BLASTX nr result
ID: Atractylodes21_contig00003950
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atractylodes21_contig00003950
(1356 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI28010.3| unnamed protein product [Vitis vinifera] 479 e-133
ref|XP_002280491.1| PREDICTED: probable RNA-dependent RNA polyme... 479 e-133
ref|XP_004135802.1| PREDICTED: probable RNA-dependent RNA polyme... 428 e-117
ref|NP_179581.2| RNA-dependent RNA polymerase-like protein [Arab... 424 e-116
gb|AAC62125.1| hypothetical protein [Arabidopsis thaliana] 424 e-116
>emb|CBI28010.3| unnamed protein product [Vitis vinifera]
Length = 929
Score = 479 bits (1234), Expect = e-133
Identities = 241/454 (53%), Positives = 321/454 (70%), Gaps = 2/454 (0%)
Frame = +1
Query: 1 VKGTLLVNKKLKPSTIQVRPSMIKVRKDSTLPDTKSFNSLEVVAVSHKPKAAKLSKQLIA 180
VKGTLL+N+KL P TIQ+RPSMIKV D L DT++ NS+E+ S++P+ + LSK LIA
Sbjct: 402 VKGTLLLNRKLPPRTIQIRPSMIKVETDPKLSDTQTVNSVEINGTSNQPRRSYLSKYLIA 461
Query: 181 LLSIGGVPDAYFLGLLESTLKDAQGVCFDPRTAFRVANTYQHIDDSGICIDMFGARIPLN 360
LLS GGVP+ YF+ LL+ L+DA V R A RV+ + +DDS I M + IP++
Sbjct: 462 LLSYGGVPNEYFMNLLKDALEDAPSVQSSKRAALRVSLRFGEMDDS-IVTRMILSGIPID 520
Query: 361 EPYFQYRLSQLAKEERKGLGEGKIPISESFYLMGTTDPTGSLNSDEVCIILENGQISGKV 540
EP+ + LS + EERKGL GK+P+++ FYLMGT DPTG+L SDEVCIIL++GQ+ G+V
Sbjct: 521 EPFLHHCLSFMVNEERKGLRVGKLPVNDCFYLMGTADPTGTLKSDEVCIILDHGQVQGRV 580
Query: 541 LVYRNPGLHFGDIHVLNARYVEELEGYIGNAKYAIFFSTKGRRSVANEIANGDFDGDLYW 720
LVY++PGLHFGDIHVLNA YVE LE ++GNAKYAIFF KG RS+A+E+AN DFDGD+YW
Sbjct: 581 LVYKHPGLHFGDIHVLNATYVEALEEFVGNAKYAIFFPIKGPRSLADEMANSDFDGDMYW 640
Query: 721 VSRNPQVLAHFKACEPWKRSYSTPSAINKKPSDFSSEELEHELLKMLFSAKTHNMAA-GI 897
VSRN Q+L +F+A EPW R ST +K+P+DFS +ELEHEL ++ + + +A G+
Sbjct: 641 VSRNQQLLQYFRASEPWMRKRSTRHVPSKRPTDFSPDELEHELFQLFLTTRFQTSSAIGM 700
Query: 898 AADSWMAFMDRYMILQDDDADEKHXXXXXXXXXXXXXXXALDAAKSGKKVVIPHALRATH 1077
AAD+W+ FMDR + L+DD +DEK ALDA KSG KV + L+A
Sbjct: 701 AADNWLVFMDRLLTLRDDCSDEKECLKRKMLELTDIYYDALDAPKSGMKVNVSKELKAEK 760
