BLASTX nr result

ID: Atractylodes21_contig00003695 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00003695
         (643 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002308466.1| predicted protein [Populus trichocarpa] gi|2...   149   3e-34
ref|XP_003625846.1| hypothetical protein MTR_7g104930 [Medicago ...   149   4e-34
gb|ADB02890.1| putative small nuclear ribonucleoprotein polypept...   149   4e-34
gb|ABK93558.1| unknown [Populus trichocarpa]                          149   6e-34
ref|XP_002282193.1| PREDICTED: probable small nuclear ribonucleo...   148   1e-33

>ref|XP_002308466.1| predicted protein [Populus trichocarpa] gi|222854442|gb|EEE91989.1|
           predicted protein [Populus trichocarpa]
          Length = 80

 Score =  149 bits (377), Expect = 3e-34
 Identities = 74/80 (92%), Positives = 78/80 (97%)
 Frame = -2

Query: 555 MSRSGQPPDLKKYMDKQLQIKLNANRTVVGTLRGFDQFMNLVIDNTVEVNGEEKNDIGMV 376
           MSRSGQPPDLKKYMDK+LQIKLNANR VVGTLRGFDQFMNLV+DNTVEVNG+EK DIGMV
Sbjct: 1   MSRSGQPPDLKKYMDKKLQIKLNANRMVVGTLRGFDQFMNLVVDNTVEVNGDEKTDIGMV 60

Query: 375 VIRGNSVVTVEALEPVSRAQ 316
           VIRGNSVVTVEALEPV+RAQ
Sbjct: 61  VIRGNSVVTVEALEPVNRAQ 80


>ref|XP_003625846.1| hypothetical protein MTR_7g104930 [Medicago truncatula]
           gi|87240819|gb|ABD32677.1| Like-Sm
           ribonucleoprotein-related, core [Medicago truncatula]
           gi|355500861|gb|AES82064.1| hypothetical protein
           MTR_7g104930 [Medicago truncatula]
          Length = 80

 Score =  149 bits (376), Expect = 4e-34
 Identities = 73/79 (92%), Positives = 77/79 (97%)
 Frame = -2

Query: 555 MSRSGQPPDLKKYMDKQLQIKLNANRTVVGTLRGFDQFMNLVIDNTVEVNGEEKNDIGMV 376
           MSRSGQPPDLKKYMDKQLQIKLNANR +VGTLRGFDQFMNLV+DNTVEVNG EKNDIGMV
Sbjct: 1   MSRSGQPPDLKKYMDKQLQIKLNANRMIVGTLRGFDQFMNLVVDNTVEVNGNEKNDIGMV 60

Query: 375 VIRGNSVVTVEALEPVSRA 319
           VIRGNSVVTVEALEPV+R+
Sbjct: 61  VIRGNSVVTVEALEPVNRS 79


>gb|ADB02890.1| putative small nuclear ribonucleoprotein polypeptide G/SNRNP-G
           [Jatropha curcas]
          Length = 80

 Score =  149 bits (376), Expect = 4e-34
 Identities = 73/80 (91%), Positives = 78/80 (97%)
 Frame = -2

Query: 555 MSRSGQPPDLKKYMDKQLQIKLNANRTVVGTLRGFDQFMNLVIDNTVEVNGEEKNDIGMV 376
           MSRSGQPPDLKKYMDK+LQIKLNANR VVGTLRGFDQFMNLV+DNTVEVNG+EKNDIGMV
Sbjct: 1   MSRSGQPPDLKKYMDKKLQIKLNANRMVVGTLRGFDQFMNLVVDNTVEVNGDEKNDIGMV 60

Query: 375 VIRGNSVVTVEALEPVSRAQ 316
           VIRGNSVVTVEALEPV++ Q
Sbjct: 61  VIRGNSVVTVEALEPVNKTQ 80


>gb|ABK93558.1| unknown [Populus trichocarpa]
          Length = 80

 Score =  149 bits (375), Expect = 6e-34
 Identities = 73/80 (91%), Positives = 78/80 (97%)
 Frame = -2

Query: 555 MSRSGQPPDLKKYMDKQLQIKLNANRTVVGTLRGFDQFMNLVIDNTVEVNGEEKNDIGMV 376
           MSRSGQPPDLKKYMDK+LQIKLNANR VVGTLRGFDQFMNLV+DNTVEVNG+EK DIGMV
Sbjct: 1   MSRSGQPPDLKKYMDKKLQIKLNANRMVVGTLRGFDQFMNLVVDNTVEVNGDEKTDIGMV 60

Query: 375 VIRGNSVVTVEALEPVSRAQ 316
           V+RGNSVVTVEALEPV+RAQ
Sbjct: 61  VLRGNSVVTVEALEPVNRAQ 80


>ref|XP_002282193.1| PREDICTED: probable small nuclear ribonucleoprotein G [Vitis
           vinifera] gi|297740131|emb|CBI30313.3| unnamed protein
           product [Vitis vinifera]
          Length = 80

 Score =  148 bits (373), Expect = 1e-33
 Identities = 74/80 (92%), Positives = 76/80 (95%)
 Frame = -2

Query: 555 MSRSGQPPDLKKYMDKQLQIKLNANRTVVGTLRGFDQFMNLVIDNTVEVNGEEKNDIGMV 376
           MSRSGQPPDLKKYMDK+LQIKLNANR VVGTLRGFDQFMNLV+DNTVEVNG EK DIGMV
Sbjct: 1   MSRSGQPPDLKKYMDKKLQIKLNANRMVVGTLRGFDQFMNLVVDNTVEVNGNEKTDIGMV 60

Query: 375 VIRGNSVVTVEALEPVSRAQ 316
           VIRGNSVVTVEALEPVSR Q
Sbjct: 61  VIRGNSVVTVEALEPVSRMQ 80


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