BLASTX nr result

ID: Atractylodes21_contig00003911 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00003911
         (1123 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI34587.3| unnamed protein product [Vitis vinifera]              282   1e-73
ref|XP_002280081.1| PREDICTED: mediator of RNA polymerase II tra...   282   1e-73
ref|XP_002299427.1| predicted protein [Populus trichocarpa] gi|2...   274   3e-71
ref|XP_002527873.1| nut2, putative [Ricinus communis] gi|2235327...   273   4e-71
ref|XP_002303692.1| predicted protein [Populus trichocarpa] gi|2...   266   7e-69

>emb|CBI34587.3| unnamed protein product [Vitis vinifera]
          Length = 284

 Score =  282 bits (721), Expect = 1e-73
 Identities = 140/157 (89%), Positives = 151/157 (96%)
 Frame = -3

Query: 641 DDPKQNLNQVINSIQKTLGIIHQLYLTVSSFNVSSQLPLLQRLNTLVMEMDNMTKLSEKC 462
           +DPKQNLNQVINSIQKTLG++HQLYLTVSSFNV+SQLPLLQRLN LV E+DNMTKLSEKC
Sbjct: 128 EDPKQNLNQVINSIQKTLGLLHQLYLTVSSFNVASQLPLLQRLNALVSELDNMTKLSEKC 187

Query: 461 NIQVPMEVLNLIDDGKNPDEFTRDVLNSCIAKNQITKGKTDAFKALRRHLLEELEQAFPD 282
           NIQVPMEVLNLID+GKNPDEFTRDVLNSCIAKNQITKGKTD+FK LRRHLLEELEQAFPD
Sbjct: 188 NIQVPMEVLNLIDEGKNPDEFTRDVLNSCIAKNQITKGKTDSFKGLRRHLLEELEQAFPD 247

Query: 281 EVEDYREIRASSAAESIRLAQAQSILPNGDVKVKPEM 171
           EVE YREIRA+SAAES RLAQAQS+LPNGD+KVK E+
Sbjct: 248 EVESYREIRAASAAESKRLAQAQSVLPNGDLKVKTEL 284


>ref|XP_002280081.1| PREDICTED: mediator of RNA polymerase II transcription subunit 10
           [Vitis vinifera]
          Length = 194

 Score =  282 bits (721), Expect = 1e-73
 Identities = 140/157 (89%), Positives = 151/157 (96%)
 Frame = -3

Query: 641 DDPKQNLNQVINSIQKTLGIIHQLYLTVSSFNVSSQLPLLQRLNTLVMEMDNMTKLSEKC 462
           +DPKQNLNQVINSIQKTLG++HQLYLTVSSFNV+SQLPLLQRLN LV E+DNMTKLSEKC
Sbjct: 38  EDPKQNLNQVINSIQKTLGLLHQLYLTVSSFNVASQLPLLQRLNALVSELDNMTKLSEKC 97

Query: 461 NIQVPMEVLNLIDDGKNPDEFTRDVLNSCIAKNQITKGKTDAFKALRRHLLEELEQAFPD 282
           NIQVPMEVLNLID+GKNPDEFTRDVLNSCIAKNQITKGKTD+FK LRRHLLEELEQAFPD
Sbjct: 98  NIQVPMEVLNLIDEGKNPDEFTRDVLNSCIAKNQITKGKTDSFKGLRRHLLEELEQAFPD 157

Query: 281 EVEDYREIRASSAAESIRLAQAQSILPNGDVKVKPEM 171
           EVE YREIRA+SAAES RLAQAQS+LPNGD+KVK E+
Sbjct: 158 EVESYREIRAASAAESKRLAQAQSVLPNGDLKVKTEL 194


>ref|XP_002299427.1| predicted protein [Populus trichocarpa] gi|222846685|gb|EEE84232.1|
           predicted protein [Populus trichocarpa]
          Length = 190

 Score =  274 bits (701), Expect = 3e-71
 Identities = 136/157 (86%), Positives = 147/157 (93%)
 Frame = -3

Query: 641 DDPKQNLNQVINSIQKTLGIIHQLYLTVSSFNVSSQLPLLQRLNTLVMEMDNMTKLSEKC 462
           DDPKQNLNQVINSIQKTLG++HQLYLTVSSFN +SQLPLLQRLN LV E+DNM KLSEKC
Sbjct: 34  DDPKQNLNQVINSIQKTLGLLHQLYLTVSSFNTASQLPLLQRLNGLVTELDNMVKLSEKC 93