Query: 1078 FPHHMGRKPEYHSTSVLGLIYDGFQSCKNEKLPIQEIWNLPYFDI-SIPSSCLNLWKERY 1254
FPH MGR+ YHSTS+LG IYD +S + E +EIW LP F+I ++P +CL WK+RY
Sbjct: 761 FPHFMGRESSYHSTSILGQIYDAVESFQPENQSTKEIWRLPLFNIDAVPQACLRSWKDRY 820
Query: 1255 EAYRRDMSNALRYNDQSKNHAANTVIIKYKQMLY 1356
+ YR +M+ AL++ ++K+ A VI KYKQ+LY
Sbjct: 821 DQYRSEMAAALQHGGETKDEYAAEVINKYKQILY 854
>ref|XP_002280491.1| PREDICTED: probable RNA-dependent RNA polymerase 5-like [Vitis
vinifera]
Length = 943
Score = 479 bits (1234), Expect = e-133
Identities = 241/454 (53%), Positives = 321/454 (70%), Gaps = 2/454 (0%)
Frame = +1
Query: 1 VKGTLLVNKKLKPSTIQVRPSMIKVRKDSTLPDTKSFNSLEVVAVSHKPKAAKLSKQLIA 180
VKGTLL+N+KL P TIQ+RPSMIKV D L DT++ NS+E+ S++P+ + LSK LIA
Sbjct: 416 VKGTLLLNRKLPPRTIQIRPSMIKVETDPKLSDTQTVNSVEINGTSNQPRRSYLSKYLIA 475
Query: 181 LLSIGGVPDAYFLGLLESTLKDAQGVCFDPRTAFRVANTYQHIDDSGICIDMFGARIPLN 360
LLS GGVP+ YF+ LL+ L+DA V R A RV+ + +DDS I M + IP++
Sbjct: 476 LLSYGGVPNEYFMNLLKDALEDAPSVQSSKRAALRVSLRFGEMDDS-IVTRMILSGIPID 534
Query: 361 EPYFQYRLSQLAKEERKGLGEGKIPISESFYLMGTTDPTGSLNSDEVCIILENGQISGKV 540
EP+ + LS + EERKGL GK+P+++ FYLMGT DPTG+L SDEVCIIL++GQ+ G+V
Sbjct: 535 EPFLHHCLSFMVNEERKGLRVGKLPVNDCFYLMGTADPTGTLKSDEVCIILDHGQVQGRV 594
Query: 541 LVYRNPGLHFGDIHVLNARYVEELEGYIGNAKYAIFFSTKGRRSVANEIANGDFDGDLYW 720
LVY++PGLHFGDIHVLNA YVE LE ++GNAKYAIFF KG RS+A+E+AN DFDGD+YW
Sbjct: 595 LVYKHPGLHFGDIHVLNATYVEALEEFVGNAKYAIFFPIKGPRSLADEMANSDFDGDMYW 654
Query: 721 VSRNPQVLAHFKACEPWKRSYSTPSAINKKPSDFSSEELEHELLKMLFSAKTHNMAA-GI 897
VSRN Q+L +F+A EPW R ST +K+P+DFS +ELEHEL ++ + + +A G+
Sbjct: 655 VSRNQQLLQYFRASEPWMRKRSTRHVPSKRPTDFSPDELEHELFQLFLTTRFQTSSAIGM 714
Query: 898 AADSWMAFMDRYMILQDDDADEKHXXXXXXXXXXXXXXXALDAAKSGKKVVIPHALRATH 1077
AAD+W+ FMDR + L+DD +DEK ALDA KSG KV + L+A
Sbjct: 715 AADNWLVFMDRLLTLRDDCSDEKECLKRKMLELTDIYYDALDAPKSGMKVNVSKELKAEK 774
Query: 1078 FPHHMGRKPEYHSTSVLGLIYDGFQSCKNEKLPIQEIWNLPYFDI-SIPSSCLNLWKERY 1254
FPH MGR+ YHSTS+LG IYD +S + E +EIW LP F+I ++P +CL WK+RY
