BLASTX nr result

ID: Atractylodes21_contig00003354 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00003354
         (340 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P33444.4|RS3A_CATRO RecName: Full=40S ribosomal protein S3a; ...    92   2e-34
dbj|BAA00860.1| cyc07 [Catharanthus roseus]                            92   2e-34
sp|P49198.2|RS3A_HELAN RecName: Full=40S ribosomal protein S3a g...    90   3e-33
ref|XP_004134125.1| PREDICTED: 40S ribosomal protein S3a-like [C...    89   4e-33
dbj|BAA05057.1| cyc07 [Catharanthus roseus]                            88   4e-33

>sp|P33444.4|RS3A_CATRO RecName: Full=40S ribosomal protein S3a; AltName: Full=CYC07
           protein
          Length = 261

 Score = 92.0 bits (227), Expect(2) = 2e-34
 Identities = 45/47 (95%), Positives = 47/47 (100%)
 Frame = +1

Query: 199 IMINQAQSCDLKELVQKFIPESIGREIEKATSSIYPLQNVFIRKVKI 339
           IM+NQAQSCDLK+LVQKFIPESIGREIEKATSSIYPLQNVFIRKVKI
Sbjct: 171 IMVNQAQSCDLKDLVQKFIPESIGREIEKATSSIYPLQNVFIRKVKI 217



 Score = 78.6 bits (192), Expect(2) = 2e-34
 Identities = 37/39 (94%), Positives = 38/39 (97%)
 Frame = +3

Query: 3   FCIGFTKKRANQVKRTCYAQSSQIRQIRRKMREIMINQA 119
           FCIGFTKKRANQ KRTCYAQSSQIRQIRRKMREIM+NQA
Sbjct: 138 FCIGFTKKRANQQKRTCYAQSSQIRQIRRKMREIMVNQA 176


>dbj|BAA00860.1| cyc07 [Catharanthus roseus]
          Length = 245

 Score = 92.0 bits (227), Expect(2) = 2e-34
 Identities = 45/47 (95%), Positives = 47/47 (100%)
 Frame = +1

Query: 199 IMINQAQSCDLKELVQKFIPESIGREIEKATSSIYPLQNVFIRKVKI 339
           IM+NQAQSCDLK+LVQKFIPESIGREIEKATSSIYPLQNVFIRKVKI
Sbjct: 171 IMVNQAQSCDLKDLVQKFIPESIGREIEKATSSIYPLQNVFIRKVKI 217



 Score = 78.6 bits (192), Expect(2) = 2e-34
 Identities = 37/39 (94%), Positives = 38/39 (97%)
 Frame = +3

Query: 3   FCIGFTKKRANQVKRTCYAQSSQIRQIRRKMREIMINQA 119
           FCIGFTKKRANQ KRTCYAQSSQIRQIRRKMREIM+NQA
Sbjct: 138 FCIGFTKKRANQQKRTCYAQSSQIRQIRRKMREIMVNQA 176


>sp|P49198.2|RS3A_HELAN RecName: Full=40S ribosomal protein S3a gi|469248|gb|AAA80978.1|
           ribosomal protein S3a [Helianthus annuus]
          Length = 260

 Score = 89.7 bits (221), Expect(2) = 3e-33
 Identities = 44/47 (93%), Positives = 46/47 (97%)
 Frame = +1

Query: 199 IMINQAQSCDLKELVQKFIPESIGREIEKATSSIYPLQNVFIRKVKI 339
           IM+ QAQ+CDLKELVQKFIPESIGREIEKATSSIYPLQNVFIRKVKI
Sbjct: 171 IMVTQAQTCDLKELVQKFIPESIGREIEKATSSIYPLQNVFIRKVKI 217



 Score = 77.4 bits (189), Expect(2) = 3e-33
 Identities = 36/39 (92%), Positives = 38/39 (97%)
 Frame = +3

Query: 3   FCIGFTKKRANQVKRTCYAQSSQIRQIRRKMREIMINQA 119
           FCIGFTKKRANQVKRTCYAQSSQI+QIRRKMREIM+ QA
Sbjct: 138 FCIGFTKKRANQVKRTCYAQSSQIKQIRRKMREIMVTQA 176


>ref|XP_004134125.1| PREDICTED: 40S ribosomal protein S3a-like [Cucumis sativus]
           gi|449518719|ref|XP_004166384.1| PREDICTED: 40S
           ribosomal protein S3a-like [Cucumis sativus]
          Length = 261

 Score = 88.6 bits (218), Expect(2) = 4e-33
 Identities = 43/47 (91%), Positives = 46/47 (97%)
 Frame = +1

Query: 199 IMINQAQSCDLKELVQKFIPESIGREIEKATSSIYPLQNVFIRKVKI 339
           IM+NQA SCDLKELV+KFIPESIG+EIEKATSSIYPLQNVFIRKVKI
Sbjct: 171 IMVNQASSCDLKELVRKFIPESIGKEIEKATSSIYPLQNVFIRKVKI 217



 Score = 77.8 bits (190), Expect(2) = 4e-33
 Identities = 36/39 (92%), Positives = 38/39 (97%)
 Frame = +3

Query: 3   FCIGFTKKRANQVKRTCYAQSSQIRQIRRKMREIMINQA 119
           FCIGFTK+R NQVKRTCYAQSSQIRQIRRKMREIM+NQA
Sbjct: 138 FCIGFTKRRPNQVKRTCYAQSSQIRQIRRKMREIMVNQA 176


>dbj|BAA05057.1| cyc07 [Catharanthus roseus]
          Length = 245

 Score = 87.8 bits (216), Expect(2) = 4e-33
 Identities = 43/47 (91%), Positives = 45/47 (95%)
 Frame = +1

Query: 199 IMINQAQSCDLKELVQKFIPESIGREIEKATSSIYPLQNVFIRKVKI 339
           IM+NQA SCDLK+LVQKFIPESIGREIEKAT SIYPLQNVFIRKVKI
Sbjct: 171 IMVNQAPSCDLKDLVQKFIPESIGREIEKATPSIYPLQNVFIRKVKI 217



 Score = 78.6 bits (192), Expect(2) = 4e-33
 Identities = 37/39 (94%), Positives = 38/39 (97%)
 Frame = +3

Query: 3   FCIGFTKKRANQVKRTCYAQSSQIRQIRRKMREIMINQA 119
           FCIGFTKKRANQ KRTCYAQSSQIRQIRRKMREIM+NQA
Sbjct: 138 FCIGFTKKRANQQKRTCYAQSSQIRQIRRKMREIMVNQA 176


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