BLASTX nr result

ID: Atractylodes21_contig00004039 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00004039
         (835 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002319614.1| predicted protein [Populus trichocarpa] gi|2...   166   5e-39
ref|XP_004136275.1| PREDICTED: pre-rRNA-processing protein TSR2 ...   166   6e-39
ref|XP_002512262.1| Pre-rRNA-processing protein TSR2, putative [...   165   1e-38
ref|XP_002274832.1| PREDICTED: pre-rRNA-processing protein TSR2 ...   165   1e-38
ref|XP_002328370.1| predicted protein [Populus trichocarpa] gi|2...   160   3e-37

>ref|XP_002319614.1| predicted protein [Populus trichocarpa] gi|222857990|gb|EEE95537.1|
           predicted protein [Populus trichocarpa]
          Length = 212

 Score =  166 bits (421), Expect = 5e-39
 Identities = 89/188 (47%), Positives = 119/188 (63%), Gaps = 4/188 (2%)
 Frame = -2

Query: 834 AVNQLREGIDLLLARWSALQMAVQNEWGGRDTRQKAQQLAVDIYHWLIRPAESLYVDDLE 655
           +++Q REGI L+L++WSALQ+AV+NEWGGR +   A+QLA DI+ W  +  E LY+DDLE
Sbjct: 25  SISQFREGIRLILSKWSALQLAVENEWGGRGSHLLAEQLASDIFSWFTQSKEPLYIDDLE 84

Query: 654 NLLDDFMLSLNTEIDDGSIEEIAENLIIMHEECLEGNFVSIERLRQSVP-LNAADHRLQV 478
           +++D+ MLSLNT I+DGS+EE+AE L+IMHEECLEGN+ SI++LR   P + A  H  Q 
Sbjct: 85  SIMDEAMLSLNTMIEDGSVEEVAEKLMIMHEECLEGNYSSIQKLRDEGPRMGAHQHVKQA 144

Query: 477 VNGXXXXXXXXXXXXXXXXXMADDVD-PSPNMSDMTLNEP--EPAPAPTVDADGWTVVSS 307
           V                       VD P   +    +N+P  EP        DGWTVVSS
Sbjct: 145 VEDDDDSEDSDSDDKMGDDGSNMMVDTPEFQLKTNLVNKPVNEPGAKEAQSEDGWTVVSS 204

Query: 306 RRNRGGRH 283
           RRN+G R+
Sbjct: 205 RRNKGKRN 212


>ref|XP_004136275.1| PREDICTED: pre-rRNA-processing protein TSR2 homolog [Cucumis
           sativus] gi|449496991|ref|XP_004160283.1| PREDICTED:
           pre-rRNA-processing protein TSR2 homolog [Cucumis
           sativus]
          Length = 193

 Score =  166 bits (420), Expect = 6e-39
 Identities = 93/191 (48%), Positives = 122/191 (63%), Gaps = 12/191 (6%)
 Frame = -2

Query: 819 REGIDLLLARWSALQMAVQNEWGGRDTRQKAQQLAVDIYHWLIRPAESLYVDDLENLLDD 640
           +EGI L+L+RWSALQ+AV+NEWGGRD+R+K + L  +I+ W  +  E LY+DDLE +LD+
Sbjct: 18  QEGIGLVLSRWSALQLAVENEWGGRDSRRKVELLCAEIFTWFTQNKEQLYIDDLEIILDE 77

Query: 639 FMLSLNTEIDDGSIEEIAENLIIMHEECLEGNFVSIERLRQSV-PLNAADHRLQVVNGXX 463
            MLSL+T++DDGSIEE+AE LIIMHEEC++GNF SIERLRQS  P  A  H  Q  +   
Sbjct: 78  AMLSLSTQVDDGSIEEVAEKLIIMHEECVDGNFSSIERLRQSPRPQVAHAHVNQAESDDD 137

Query: 462 XXXXXXXXXXXXXXXMADDVDPSPNMSDMTLNEPEPA----------PAPTVDA-DGWTV 316
                            DDV+   N +DM ++  +PA          P  T +A DGW  
Sbjct: 138 DD---------------DDVEEDVNRNDMMVDAVQPAQSRPANPQLNPEATAEAEDGWVQ 182

Query: 315 VSSRRNRGGRH 283
           V+SRRNRG R+
Sbjct: 183 VTSRRNRGTRN 193


>ref|XP_002512262.1| Pre-rRNA-processing protein TSR2, putative [Ricinus communis]
           gi|223548223|gb|EEF49714.1| Pre-rRNA-processing protein
           TSR2, putative [Ricinus communis]
          Length = 213

 Score =  165 bits (417), Expect = 1e-38
 Identities = 90/193 (46%), Positives = 117/193 (60%), Gaps = 9/193 (4%)
 Frame = -2

