BLASTX nr result

ID: Atractylodes21_contig00003475 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00003475
         (788 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276692.1| PREDICTED: ran-binding protein 1 homolog c-l...   115   3e-26
ref|XP_002308229.1| predicted protein [Populus trichocarpa] gi|1...   110   4e-26
ref|XP_002322995.1| predicted protein [Populus trichocarpa] gi|2...   106   5e-24
gb|ABK92633.1| unknown [Populus trichocarpa]                          106   5e-24
ref|XP_004145252.1| PREDICTED: ran-binding protein 1 homolog b-l...   108   5e-24

>ref|XP_002276692.1| PREDICTED: ran-binding protein 1 homolog c-like [Vitis vinifera]
          Length = 223

 Score =  115 bits (288), Expect(2) = 3e-26
 Identities = 53/63 (84%), Positives = 56/63 (88%)
 Frame = +1

Query: 4   TTSVQEHAGNDKSCVWHAADFSDGELKDELFCIRFGSVENCRKFKQTVQEVAESQQVKEE 183
           T SVQEHAGNDKSCVWHA DF+DGELKDELFCIRF SVENC+ F + VQEVAESQQ KEE
Sbjct: 105 TMSVQEHAGNDKSCVWHATDFADGELKDELFCIRFASVENCKSFMEKVQEVAESQQKKEE 164

Query: 184 NKD 192
           NKD
Sbjct: 165 NKD 167



 Score = 29.3 bits (64), Expect(2) = 3e-26
 Identities = 12/20 (60%), Positives = 18/20 (90%)
 Frame = +2

Query: 254 AGLLEKLSVDDKKAEEQVKE 313
           AGLLEKLSV++K+ E++ +E
Sbjct: 172 AGLLEKLSVEEKETEDKAEE 191


>ref|XP_002308229.1| predicted protein [Populus trichocarpa] gi|118488201|gb|ABK95920.1|
           unknown [Populus trichocarpa]
           gi|222854205|gb|EEE91752.1| predicted protein [Populus
           trichocarpa]
          Length = 232

 Score =  110 bits (274), Expect(2) = 4e-26
 Identities = 50/63 (79%), Positives = 57/63 (90%)
 Frame = +1

Query: 4   TTSVQEHAGNDKSCVWHAADFSDGELKDELFCIRFGSVENCRKFKQTVQEVAESQQVKEE 183
           T +VQEH GNDKSC+WHAADF+DGELKDELFCIRF SVENC+ FK+TV+EVAESQ  KEE
Sbjct: 120 TINVQEHHGNDKSCLWHAADFADGELKDELFCIRFPSVENCKTFKETVEEVAESQGKKEE 179

Query: 184 NKD 192
           +KD
Sbjct: 180 SKD 182



 Score = 34.3 bits (77), Expect(2) = 4e-26
 Identities = 20/44 (45%), Positives = 24/44 (54%)
 Frame = +2

Query: 254 AGLLEKLSVDDKKAEEQVKEASDXXXXXXXXXXXXXDSEKEETP 385
           AGLLEKLSV D K EE+ K+A +             D EKE+ P
Sbjct: 187 AGLLEKLSVGDSKTEEKEKQAKE--LSQTVADKAKEDGEKEDEP 228


>ref|XP_002322995.1| predicted protein [Populus trichocarpa] gi|222867625|gb|EEF04756.1|
           predicted protein [Populus trichocarpa]
          Length = 235

 Score =  106 bits (264), Expect(2) = 5e-24
 Identities = 48/63 (76%), Positives = 56/63 (88%)
 Frame = +1

Query: 4   TTSVQEHAGNDKSCVWHAADFSDGELKDELFCIRFGSVENCRKFKQTVQEVAESQQVKEE 183
           T +VQEH GNDKSC+WHAADF+DGELKDELFCIRF SVENC+ FK+TV+EVAES+  K E
Sbjct: 118 TINVQEHQGNDKSCLWHAADFADGELKDELFCIRFPSVENCKTFKETVEEVAESRGKKVE 177

Query: 184 NKD 192
           +KD
Sbjct: 178 SKD 180



 Score = 31.2 bits (69), Expect(2) = 5e-24
 Identities = 14/20 (70%), Positives = 17/20 (85%)
 Frame = +2

Query: 254 AGLLEKLSVDDKKAEEQVKE 313
           AGL+EKLSV+D K EE+ KE
Sbjct: 185 AGLIEKLSVEDSKKEEKEKE 204


>gb|ABK92633.1| unknown [Populus trichocarpa]
          Length = 235

 Score =  106 bits (264), Expect(2) = 5e-24
 Identities = 48/63 (76%), Positives = 56/63 (88%)
 Frame = +1

Query: 4   TTSVQEHAGNDKSCVWHAADFSDGELKDELFCIRFGSVENCRKFKQTVQEVAESQQVKEE 183
           T +VQEH GNDKSC+WHAADF+DGELKDELFCIRF SVENC+ FK+TV+EVAES+  K E
Sbjct: 118 TINVQEHQGNDKSCLWHAADFADGELKDELFCIRFPSVENCKTFKETVEEVAESRGKKVE 177

Query: 184 NKD 192
           +KD
Sbjct: 178 SKD 180



 Score = 31.2 bits (69), Expect(2) = 5e-24
 Identities = 14/20 (70%), Positives = 17/20 (85%)
 Frame = +2

Query: 254 AGLLEKLSVDDKKAEEQVKE 313
           AGL+EKLSV+D K EE+ KE
Sbjct: 185 AGLIEKLSVEDSKKEEKEKE 204


>ref|XP_004145252.1| PREDICTED: ran-binding protein 1 homolog b-like [Cucumis sativus]
           gi|449471757|ref|XP_004153400.1| PREDICTED: ran-binding
           protein 1 homolog b-like [Cucumis sativus]
          Length = 216

 Score =  108 bits (271), Expect(2) = 5e-24
 Identities = 48/61 (78%), Positives = 54/61 (88%)
 Frame = +1

Query: 10  SVQEHAGNDKSCVWHAADFSDGELKDELFCIRFGSVENCRKFKQTVQEVAESQQVKEENK 189
           +VQEHAGNDKSCVWHA DF+DGELKDELFCIRF S+ENC+ F +T QE+AESQQ K ENK
Sbjct: 106 TVQEHAGNDKSCVWHATDFADGELKDELFCIRFPSIENCKSFMETFQEIAESQQKKGENK 165

Query: 190 D 192
           D
Sbjct: 166 D 166



 Score = 28.5 bits (62), Expect(2) = 5e-24
 Identities = 12/20 (60%), Positives = 17/20 (85%)
 Frame = +2

Query: 254 AGLLEKLSVDDKKAEEQVKE 313
           AGLLE LSV++KK E++ +E
Sbjct: 171 AGLLETLSVEEKKTEDKAEE 190


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