BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00003802
         (1140 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI33876.3| unnamed protein product [Vitis vinifera]              216   6e-54
ref|XP_002279685.1| PREDICTED: 29 kDa ribonucleoprotein B, chlor...   216   6e-54
ref|XP_002326529.1| predicted protein [Populus trichocarpa] gi|2...   203   6e-50
gb|ABK96729.1| unknown [Populus trichocarpa x Populus deltoides]      203   6e-50
ref|NP_181084.1| RNA-binding (RRM/RBD/RNP motifs) family protein...   202   1e-49

>emb|CBI33876.3| unnamed protein product [Vitis vinifera]
          Length = 258

 Score =  216 bits (551), Expect = 6e-54
 Identities = 115/210 (54%), Positives = 143/210 (68%), Gaps = 5/210 (2%)
 Frame = +3

Query: 204 STKFRVLSSSSAAAIQEEVSVEQEEKPQIEILQKRLFVLNLPWSYSVDELKNLFGECGTV 383
           +TKF     SS   I+ E   EQ ++P     +++LFVLNLPWS SV ++KNLFGECGTV
Sbjct: 29  TTKFSFELCSSVQEIEVEAKPEQTQEPN---QKRKLFVLNLPWSLSVVDIKNLFGECGTV 85

Query: 384 EDAEIITRKKDGKSRGYAFVTMASREEALSVIQKYDSYELMGRIIRVEFAKDSKKTXXXX 563
            D EII ++KDG+SRGYAFVTM S EEA +V++K+DSYEL GRIIRVEFAK  KK     
Sbjct: 86  TDVEII-KQKDGRSRGYAFVTMDSGEEAQAVVEKFDSYELSGRIIRVEFAKRFKKPSPPP 144

Query: 564 XXXX-----GEKRYKLYVSNLAWKARANHLRDFFAAEFNPTSTRVVFETPEGRSAGYGFV 728
                    GE R+KLYVSNLAWK R+ HLR+FF++ FNP S RVVF++P GRS GYGF 
Sbjct: 145 PPPPAGPPAGETRHKLYVSNLAWKVRSTHLREFFSSNFNPVSVRVVFDSPSGRSGGYGFA 204

Query: 729 TFXXXXXXXXXXXXFNGKELLGRPITVAFS 818
           +F             +GKEL+GRP+ + FS
Sbjct: 205 SFATKEEAEAAISALDGKELMGRPVHLKFS 234


>ref|XP_002279685.1| PREDICTED: 29 kDa ribonucleoprotein B, chloroplastic [Vitis
           vinifera]
          Length = 288

 Score =  216 bits (551), Expect = 6e-54
 Identities = 115/210 (54%), Positives = 143/210 (68%), Gaps = 5/210 (2%)
 Frame = +3

Query: 204 STKFRVLSSSSAAAIQEEVSVEQEEKPQIEILQKRLFVLNLPWSYSVDELKNLFGECGTV 383
           +TKF     SS   I+ E   EQ ++P     +++LFVLNLPWS SV ++KNLFGECGTV
Sbjct: 59  TTKFSFELCSSVQEIEVEAKPEQTQEPN---QKRKLFVLNLPWSLSVVDIKNLFGECGTV 115

Query: 384 EDAEIITRKKDGKSRGYAFVTMASREEALSVIQKYDSYELMGRIIRVEFAKDSKKTXXXX 563
            D EII ++KDG+SRGYAFVTM S EEA +V++K+DSYEL GRIIRVEFAK  KK     
Sbjct: 116 TDVEII-KQKDGRSRGYAFVTMDSGEEAQAVVEKFDSYELSGRIIRVEFAKRFKKPSPPP 174

Query: 564 XXXX-----GEKRYKLYVSNLAWKARANHLRDFFAAEFNPTSTRVVFETPEGRSAGYGFV 728
                    GE R+KLYVSNLAWK R+ HLR+FF++ FNP S RVVF++P GRS GYGF 
Sbjct: 175 PPPPAGPPAGETRHKLYVSNLAWKVRSTHLREFFSSNFNPVSVRVVFDSPSGRSGGYGFA 234