Sbjct: 775 FPHFMGRESSYHSTSILGQIYDAVESFQPENQSTKEIWRLPLFNIDAVPQACLRSWKDRY 834
Query: 1255 EAYRRDMSNALRYNDQSKNHAANTVIIKYKQMLY 1356
+ YR +M+ AL++ ++K+ A VI KYKQ+LY
Sbjct: 835 DQYRSEMAAALQHGGETKDEYAAEVINKYKQILY 868
>ref|XP_004135802.1| PREDICTED: probable RNA-dependent RNA polymerase 5-like [Cucumis
sativus]
Length = 1056
Score = 428 bits (1101), Expect = e-117
Identities = 231/455 (50%), Positives = 303/455 (66%), Gaps = 3/455 (0%)
Frame = +1
Query: 1 VKGTLLVNKKLKPSTIQVRPSMIKVRKDSTLPDTKSFNSLEVVAVSHKPKAAKLSKQLIA 180
VKGT L+NK+L P TIQ+R SMIKV D L + ++ NSLE+V S+ PK LS+ LIA
Sbjct: 530 VKGTFLLNKQLPPRTIQIRDSMIKVEIDPDLENFETENSLELVGTSNPPKRTFLSRNLIA 589
Query: 181 LLSIGGVPDAYFLGLLESTLKDAQGVCFDPRTAFRVANTYQHIDDSGICIDMFGARIPLN 360
LL+ GGVP YF+ +L LKD QGV R A RV+ +DD + M A IPL+
Sbjct: 590 LLNYGGVPREYFMNILVDALKDVQGVFSSKRAALRVSINNGEMDDF-LVARMILAGIPLD 648
Query: 361 EPYFQYRLSQLAKEERKGLGEGKIPISESFYLMGTTDPTGSLNSDEVCIILENGQISGKV 540
E Y QYRLS L KEE+K L G++ + E +YLMGT DPT +L S EVC+IL NGQI+GKV
Sbjct: 649 ESYLQYRLSVLLKEEKKSLKSGRLHVPECYYLMGTVDPTFTLESGEVCVILYNGQINGKV 708
Query: 541 LVYRNPGLHFGDIHVLNARYVEELEGYIGNAKYAIFFSTKGRRSVANEIANGDFDGDLYW 720
LVYRNPGLHFGDIHVL A+YVE+L +GNAKYAIFFS+KG RSVA+EIA GDFDGD+YW
Sbjct: 709 LVYRNPGLHFGDIHVLTAKYVEKLVPVVGNAKYAIFFSSKGPRSVADEIAGGDFDGDMYW 768
Query: 721 VSRNPQVLAHFKACEPWKRSYSTPSAINKKPSDFSSEELEHELLKMLFSAKTH-NMAAGI 897
VSRN Q+L +F+ CEPW+ S ST NKKP +FS++ELE+EL K+ S + + A +
Sbjct: 769 VSRNSQLLEYFRPCEPWRPSPSTEVVTNKKPKEFSADELENELFKLFLSTRFQPSYAKSV 828
Query: 898 AADSWMAFMDRYMILQDDDADEKHXXXXXXXXXXXXXXXALDA-AKSGKKVVIPHALRAT 1074
AAD+W+A MD++++L ++ +E++ ALDA K GKK+ +P L+A
Sbjct: 829 AADNWLALMDQFLMLGEERKEERNCIRAKILQLINIYYDALDAPKKGGKKIEVPKHLKAG 888
Query: 1075 HFPHHMGR-KPEYHSTSVLGLIYDGFQSCKNEKLPIQEIWNLPYFDISIPSSCLNLWKER 1251
PH M R K Y STS+LG I+D + E++P E+ LP F+ +P WK
Sbjct: 889 TLPHFMERGKNSYVSTSILGQIFD-TANMYQEEVPNIEVQKLPCFEEELPEYIFMKWKFL 947
Query: 1252 YEAYRRDMSNALRYNDQSKNHAANTVIIKYKQMLY 1356
