BLASTX nr result

ID: Atractylodes21_contig00003317 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00003317
         (586 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAM67030.1| gigantea-like [Chrysanthemum seticuspe f. boreale]    142   3e-34
gb|AFK65758.1| GIGANTEA, partial [Chrysanthemum x morifolium]         129   2e-30
ref|XP_002307516.1| predicted protein [Populus trichocarpa] gi|2...   115   8e-26
gb|AEK05861.1| gigantea-5 [Populus balsamifera] gi|339778013|gb|...   115   8e-26
gb|AEK05881.1| gigantea-5 [Populus balsamifera] gi|339778037|gb|...   114   2e-25

>dbj|BAM67030.1| gigantea-like [Chrysanthemum seticuspe f. boreale]
          Length = 1145

 Score =  142 bits (358), Expect(2) = 3e-34
 Identities = 65/80 (81%), Positives = 73/80 (91%)
 Frame = -3

Query: 584  SHPSAHVRALSTSVLRAILHVGLINPSGAPHDTGATCGPAYQYLSIDVINWEADVGKCLT 405
            SHPSAHVR LSTSVLRAILHVGL+NP GAP +  A CGPAYQYL++DV +WE+DVGKCLT
Sbjct: 1057 SHPSAHVRTLSTSVLRAILHVGLVNPIGAPPNIPAACGPAYQYLNVDVTDWESDVGKCLT 1116

Query: 404  WEAHSRLATGMPIQYLDTAA 345
            WEAHSR+ATGMPIQYL+TAA
Sbjct: 1117 WEAHSRIATGMPIQYLNTAA 1136



 Score = 28.5 bits (62), Expect(2) = 3e-34
 Identities = 12/13 (92%), Positives = 13/13 (100%)
 Frame = -2

Query: 291  DTAAKELGCPISI 253
            +TAAKELGCPISI
Sbjct: 1133 NTAAKELGCPISI 1145


>gb|AFK65758.1| GIGANTEA, partial [Chrysanthemum x morifolium]
          Length = 1151

 Score =  129 bits (324), Expect(2) = 2e-30
 Identities = 59/80 (73%), Positives = 69/80 (86%)
 Frame = -3

Query: 584  SHPSAHVRALSTSVLRAILHVGLINPSGAPHDTGATCGPAYQYLSIDVINWEADVGKCLT 405
            SHPSAHVR +S SVLRAILHVG++  SG   +  A CGPAYQYL++DV +WE+DVGKCLT
Sbjct: 1063 SHPSAHVRTVSISVLRAILHVGVLRTSGEEANIPAACGPAYQYLNVDVTDWESDVGKCLT 1122

Query: 404  WEAHSRLATGMPIQYLDTAA 345
            WEAHSR+ATGMPIQYL+TAA
Sbjct: 1123 WEAHSRIATGMPIQYLNTAA 1142



 Score = 28.5 bits (62), Expect(2) = 2e-30
 Identities = 12/13 (92%), Positives = 13/13 (100%)
 Frame = -2

Query: 291  DTAAKELGCPISI 253
            +TAAKELGCPISI
Sbjct: 1139 NTAAKELGCPISI 1151


>ref|XP_002307516.1| predicted protein [Populus trichocarpa] gi|222856965|gb|EEE94512.1|
            predicted protein [Populus trichocarpa]
          Length = 1171

 Score =  115 bits (287), Expect(2) = 8e-26
 Identities = 55/80 (68%), Positives = 61/80 (76%)
 Frame = -3

Query: 584  SHPSAHVRALSTSVLRAILHVGLINPSGAPHDTGATCGPAYQYLSIDVINWEADVGKCLT 405
            SHPSAHVRALSTSVLR I H G I P+          GP+YQYL  DVINW+AD+ KCLT
Sbjct: 1083 SHPSAHVRALSTSVLRDIQHTGSIKPASKLTHRNGIHGPSYQYLRSDVINWQADIEKCLT 1142