Query: 834 AVNQLREGIDLLLARWSALQMAVQNEWGGRDTRQKAQQLAVDIYHWLIRPAESLYVDDLE 655
           +V   +EGI L+L+RWSALQ+AV+NEWGGR +RQ A Q+  DI+ W  +  E LY+DDLE
Sbjct: 23  SVPLFQEGIFLILSRWSALQLAVENEWGGRGSRQLADQIGFDIFSWFTQSKEPLYIDDLE 82

Query: 654 NLLDDFMLSLNTEIDDGSIEEIAENLIIMHEECLEGNFVSIERLRQSVP-LNAADHRLQV 478
           N+LD+ M+SLNT I+DGS+EE+AE L+IMHEECLEGN+ +IE+LRQ+ P      H  Q 
Sbjct: 83  NILDEGMISLNTMIEDGSVEEVAEKLMIMHEECLEGNYHTIEQLRQARPTAGVHQHIRQA 142

Query: 477 VNG--------XXXXXXXXXXXXXXXXXMADDVDPSPNMSDMTLNEPEPAPAPTVDADGW 322
            NG                          A      PN  DM +NEP    A     D W
Sbjct: 143 ANGDDDEDDDSSDDDDNSMGDNRSNMMMDAPKFQSKPNEVDMQVNEPSCQEAQV--EDEW 200

Query: 321 TVVSSRRNRGGRH 283
           TV+SS++NRG R+
Sbjct: 201 TVISSKKNRGKRN 213


>ref|XP_002274832.1| PREDICTED: pre-rRNA-processing protein TSR2 homolog [Vitis
           vinifera] gi|298204922|emb|CBI34229.3| unnamed protein
           product [Vitis vinifera]
          Length = 208

 Score =  165 bits (417), Expect = 1e-38
 Identities = 90/195 (46%), Positives = 120/195 (61%), Gaps = 11/195 (5%)
 Frame = -2

Query: 834 AVNQLREGIDLLLARWSALQMAVQNEWGGRDTRQKAQQLAVDIYHWLIRPAESLYVDDLE 655
           A + L++GI +LL++WSALQMAV NEWGGR + Q A QLA+DI+ W     E LY+DDLE
Sbjct: 14  ATHHLQQGIVMLLSQWSALQMAVHNEWGGRQSSQLADQLALDIFSWFTHSREPLYIDDLE 73

Query: 654 NLLDDFMLSLNTEIDDGSIEEIAENLIIMHEECLEGNFVSIERLRQSVPLNAADHRLQVV 475
           N+LD+ MLSLNT  +DGSIEE+AE L+ MHEECLEGN+ SIE+LR++    A  H  Q V
Sbjct: 74  NILDEAMLSLNTMTEDGSIEEVAEKLMTMHEECLEGNYQSIEKLREAGSRPAVHHIRQAV 133

Query: 474 NGXXXXXXXXXXXXXXXXXMADDVD--------PSPNM--SDMTLNEPEPAPAPTVDA-D 328
           N                    +  +        P PN+  ++M + EP  +     +A D
Sbjct: 134 NEDNDDDDDDDDDNDENMGNDNSSNMIVDAPEAPPPNLNPAEMPVEEPRASNPKVAEADD 193

Query: 327 GWTVVSSRRNRGGRH 283
           GW VV+S+RNRG R+
Sbjct: 194 GWVVVASKRNRGKRN 208


>ref|XP_002328370.1| predicted protein [Populus trichocarpa] gi|222838085|gb|EEE76450.1|
           predicted protein [Populus trichocarpa]
          Length = 213

 Score =  160 bits (406), Expect = 3e-37
 Identities = 90/188 (47%), Positives = 117/188 (62%), Gaps = 4/188 (2%)
 Frame = -2

Query: 834 AVNQLREGIDLLLARWSALQMAVQNEWGGRDTRQKAQQLAVDIYHWLIRPAESLYVDDLE 655
           +++Q REGI L+L++WSALQ+AV+NEWGGR +   A+QLA DI  W  +  E L++DDLE
Sbjct: 26  SISQFREGICLILSKWSALQLAVENEWGGRGSGLLAEQLASDILSWFTQSKEPLFIDDLE 85

Query: 654 NLLDDFMLSLNTEIDDGSIEEIAENLIIMHEECLEGNFVSIERLRQSVP-LNAADHRLQV 478
            +LD+ MLSLNT IDDGSIEE+AE L+IMHEECLEGN+ SI++LR++ P   A  H  Q 
Sbjct: 86  GILDEAMLSLNTMIDDGSIEEVAEKLMIMHEECLEGNYSSIQKLREAAPRTRAHQHVKQA 145

Query: 477 VNGXXXXXXXXXXXXXXXXXMADDVDPSPNMSDM-TLNEP--EPAPAPTVDADGWTVVSS 307
           V+                      VD     S M  +N+P   P        DGWTVVSS
Sbjct: 146 VDSDDDSEDSGNDDKMGDDESNMMVDAPEFQSKMYPVNKPVNVPRAKEAQSEDGWTVVSS 205

Query: 306 RRNRGGRH 283
           RRN+  R+
Sbjct: 206 RRNKDKRN 213


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