YE YR+DM +A++ + +KN AA I KYK++LY
Sbjct: 948 YELYRKDMVDAMQLDPDAKNIAAEATIKKYKEILY 982
>ref|NP_179581.2| RNA-dependent RNA polymerase-like protein [Arabidopsis thaliana]
gi|322967566|sp|O82190.2|RDR3_ARATH RecName:
Full=Probable RNA-dependent RNA polymerase 3;
Short=AtRDRP3; AltName: Full=RNA-directed RNA polymerase
3 gi|330251848|gb|AEC06942.1| RNA-dependent RNA
polymerase-like protein [Arabidopsis thaliana]
Length = 992
Score = 424 bits (1089), Expect = e-116
Identities = 231/459 (50%), Positives = 296/459 (64%), Gaps = 7/459 (1%)
Frame = +1
Query: 1 VKGTLLVNKKLKPSTIQVRPSMIKVRKDSTLPDTKSFNSLEVVAVSHKPKAAKLSKQLIA 180
VKGT L NKKL P T+QVRPSMIKV +D TL + +FNSLEVV S+ P+ A+LS+ L+A
Sbjct: 464 VKGTFLTNKKLPPRTVQVRPSMIKVYEDRTLSNLSTFNSLEVVTTSNPPRKARLSRNLVA 523
Query: 181 LLSIGGVPDAYFLGLLESTLKDAQGVCFDPRTAFRVANTYQHIDDSGICIDMFGARIPLN 360
LLS GGVP+ +FL +L +TL++++ + + R AF+ A Y D DM IPL+
Sbjct: 524 LLSYGGVPNDFFLNILRNTLEESKTIFYSERAAFKAAINY---GDDQYTADMILVGIPLD 580
Query: 361 EPYFQYRLSQLAKEERKGLGEGKIPISESFYLMGTTDPTGSLNSDEVCIILENGQISGKV 540
EPY + RLS L K ER L G+ PI ES+Y+MGT DPTG L +E+C+IL +GQISG V
Sbjct: 581 EPYLKDRLSYLLKTERNALKAGRFPIDESYYIMGTVDPTGELKENEICVILHSGQISGDV 640
Query: 541 LVYRNPGLHFGDIHVLNARYVEELEGYIGNAKYAIFFSTKGRRSVANEIANGDFDGDLYW 720
LVYRNPGLHFGDIHVL A YV+ LE Y+GNAK+A+FF KG RS+ +EIA GDFDGD+Y+
Sbjct: 641 LVYRNPGLHFGDIHVLKATYVKALEDYVGNAKFAVFFPQKGPRSLGDEIAGGDFDGDMYF 700
Query: 721 VSRNPQVLAHFKACEPWKRSYSTPSAI--NKKPSDFSSEELEHELLKMLFSAK-THNMAA 891
+SRNP++L HFK EPW S S PS I +KPS+ S EELE EL KM A+
Sbjct: 701 ISRNPKLLEHFKPSEPWVSS-SKPSKIYCGRKPSELSEEELEEELFKMFLKARFCKRDVI 759
Query: 892 GIAADSWMAFMDRYMILQDDDADEKHXXXXXXXXXXXXXXXALDAAKSGKKVVIPHALRA 1071
G+AAD W+ MD ++ L D+ A EK+ ALDA K G KV +P L
Sbjct: 760 GMAADCWLGIMDPFLTLGDESAKEKYERKKNILKLIDIYYDALDAPKKGAKVDLPPDLEI 819
Query: 1072 THFPHHMGRKP--EYHSTSVLGLIYDGFQSCKNEKLPIQEIWNLPYF-DISIPSSCLNLW 1242
+FPH+M R P ++ STS+LGLI+D S E+ P EI L YF D +P S ++ +
Sbjct: 820 KNFPHYMERDPKRDFRSTSILGLIFDTVDSHNAEEPPPSEISKLWYFEDEPVPKSHMDKF 879