Query: 461 NIQVPMEVLNLIDDGKNPDEFTRDVLNSCIAKNQITKGKTDAFKALRRHLLEELEQAFPD 282
           NIQVPMEVLNLIDDGKNPDEF+RDV+NSCIAKNQ+TKGKTDAFK+LR+HLLEELEQ FPD
Sbjct: 94  NIQVPMEVLNLIDDGKNPDEFSRDVINSCIAKNQVTKGKTDAFKSLRKHLLEELEQTFPD 153

Query: 281 EVEDYREIRASSAAESIRLAQAQSILPNGDVKVKPEM 171
           EVE YREIRA SAAE+ RLAQAQS LPNGDVKVK E+
Sbjct: 154 EVESYREIRAMSAAEAKRLAQAQSSLPNGDVKVKAEL 190


>ref|XP_002527873.1| nut2, putative [Ricinus communis] gi|223532724|gb|EEF34504.1| nut2,
           putative [Ricinus communis]
          Length = 187

 Score =  273 bits (699), Expect = 4e-71
 Identities = 136/157 (86%), Positives = 146/157 (92%)
 Frame = -3

Query: 641 DDPKQNLNQVINSIQKTLGIIHQLYLTVSSFNVSSQLPLLQRLNTLVMEMDNMTKLSEKC 462
           DDPKQNLN VINSIQKTLG++HQLYLTVSSFN +SQLPLLQRLN LV+E+D M KLSEKC
Sbjct: 31  DDPKQNLNNVINSIQKTLGLLHQLYLTVSSFNTASQLPLLQRLNGLVLELDKMAKLSEKC 90

Query: 461 NIQVPMEVLNLIDDGKNPDEFTRDVLNSCIAKNQITKGKTDAFKALRRHLLEELEQAFPD 282
           NIQVP+EVLNLIDDGKNPDEFTRDV+NSCIAKNQ+TKGKTDAFK LR+HLLEELEQAFPD
Sbjct: 91  NIQVPLEVLNLIDDGKNPDEFTRDVINSCIAKNQVTKGKTDAFKGLRKHLLEELEQAFPD 150

Query: 281 EVEDYREIRASSAAESIRLAQAQSILPNGDVKVKPEM 171
           EVE YREIRA SAAES RLAQAQS LPNGDVKVK E+
Sbjct: 151 EVESYREIRAISAAESKRLAQAQSSLPNGDVKVKSEL 187


>ref|XP_002303692.1| predicted protein [Populus trichocarpa] gi|222841124|gb|EEE78671.1|
           predicted protein [Populus trichocarpa]
          Length = 185

 Score =  266 bits (680), Expect = 7e-69
 Identities = 132/156 (84%), Positives = 143/156 (91%)
 Frame = -3

Query: 641 DDPKQNLNQVINSIQKTLGIIHQLYLTVSSFNVSSQLPLLQRLNTLVMEMDNMTKLSEKC 462
           DDPKQNLNQVI+SIQKTLG +HQLYLTVSSFN +SQLPLLQRLN LV E+DNM KLSE+C
Sbjct: 29  DDPKQNLNQVIDSIQKTLGQLHQLYLTVSSFNTASQLPLLQRLNGLVTELDNMVKLSERC 88

Query: 461 NIQVPMEVLNLIDDGKNPDEFTRDVLNSCIAKNQITKGKTDAFKALRRHLLEELEQAFPD 282
           NIQVPMEVLNLIDDGKNPDEFTR V+NSCI KNQ+TKGKTD FK+LR+HLLEELEQ FPD
Sbjct: 89  NIQVPMEVLNLIDDGKNPDEFTRGVINSCITKNQVTKGKTDGFKSLRKHLLEELEQTFPD 148

Query: 281 EVEDYREIRASSAAESIRLAQAQSILPNGDVKVKPE 174
           EVE YREIRA SAAE+ RLAQ+QS LPNGDVKVKPE
Sbjct: 149 EVESYREIRAMSAAEAKRLAQSQSSLPNGDVKVKPE 184


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