BLASTX nr result

ID: Atractylodes21_contig00003499 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00003499
         (962 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002262703.1| PREDICTED: dof zinc finger protein DOF4.6-li...   273   4e-71
ref|XP_002303678.1| f-box family protein [Populus trichocarpa] g...   250   4e-64
ref|XP_002518880.1| zinc finger protein, putative [Ricinus commu...   245   1e-62
ref|XP_002299441.1| f-box family protein [Populus trichocarpa] g...   231   2e-58
ref|XP_003536179.1| PREDICTED: dof zinc finger protein DOF4.6 [G...   223   4e-56

>ref|XP_002262703.1| PREDICTED: dof zinc finger protein DOF4.6-like [Vitis vinifera]
          Length = 288

 Score =  273 bits (698), Expect = 4e-71
 Identities = 155/314 (49%), Positives = 185/314 (58%), Gaps = 10/314 (3%)
 Frame = +2

Query: 38  MDTAHWPQEIGMKPMEEIVVQNATNXXXXXXXXXXXLERRARPQKEAAINCPRCNSTNTK 217
           MDTA WPQEI +KP+EEIV                 LE+RARPQKE A+NCPRCNSTNTK
Sbjct: 1   MDTAQWPQEIVVKPLEEIVTNTCPKPA---------LEKRARPQKEQALNCPRCNSTNTK 51

Query: 218 FCYYNNYSLSQPRYFCKTCRRYWTEGGSLRNVPVGGG--XXXXXXXXXXXXXXXXXXXXL 391
           FCYYNNYSLSQPRYFCK CRRYWTEGGSLRN+PVGGG                      L
Sbjct: 52  FCYYNNYSLSQPRYFCKACRRYWTEGGSLRNIPVGGGSRKNKRSSSSSSSSSSSASSKKL 111

Query: 392 PDLVVP--PAPTPVNPRMHHEHGQDLNLGFPSTNDFKTISELIQVPNFDGTKN------X 547
           PDLV P     +  NP++H   GQDLNL FP+  DF+++SE +Q+P+ + + N       
Sbjct: 112 PDLVPPGCSQSSAQNPKIH--EGQDLNLSFPAAQDFRSVSEFMQMPSIENSNNNTNNSSK 169

Query: 548 XXXXXXXXXXXXXXXXXXXXGITTRGMMNSFMPIPIPDPNSVYSSSGQLMIPMPEFKIPS 727
                               GIT+RG +NSFMP+PIPDPN+VY++      PM EFK P+
Sbjct: 170 SHITSTSSTSSHLSALELLTGITSRG-LNSFMPMPIPDPNTVYTTG----FPMQEFK-PT 223

Query: 728 LNFSLDXXXXXXXXXXXXSSIHESSSGRLLFPFEDLKXXXXXXXXHDGHHVEQNRDQNGD 907
           LNFSLD              +  SSSGRLLFPFEDLK            H+EQ R+Q GD
Sbjct: 224 LNFSLD---GLGSGYGSIQGVQGSSSGRLLFPFEDLK-----QVSSTADHIEQTREQ-GD 274

Query: 908 TNGFWSGMLGGSSW 949
           + G+W+GMLGG SW
Sbjct: 275 STGYWTGMLGGGSW 288


>ref|XP_002303678.1| f-box family protein [Populus trichocarpa]
           gi|222841110|gb|EEE78657.1| f-box family protein
           [Populus trichocarpa]
          Length = 279

 Score =  250 bits (638), Expect = 4e-64
 Identities = 145/310 (46%), Positives = 182/310 (58%), Gaps = 6/310 (1%)
 Frame = +2

Query: 38  MDTAHWPQEIGMKPMEEIVVQNATNXXXXXXXXXXXLERRARPQKEAAINCPRCNSTNTK 217
           MDTA WPQEI +KP+EEIV                 LER+ARPQKE A+NCPRCNSTNTK
Sbjct: 1   MDTAQWPQEIVVKPIEEIVTNTCPKPPA--------LERKARPQKEQALNCPRCNSTNTK 52

Query: 218 FCYYNNYSLSQPRYFCKTCRRYWTEGGSLRNVPVGGGXXXXXXXXXXXXXXXXXXXXLPD 397
           FCYYNNYSL+QPRYFCKTCRRYWTEGGSLRN+PVGGG                    LPD
Sbjct: 53  FCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNIPVGGG---SRKNKRSSASSSSSSKKLPD 109