Query: 729 TFXXXXXXXXXXXXFNGKELLGRPITVAFS 818
           +F             +GKEL+GRP+ + FS
Sbjct: 235 SFATKEEAEAAISALDGKELMGRPVHLKFS 264


>ref|XP_002326529.1| predicted protein [Populus trichocarpa] gi|222833851|gb|EEE72328.1|
           predicted protein [Populus trichocarpa]
          Length = 294

 Score =  203 bits (517), Expect = 6e-50
 Identities = 108/230 (46%), Positives = 149/230 (64%), Gaps = 6/230 (2%)
 Frame = +3

Query: 150 PISTTKLSQKSYPPPHPISTKFRVLSSSSAAAIQEEVSVEQEEKPQIEILQKRLFVLNLP 329
           P+ +    Q S    HP S        S+   +  E++ E+EE  +   L+++LFV+NLP
Sbjct: 44  PLISHNFPQPSLTQNHPRSKSLCFQLCSTVQEVTVEITPEEEEIQEAN-LKRKLFVVNLP 102

Query: 330 WSYSVDELKNLFGECGTVEDAEIITRKKDGKSRGYAFVTMASREEALSVIQKYDSYELMG 509
           WS+SV ++K+LFG+CGTV D EII ++K+G+SRG+AFVTM + EEA + I K++S E+ G
Sbjct: 103 WSFSVVDIKDLFGQCGTVSDVEII-KQKNGRSRGFAFVTMTTGEEAQAAIDKFNSLEVSG 161

Query: 510 RIIRVEFAKDSKKTXXXXXXXX------GEKRYKLYVSNLAWKARANHLRDFFAAEFNPT 671
           RIIRVEFAK  ++               GE R+KLY+SNLAWK R +HLR+FF+   NP 
Sbjct: 162 RIIRVEFAKRLRRPPSPRLPGTPADIPAGETRHKLYISNLAWKVRGSHLREFFSTNCNPV 221

Query: 672 STRVVFETPEGRSAGYGFVTFXXXXXXXXXXXXFNGKELLGRPITVAFSE 821
           S+RVVF+ P GRS+GYGFV+F            F+GKEL+GRPI + FSE
Sbjct: 222 SSRVVFDGPAGRSSGYGFVSFATREEAVAAISAFSGKELMGRPIRLKFSE 271



 Score = 57.0 bits (136), Expect = 9e-06
 Identities = 27/78 (34%), Positives = 44/78 (56%)
 Frame = +3

Query: 306 RLFVLNLPWSYSVDELKNLFGECGTVEDAEIITRKKDGKSRGYAFVTMASREEALSVIQK 485
           +L++ NL W      L+  F        + ++     G+S GY FV+ A+REEA++ I  
Sbjct: 195 KLYISNLAWKVRGSHLREFFSTNCNPVSSRVVFDGPAGRSSGYGFVSFATREEAVAAISA 254

Query: 486 YDSYELMGRIIRVEFAKD 539
           +   ELMGR IR++F++D
Sbjct: 255 FSGKELMGRPIRLKFSED 272


>gb|ABK96729.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 294

 Score =  203 bits (517), Expect = 6e-50
 Identities = 108/230 (46%), Positives = 149/230 (64%), Gaps = 6/230 (2%)
 Frame = +3

Query: 150 PISTTKLSQKSYPPPHPISTKFRVLSSSSAAAIQEEVSVEQEEKPQIEILQKRLFVLNLP 329
           P+ +    Q S    HP S        S+   +  E++ E+EE  +   L+++LFV+NLP
Sbjct: 44  PLISHNFPQPSLTQNHPRSKSLCFQLCSTVQEVTMEITPEEEEIQEAN-LKRKLFVVNLP 102

Query: 330 WSYSVDELKNLFGECGTVEDAEIITRKKDGKSRGYAFVTMASREEALSVIQKYDSYELMG 509
           WS+SV ++K+LFG+CGTV D EII ++K+G+SRG+AFVTM + EEA + I K++S E+ G
Sbjct: 103 WSFSVVDIKDLFGQCGTVSDVEII-KQKNGRSRGFAFVTMTTGEEAQAAIDKFNSLEVSG 161