Query: 404  WEAHSRLATGMPIQYLDTAA 345
            WEAHSRLATGMP+ +LDTAA
Sbjct: 1143 WEAHSRLATGMPVHHLDTAA 1162



 Score = 27.3 bits (59), Expect(2) = 8e-26
 Identities = 12/13 (92%), Positives = 12/13 (92%)
 Frame = -2

Query: 291  DTAAKELGCPISI 253
            DTAAKELGC ISI
Sbjct: 1159 DTAAKELGCTISI 1171


>gb|AEK05861.1| gigantea-5 [Populus balsamifera] gi|339778013|gb|AEK05866.1|
           gigantea-5 [Populus balsamifera]
           gi|339778019|gb|AEK05871.1| gigantea-5 [Populus
           balsamifera] gi|339778025|gb|AEK05876.1| gigantea-5
           [Populus balsamifera]
          Length = 173

 Score =  115 bits (287), Expect(2) = 8e-26
 Identities = 55/80 (68%), Positives = 61/80 (76%)
 Frame = -3

Query: 584 SHPSAHVRALSTSVLRAILHVGLINPSGAPHDTGATCGPAYQYLSIDVINWEADVGKCLT 405
           SHPSAHVRALSTSVLR I H G I P+          GP+YQYL  DVINW+AD+ KCLT
Sbjct: 85  SHPSAHVRALSTSVLRDIQHTGSIKPASKLTHRNGIHGPSYQYLRSDVINWQADIEKCLT 144

Query: 404 WEAHSRLATGMPIQYLDTAA 345
           WEAHSRLATGMP+ +LDTAA
Sbjct: 145 WEAHSRLATGMPVHHLDTAA 164



 Score = 27.3 bits (59), Expect(2) = 8e-26
 Identities = 12/13 (92%), Positives = 12/13 (92%)
 Frame = -2

Query: 291 DTAAKELGCPISI 253
           DTAAKELGC ISI
Sbjct: 161 DTAAKELGCTISI 173


>gb|AEK05881.1| gigantea-5 [Populus balsamifera] gi|339778037|gb|AEK05886.1|
           gigantea-5 [Populus balsamifera]
           gi|339778043|gb|AEK05891.1| gigantea-5 [Populus
           balsamifera] gi|339778049|gb|AEK05896.1| gigantea-5
           [Populus balsamifera] gi|339778055|gb|AEK05901.1|
           gigantea-5 [Populus balsamifera]
           gi|339778061|gb|AEK05906.1| gigantea-5 [Populus
           balsamifera] gi|339778067|gb|AEK05911.1| gigantea-5
           [Populus balsamifera] gi|339778073|gb|AEK05916.1|
           gigantea-5 [Populus balsamifera]
           gi|339778079|gb|AEK05921.1| gigantea-5 [Populus
           balsamifera]
          Length = 173

 Score =  114 bits (284), Expect(2) = 2e-25
 Identities = 54/80 (67%), Positives = 60/80 (75%)
 Frame = -3

Query: 584 SHPSAHVRALSTSVLRAILHVGLINPSGAPHDTGATCGPAYQYLSIDVINWEADVGKCLT 405
           SHPSAHVRALSTSVLR I H G I P+          GP+YQY   DVINW+AD+ KCLT
Sbjct: 85  SHPSAHVRALSTSVLRDIQHTGSIKPASKLTQRNGIHGPSYQYFRSDVINWQADIEKCLT 144

Query: 404 WEAHSRLATGMPIQYLDTAA 345
           WEAHSRLATGMP+ +LDTAA
Sbjct: 145 WEAHSRLATGMPVHHLDTAA 164



 Score = 27.3 bits (59), Expect(2) = 2e-25
 Identities = 12/13 (92%), Positives = 12/13 (92%)
 Frame = -2

Query: 291 DTAAKELGCPISI 253
           DTAAKELGC ISI
Sbjct: 161 DTAAKELGCTISI 173


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