BLASTX nr result

ID: Atractylodes21_contig00003592 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00003592
         (1177 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270185.1| PREDICTED: high mobility group B protein 1 i...   103   6e-20
ref|XP_002269398.1| PREDICTED: high mobility group B protein 1 i...   103   6e-20
emb|CAJ38371.1| HMG-protein [Plantago major]                          103   6e-20
ref|XP_002279947.2| PREDICTED: high mobility group B protein 1-l...   102   1e-19
ref|NP_001238631.1| uncharacterized protein LOC100499704 [Glycin...    99   2e-18

>ref|XP_002270185.1| PREDICTED: high mobility group B protein 1 isoform 2 [Vitis
           vinifera]
          Length = 156

 Score =  103 bits (258), Expect = 6e-20
 Identities = 53/75 (70%), Positives = 58/75 (77%)
 Frame = -3

Query: 656 RPPSAFFVFLEEFRKTFKKENPTVKAVSAVGKAGGEKWKSLSXXXXXXXXXXXXXXKTDY 477
           RPPSAFFVFLEEFRK +K+E+P VKAVSAVGKAGGEKWKSLS              K+DY
Sbjct: 58  RPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLSEADKAPYEAKAAKRKSDY 117

Query: 476 EKLMKAYNQKQESMA 432
           EKLM AYN+KQESMA
Sbjct: 118 EKLMAAYNKKQESMA 132


>ref|XP_002269398.1| PREDICTED: high mobility group B protein 1 isoform 1 [Vitis
           vinifera] gi|147854340|emb|CAN83423.1| hypothetical
           protein VITISV_023376 [Vitis vinifera]
          Length = 166

 Score =  103 bits (258), Expect = 6e-20
 Identities = 53/75 (70%), Positives = 58/75 (77%)
 Frame = -3

Query: 656 RPPSAFFVFLEEFRKTFKKENPTVKAVSAVGKAGGEKWKSLSXXXXXXXXXXXXXXKTDY 477
           RPPSAFFVFLEEFRK +K+E+P VKAVSAVGKAGGEKWKSLS              K+DY
Sbjct: 58  RPPSAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLSEADKAPYEAKAAKRKSDY 117

Query: 476 EKLMKAYNQKQESMA 432
           EKLM AYN+KQESMA
Sbjct: 118 EKLMAAYNKKQESMA 132


>emb|CAJ38371.1| HMG-protein [Plantago major]
          Length = 212

 Score =  103 bits (258), Expect = 6e-20
 Identities = 52/75 (69%), Positives = 58/75 (77%)
 Frame = -3

Query: 656 RPPSAFFVFLEEFRKTFKKENPTVKAVSAVGKAGGEKWKSLSXXXXXXXXXXXXXXKTDY 477
           RPPSAFFVFLEEFR+TFKKENP +KAVSAVGKAGGEKWKSL+              K++Y
Sbjct: 101 RPPSAFFVFLEEFRQTFKKENPNIKAVSAVGKAGGEKWKSLTDAEKAPYEAKAAKRKSEY 160

Query: 476 EKLMKAYNQKQESMA 432
           EKLM AYN+KQES A
Sbjct: 161 EKLMNAYNKKQESSA 175


>ref|XP_002279947.2| PREDICTED: high mobility group B protein 1-like [Vitis vinifera]
           gi|147815135|emb|CAN74566.1| hypothetical protein
           VITISV_023651 [Vitis vinifera]
           gi|297740214|emb|CBI30396.3| unnamed protein product
           [Vitis vinifera]
          Length = 168

 Score =  102 bits (255), Expect = 1e-19
 Identities = 52/75 (69%), Positives = 56/75 (74%)
 Frame = -3

Query: 656 RPPSAFFVFLEEFRKTFKKENPTVKAVSAVGKAGGEKWKSLSXXXXXXXXXXXXXXKTDY 477
           RPPSAFFVFLEEFRK FKKENP VKAVSAVGKAGGE+WKSLS              K +Y
Sbjct: 58  RPPSAFFVFLEEFRKVFKKENPNVKAVSAVGKAGGERWKSLSEAEKAPYEAKAAKKKAEY 117

Query: 476 EKLMKAYNQKQESMA 432
           EK+M AYN+KQES A
Sbjct: 118 EKIMNAYNKKQESTA 132


>ref|NP_001238631.1| uncharacterized protein LOC100499704 [Glycine max]
           gi|255625939|gb|ACU13314.1| unknown [Glycine max]
          Length = 166

 Score = 99.0 bits (245), Expect = 2e-18
 Identities = 51/75 (68%), Positives = 55/75 (73%)
 Frame = -3

Query: 656 RPPSAFFVFLEEFRKTFKKENPTVKAVSAVGKAGGEKWKSLSXXXXXXXXXXXXXXKTDY 477
           RPPSAFFVFLEEFRKTFK ENP VKAVS VGKAGGEKWKSLS              K +Y
Sbjct: 55  RPPSAFFVFLEEFRKTFKAENPNVKAVSVVGKAGGEKWKSLSSAEKAPYESKAAKRKAEY 114

Query: 476 EKLMKAYNQKQESMA 432
           EKL+KAY++KQ S A
Sbjct: 115 EKLIKAYDKKQASSA 129


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