Query: 510 RIIRVEFAKDSKKTXXXXXXXX------GEKRYKLYVSNLAWKARANHLRDFFAAEFNPT 671
           RIIRVEFAK  ++               GE R+KLY+SNLAWK R +HLR+FF+   NP 
Sbjct: 162 RIIRVEFAKRLRRPPSPRLPGTPADIPAGETRHKLYISNLAWKVRGSHLREFFSTNCNPV 221

Query: 672 STRVVFETPEGRSAGYGFVTFXXXXXXXXXXXXFNGKELLGRPITVAFSE 821
           S+RVVF+ P GRS+GYGFV+F            F+GKEL+GRPI + FSE
Sbjct: 222 SSRVVFDGPAGRSSGYGFVSFATREEAVAAISAFSGKELMGRPIRLKFSE 271



 Score = 57.0 bits (136), Expect = 9e-06
 Identities = 27/78 (34%), Positives = 44/78 (56%)
 Frame = +3

Query: 306 RLFVLNLPWSYSVDELKNLFGECGTVEDAEIITRKKDGKSRGYAFVTMASREEALSVIQK 485
           +L++ NL W      L+  F        + ++     G+S GY FV+ A+REEA++ I  
Sbjct: 195 KLYISNLAWKVRGSHLREFFSTNCNPVSSRVVFDGPAGRSSGYGFVSFATREEAVAAISA 254

Query: 486 YDSYELMGRIIRVEFAKD 539
           +   ELMGR IR++F++D
Sbjct: 255 FSGKELMGRPIRLKFSED 272


>ref|NP_181084.1| RNA-binding (RRM/RBD/RNP motifs) family protein [Arabidopsis
           thaliana] gi|3608147|gb|AAC36180.1| putative chloroplast
           RNA binding protein precursor [Arabidopsis thaliana]
           gi|14596023|gb|AAK68739.1| putative chloroplast RNA
           binding protein precursor [Arabidopsis thaliana]
           gi|23198314|gb|AAN15684.1| putative chloroplast RNA
           binding protein precursor [Arabidopsis thaliana]
           gi|330254012|gb|AEC09106.1| RNA-binding (RRM/RBD/RNP
           motifs) family protein [Arabidopsis thaliana]
          Length = 308

 Score =  202 bits (515), Expect = 1e-49
 Identities = 113/242 (46%), Positives = 150/242 (61%), Gaps = 7/242 (2%)
 Frame = +3

Query: 222 LSSSSAAAIQEEVSVEQEEKPQIEILQKRLFVLNLPWSYSVDELKNLFGECGTVEDAEII 401
           ++    +A +E    E+ E+ Q   L+++LFV NLPWS SV+++  LFG+CGTV + EII
Sbjct: 68  VAEKETSADEETSQEEKTEETQNSNLKRKLFVFNLPWSMSVNDISELFGQCGTVNNVEII 127

Query: 402 TRKKDGKSRGYAFVTMASREEALSVIQKYDSYELMGRIIRVEFAKDSKKTXXXXXXXX-- 575
            R+KDGK+RG+AFVTMAS EEA + I K+D++++ GRII V FA+  KK           
Sbjct: 128 -RQKDGKNRGFAFVTMASGEEAQAAIDKFDTFQVSGRIISVSFARRFKKPTPKSPNDLPS 186

Query: 576 ---GEKRYKLYVSNLAWKARANHLRDFF-AAEFNPTSTRVVFETPEGRSAGYGFVTFXXX 743
              G+ R+KLYVSNLAWKAR+ HLR+ F AA+FNP S RVVF  PEGRS+GYGFV+F   
Sbjct: 187 PAPGDTRHKLYVSNLAWKARSTHLRELFTAADFNPVSARVVFADPEGRSSGYGFVSFATR 246

Query: 744 XXXXXXXXXFNGKELLGRPITVAFSERGA-XXXXXXXXXXXXXXQPAETETEDNTSNEQP 920
                     NGKE++GRPIT+ FS R A               +  +T  + NTS E  
Sbjct: 247 EEAENAITKLNGKEIMGRPITLKFSLRSASESEDGDSVEANNASEDGDTVEDKNTSEENI 306

Query: 921 AE 926
            E
Sbjct: 307 VE 308