Query: 398 LVVPPA---PTPVNPRMHHEHGQDLNLGFPSTNDFKTISELIQVPNFDGTKN---XXXXX 559
           L+ P +    +  NP++H   GQDLNL FPST   ++ SELIQVP+ +   N        
Sbjct: 110 LITPTSLSQTSTQNPKIH--EGQDLNLAFPSTQSIRSFSELIQVPSINENNNKNPISSST 167

Query: 560 XXXXXXXXXXXXXXXXGITTRGMMNSFMPIPIPDPNSVYSSSGQLMIPMPEFKIPSLNFS 739
                           GI++RG +NSF P+P+ DP+++Y+SS     P+ +FK P+LNFS
Sbjct: 168 SASTTTSQLSALELLTGISSRG-LNSF-PMPVQDPSTLYTSS----FPLHDFK-PTLNFS 220

Query: 740 LDXXXXXXXXXXXXSSIHESSSGRLLFPFEDLKXXXXXXXXHDGHHVEQNRDQNGDTNGF 919
           LD                + ++GRLLFPFEDLK             +E N+ ++GD+ G+
Sbjct: 221 LDGLGSCYGSLQGV----QETNGRLLFPFEDLKQVSSTA------DIEHNK-EHGDSTGY 269

Query: 920 WSGMLGGSSW 949
           W+GMLGG SW
Sbjct: 270 WTGMLGGGSW 279


>ref|XP_002518880.1| zinc finger protein, putative [Ricinus communis]
           gi|223541867|gb|EEF43413.1| zinc finger protein,
           putative [Ricinus communis]
          Length = 306

 Score =  245 bits (625), Expect = 1e-62
 Identities = 149/324 (45%), Positives = 177/324 (54%), Gaps = 20/324 (6%)
 Frame = +2

Query: 38  MDTAHWPQEIGMKPMEEIVVQNATNXXXXXXXXXXXLERRARPQKEAAINCPRCNSTNTK 217
           MDTA WPQEI +KP+EE+V    T            LER++RPQKE A+NCPRCNSTNTK
Sbjct: 1   MDTAQWPQEILVKPIEELVTN--TCPKPASAAAAAALERKSRPQKEQALNCPRCNSTNTK 58

Query: 218 FCYYNNYSLSQPRYFCKTCRRYWTEGGSLRNVPVGGGXXXXXXXXXXXXXXXXXXXX--- 388
           FCYYNNYSL+QPRYFCKTCRRYWTEGGSLRN+PVGGG                       
Sbjct: 59  FCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNIPVGGGSRKNKRSSSSSSSSLSTCSSNSS 118

Query: 389 ------LPDLVVPP-------APTPVNPRMHHEHGQDLNLGFPSTNDFKTISELIQVPNF 529
                 LPDLV P           P N       G DLNL FPST   ++ SELIQVP+ 
Sbjct: 119 SSSSKKLPDLVTPQISLSQSSTQNPNNNSNKIPEGHDLNLAFPSTQGIRSFSELIQVPSI 178

Query: 530 DGTKN--XXXXXXXXXXXXXXXXXXXXXGITTRGMMNSFMPIPIPDPNSVYSSSGQLMIP 703
           +   N                       GI++RG +NSFMP+P+ DPNSVY+S      P
Sbjct: 179 NEGNNNKNPSSTSNTTTSSQLSALELLTGISSRG-LNSFMPMPVQDPNSVYTSG----FP 233

Query: 704 MPEFKIPSLNFSLDXXXXXXXXXXXXSSIHESSSGRLLFPFEDLKXXXXXXXXHDGHHVE 883
           + +FK P+LNFSLD                + + GRLLFPFEDLK             +E
Sbjct: 234 LQDFK-PTLNFSLDGLGSGYGSLQGV----QETGGRLLFPFEDLK-----QVSSTSTDIE 283

Query: 884 QNRDQNGDTNGFWSGML--GGSSW 949
           QNR+Q GD+ G+W+GML  GG SW
Sbjct: 284 QNREQ-GDSAGYWTGMLGGGGGSW 306


>ref|XP_002299441.1| f-box family protein [Populus trichocarpa]
           gi|222846699|gb|EEE84246.1| f-box family protein
           [Populus trichocarpa]
          Length = 247

 Score =  231 bits (589), Expect = 2e-58
 Identities = 139/306 (45%), Positives = 174/306 (56%), Gaps = 2/306 (0%)
 Frame = +2

Query: 38  MDTAHWPQEIGMKPMEEIVVQNATNXXXXXXXXXXXLERRARPQKEAAINCPRCNSTNTK 217
           MDTA WPQEI +KP+EEIVV   +            LER+ RPQKE A+NCPRCNSTNTK
Sbjct: 1   MDTAQWPQEIVVKPIEEIVVNTCSKPPA--------LERKVRPQKEQALNCPRCNSTNTK 52