Query: 1243 KERYEAYRRDMSNALRYNDQSK-NHAANTVIIKYKQMLY 1356
YE YR +MS A+ D+ K N N VI +YKQ Y
Sbjct: 880 TSWYENYRSEMSQAMMETDKVKRNQLTNEVIQRYKQDFY 918
>gb|AAC62125.1| hypothetical protein [Arabidopsis thaliana]
Length = 966
Score = 424 bits (1089), Expect = e-116
Identities = 231/459 (50%), Positives = 296/459 (64%), Gaps = 7/459 (1%)
Frame = +1
Query: 1 VKGTLLVNKKLKPSTIQVRPSMIKVRKDSTLPDTKSFNSLEVVAVSHKPKAAKLSKQLIA 180
VKGT L NKKL P T+QVRPSMIKV +D TL + +FNSLEVV S+ P+ A+LS+ L+A
Sbjct: 438 VKGTFLTNKKLPPRTVQVRPSMIKVYEDRTLSNLSTFNSLEVVTTSNPPRKARLSRNLVA 497
Query: 181 LLSIGGVPDAYFLGLLESTLKDAQGVCFDPRTAFRVANTYQHIDDSGICIDMFGARIPLN 360
LLS GGVP+ +FL +L +TL++++ + + R AF+ A Y D DM IPL+
Sbjct: 498 LLSYGGVPNDFFLNILRNTLEESKTIFYSERAAFKAAINY---GDDQYTADMILVGIPLD 554
Query: 361 EPYFQYRLSQLAKEERKGLGEGKIPISESFYLMGTTDPTGSLNSDEVCIILENGQISGKV 540
EPY + RLS L K ER L G+ PI ES+Y+MGT DPTG L +E+C+IL +GQISG V
Sbjct: 555 EPYLKDRLSYLLKTERNALKAGRFPIDESYYIMGTVDPTGELKENEICVILHSGQISGDV 614
Query: 541 LVYRNPGLHFGDIHVLNARYVEELEGYIGNAKYAIFFSTKGRRSVANEIANGDFDGDLYW 720
LVYRNPGLHFGDIHVL A YV+ LE Y+GNAK+A+FF KG RS+ +EIA GDFDGD+Y+
Sbjct: 615 LVYRNPGLHFGDIHVLKATYVKALEDYVGNAKFAVFFPQKGPRSLGDEIAGGDFDGDMYF 674
Query: 721 VSRNPQVLAHFKACEPWKRSYSTPSAI--NKKPSDFSSEELEHELLKMLFSAK-THNMAA 891
+SRNP++L HFK EPW S S PS I +KPS+ S EELE EL KM A+
Sbjct: 675 ISRNPKLLEHFKPSEPWVSS-SKPSKIYCGRKPSELSEEELEEELFKMFLKARFCKRDVI 733
Query: 892 GIAADSWMAFMDRYMILQDDDADEKHXXXXXXXXXXXXXXXALDAAKSGKKVVIPHALRA 1071
G+AAD W+ MD ++ L D+ A EK+ ALDA K G KV +P L
Sbjct: 734 GMAADCWLGIMDPFLTLGDESAKEKYERKKNILKLIDIYYDALDAPKKGAKVDLPPDLEI 793
Query: 1072 THFPHHMGRKP--EYHSTSVLGLIYDGFQSCKNEKLPIQEIWNLPYF-DISIPSSCLNLW 1242
+FPH+M R P ++ STS+LGLI+D S E+ P EI L YF D +P S ++ +
Sbjct: 794 KNFPHYMERDPKRDFRSTSILGLIFDTVDSHNAEEPPPSEISKLWYFEDEPVPKSHMDKF 853
Query: 1243 KERYEAYRRDMSNALRYNDQSK-NHAANTVIIKYKQMLY 1356
YE YR +MS A+ D+ K N N VI +YKQ Y
Sbjct: 854 TSWYENYRSEMSQAMMETDKVKRNQLTNEVIQRYKQDFY 892