYPLRSDAEDCSYYMRTGIC 520
           D   + +++E  S                V  +    +   YPLR +AEDC++Y++TG C
Sbjct: 196 DCIENVNVNESESDKVGGDVE-------GVKGERSSGRAQQYPLRPEAEDCAFYLKTGTC 248

Query: 519 KFGSNCKFNHPLTRRIQPSKQTVKQREEDSDRPGKIECKFYLSSGGCKYGKACKYNHSKG 340
           KFG NCKFNHPL R+ Q  K+   +REE ++R G++ECK+YL SGGCK+GKACK+NH++G
Sbjct: 249 KFGFNCKFNHPLRRKNQAKKENAGEREEQAERSGQMECKYYLRSGGCKFGKACKFNHTRG 308

Query: 339 RTAITPVLEYNFLGLPIRLGEKECTYYMRNGSCKYGPDCRFNHPDPSPAGGIPATATYEN 160
           +++     E NFLGLPIR+GEKEC YYMR GSCK+G +CRFNHPDP+  GG  + + Y N
Sbjct: 309 KSSSASATELNFLGLPIRVGEKECLYYMRTGSCKFGANCRFNHPDPTTVGGGDSPSGYGN 368

Query: 159 GLSVHLQGASQTAMSSWSAPRTPNETAPFVPVLYSPTHSMPPTNPDWNGYQAP 1
           G S+ LQG SQ+++SSWS+ R  NE+APFVPV+ SP   + P + +WNGYQAP
Sbjct: 369 GSSISLQGVSQSSISSWSSTRPLNESAPFVPVILSPNPGVSPQSSEWNGYQAP 421



 Score = 98.6 bits (244), Expect = 3e-18
 Identities = 43/98 (43%), Positives = 59/98 (60%)
 Frame = -2

Query: 441 EEDSDRPGKIECKFYLSSGGCKYGKACKYNHSKGRTAITPVLEYNFLGLPIRLGEKECTY 262
           EE  +RPG+ EC ++L +G CK+   CK++H K R A  P+   +  GLP+R  +  CTY
Sbjct: 457 EEFPERPGEPECSYFLKTGDCKFKSNCKFHHPKNRIARLPLCNLSDKGLPLRPDQNVCTY 516

Query: 261 YMRNGSCKYGPDCRFNHPDPSPAGGIPATATYENGLSV 148
           Y R G CK+GP C+F+HP PS   G    +TY N   V
Sbjct: 517 YRRYGICKFGPACKFDHPAPSTMAGHDQQSTYINSAGV 554



 Score = 65.1 bits (157), Expect = 4e-08
 Identities = 30/76 (39%), Positives = 44/76 (57%)
 Frame = -2

Query: 576 YPLRSDAEDCSYYMRTGICKFGSNCKFNHPLTRRIQPSKQTVKQREEDSDRPGKIECKFY 397
           +P R    +CSY+++TG CKF SNCKF+HP  R  +     +  +     RP +  C +Y
Sbjct: 459 FPERPGEPECSYFLKTGDCKFKSNCKFHHPKNRIARLPLCNLSDKGLPL-RPDQNVCTYY 517

Query: 396 LSSGGCKYGKACKYNH 349
              G CK+G ACK++H
Sbjct: 518 RRYGICKFGPACKFDH 533


>ref|XP_003549835.1| PREDICTED: zinc finger CCCH domain-containing protein 43-like
           [Glycine max]
          Length = 501

 Score =  261 bits (668), Expect = 2e-67
 Identities = 117/196 (59%), Positives = 152/196 (77%), Gaps = 5/196 (2%)
 Frame = -2

Query: 576 YPLRSDAEDCSYYMRTGICKFGSNCKFNHPLTRRIQPSKQTVKQREEDSDRPGKIECKFY 397
           YPLR +AEDC++Y++TG CKFG NCKFNHP+ R+ Q  K+   +REE ++R G  ECK+Y
Sbjct: 150 YPLRPEAEDCAFYIKTGNCKFGFNCKFNHPIRRKSQAVKEKAGEREETTERSGMTECKYY 209

Query: 396 LSSGGCKYGKACKYNHSKGR--TAITPVLEYNFLGLPIRLGEKECTYYMRNGSCKYGPDC 223
             SGGCK+GK+CKYNH++G+  TA  P+LE NFLGLPIRLGE+EC YYMR GSCK+G +C
Sbjct: 210 QRSGGCKFGKSCKYNHTRGKISTAPAPLLELNFLGLPIRLGERECPYYMRTGSCKFGANC 269

Query: 222 RFNHPDPSPAGGI---PATATYENGLSVHLQGASQTAMSSWSAPRTPNETAPFVPVLYSP 52
           +FNHPDP+  GG+   PA+  Y NG S+ LQG SQT++ SWS+PRT NE++PFVP++ SP
Sbjct: 270 KFNHPDPTAVGGVGGDPASG-YGNGGSISLQGVSQTSVPSWSSPRTLNESSPFVPMMLSP 328

Query: 51  THSMPPTNPDWNGYQA 4
           T  +   + DWNGYQA
Sbjct: 329 TQGVSTQSSDWNGYQA 344



 Score = 88.6 bits (218), Expect = 3e-15
 Identities = 41/104 (39%), Positives = 59/104 (56%), Gaps = 2/104 (1%)
 Frame = -2

Query: 441 EEDSDRPGKIECKFYLSSGGCKYGKACKYNHSKGRTAITPVLEYNFLGLPIRLGEKECTY 262
           +E  +RPG+ EC ++L +G CK+   CK+NH K R A  P    +  GLP+R  +  C++
Sbjct: 381 DEFPERPGEPECSYFLKTGDCKFKSNCKFNHPKNRVARLPPCNLSDKGLPLRPDQSVCSH 440

Query: 261 YMRNGSCKYGPDCRFNHPDPSPAGGIPATA--TYENGLSVHLQG 136
           Y R G CK+GP C+F+HP       IP     +Y N  SV + G
Sbjct: 441 YSRYGICKFGPACKFDHPINLQPVMIPGLGQQSYSNSASVEVAG 484



 Score = 68.9 bits (167), Expect = 3e-09
 Identities = 34/78 (43%), Positives = 45/78 (57%), Gaps = 2/78 (2%)
 Frame = -2

Query: 576 YPLRSDAEDCSYYMRTGICKFGSNCKFNHPLTR--RIQPSKQTVKQREEDSDRPGKIECK 403
           +P R    +CSY+++TG CKF SNCKFNHP  R  R+ P   + K       RP +  C 
Sbjct: 383 FPERPGEPECSYFLKTGDCKFKSNCKFNHPKNRVARLPPCNLSDKGLPL---RPDQSVCS 439

Query: 402 FYLSSGGCKYGKACKYNH 349
            Y   G CK+G ACK++H
Sbjct: 440 HYSRYGICKFGPACKFDH 457


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