Query: 218 FCYYNNYSLSQPRYFCKTCRRYWTEGGSLRNVPVGGGXXXXXXXXXXXXXXXXXXXXLPD 397
           FCYYNNYSL+QPRYFCKTCRRYWTEGGSLR++PVGGG                    LPD
Sbjct: 53  FCYYNNYSLTQPRYFCKTCRRYWTEGGSLRSIPVGGG---SRKNKRSSASSSSSSKKLPD 109

Query: 398 LVVPPAPTPVNPRMHHEH-GQDLNLGFPSTNDFKTISELIQVPNFDGTKNXXXXXXXXXX 574
           L+ PP  +  +   H  H GQDLNL FPST   +T+  L                     
Sbjct: 110 LISPPTLSQTSTENHKIHEGQDLNLAFPSTQGIRTLELL--------------------- 148

Query: 575 XXXXXXXXXXXGITTRGMMNSFMPIPI-PDPNSVYSSSGQLMIPMPEFKIPSLNFSLDXX 751
                      GI++RG +NSF P+P+  DP+++Y S      P+ +FK P+L+FSLD  
Sbjct: 149 ----------TGISSRG-LNSF-PMPVHQDPSTLYPSG----FPLQDFK-PTLSFSLD-- 189

Query: 752 XXXXXXXXXXSSIHESSSGRLLFPFEDLKXXXXXXXXHDGHHVEQNRDQNGDTNGFWSGM 931
                       +HE ++GRLLFPFEDLK             +EQN+ ++GD+ G+W+GM
Sbjct: 190 -GLGSGYGDLQGVHE-TNGRLLFPFEDLKQQVSSTA-----DIEQNK-EHGDSTGYWTGM 241

Query: 932 LGGSSW 949
           LGG SW
Sbjct: 242 LGGGSW 247


>ref|XP_003536179.1| PREDICTED: dof zinc finger protein DOF4.6 [Glycine max]
          Length = 269

 Score =  223 bits (569), Expect = 4e-56
 Identities = 133/319 (41%), Positives = 165/319 (51%), Gaps = 15/319 (4%)
 Frame = +2

Query: 38  MDTAHWPQEIGMKPMEEIVVQNATNXXXXXXXXXXXLERRARPQKEAAINCPRCNSTNTK 217
           MDTA WPQE+ +KP+E+IVV N T            +ER+ RPQKE AINCPRC+S NTK
Sbjct: 1   MDTAQWPQEMVVKPIEDIVVTNTT----CTKAAVGSVERKPRPQKEQAINCPRCHSINTK 56

Query: 218 FCYYNNYSLSQPRYFCKTCRRYWTEGGSLRNVPVGGG-------XXXXXXXXXXXXXXXX 376
           FCYYNNYSL+QPRYFCKTCRRYWTEGG+LRN+PVGGG                       
Sbjct: 57  FCYYNNYSLTQPRYFCKTCRRYWTEGGTLRNIPVGGGSRKNKRSSASCSNNSHHNDNNST 116

Query: 377 XXXXLPDLVVPP---APTPVNPRMHH----EHGQDLNLGFPSTNDFKTISELIQVPNFDG 535
                 DLV+ P   + T  NP+ +       GQDLNL FPST +   +  L  + +   
Sbjct: 117 NKKLSADLVITPPTLSHTTQNPKSNDNSIIHQGQDLNLAFPSTTNLSALELLTGITSSSS 176

Query: 536 TKNXXXXXXXXXXXXXXXXXXXXXGITTRGMMNSFMPIPIP-DPNSVYSSSGQLMIPMPE 712
           T                            G+  SFMPIP+P +PNS+Y+       P+ +
Sbjct: 177 T----------------------------GLSTSFMPIPVPSNPNSIYTCG----FPLQD 204

Query: 713 FKIPSLNFSLDXXXXXXXXXXXXSSIHESSSGRLLFPFEDLKXXXXXXXXHDGHHVEQNR 892
           FK  +LNFSLD            +S+     GRLLFPFEDLK                N+
Sbjct: 205 FKPGTLNFSLD------GIGKGYTSLQNVHGGRLLFPFEDLKQV--------SSTTTMNQ 250

Query: 893 DQNGDTNGFWSGMLGGSSW 949
            Q GD+ G+W+GMLGG SW
Sbjct: 251 TQQGDSTGYWTGMLGGGSW 269


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