BLASTX nr result

ID: Atractylodes21_contig00003301 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00003301
         (492 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAD03156.1| resistance protein candidate RGC2B [Lactuca sativa]    178   5e-43
gb|AAP42975.1| RGC2 resistance protein 5A [Lactuca serriola]          178   5e-43
gb|AAP42976.1| RGC2 resistance protein 5A [Lactuca serriola]          178   5e-43
gb|AAD04191.1| resistance protein candidate RGC2C [Lactuca sativa]    174   7e-42
gb|AAQ72573.1| resistance protein RGC2 [Lactuca sativa]               171   6e-41

>gb|AAD03156.1| resistance protein candidate RGC2B [Lactuca sativa]
          Length = 1810

 Score =  178 bits (451), Expect = 5e-43
 Identities = 98/167 (58%), Positives = 119/167 (71%), Gaps = 5/167 (2%)
 Frame = -3

Query: 487  LREVELKMLDCLKYIWKSNPWMVLEFPNLTKVTIFMCKSLEHVFTSSMVGSLLQLQELYI 308
            LRE+ L  LDCL+YIWKSN W   EFPNLT+V I+ CK LEHVFTSSMVGSL QLQEL+I
Sbjct: 1627 LREMNLWGLDCLRYIWKSNQWTAFEFPNLTRVDIYKCKRLEHVFTSSMVGSLSQLQELHI 1686

Query: 307  CDCNKM-EVIVKXXXXXXXXEGD---DAKVNNEIIMLPRLKSLQLQDLQNLKGFYLGKEA 140
             +C++M EVIVK        + +   D + N EI++LPRL SL L++L  LKGF LGKE 
Sbjct: 1687 SNCSEMEEVIVKDADDSVEEDKEKESDGETNKEILVLPRLNSLILRELPCLKGFSLGKED 1746

Query: 139  FSWSSLDTLKIEGCPAIRVFTKGHSETPKLKVIHTNL-ERCAVEEED 2
            FS+  LDTL+IE CPAI  FTKG+S TP+LK I T+    CA  E+D
Sbjct: 1747 FSFPLLDTLRIEECPAITTFTKGNSATPQLKEIETHFGSFCAAGEKD 1793



 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 59/154 (38%), Positives = 82/154 (53%), Gaps = 15/154 (9%)
 Frame = -3

Query: 421  VLEFPNLTKVTIFMCKSLEHVFTSSMVGSLLQLQELYICDCNKMEVIVKXXXXXXXXE-- 248
            V+  PNL  ++I  C  LEH+FT S + SL QLQEL I  C  M+VIVK        +  
Sbjct: 1366 VIMLPNLKILSIGNCGGLEHIFTFSALESLRQLQELKIKFCYGMKVIVKKEEDEYGEQQT 1425

Query: 247  -------------GDDAKVNNEIIMLPRLKSLQLQDLQNLKGFYLGKEAFSWSSLDTLKI 107
                            +  + ++++ P LKS+ L +L  L GF+LG   F   SLD LKI
Sbjct: 1426 TTTTTKGASSSSSSSSSSSSKKVVVFPCLKSIVLVNLPELVGFFLGMNEFRLPSLDKLKI 1485

Query: 106  EGCPAIRVFTKGHSETPKLKVIHTNLERCAVEEE 5
            + CP + VFT G S  P+LK IHT L +  +++E
Sbjct: 1486 KKCPKMMVFTAGGSTAPQLKYIHTRLGKHTLDQE 1519


>gb|AAP42975.1| RGC2 resistance protein 5A [Lactuca serriola]
          Length = 235

 Score =  178 bits (451), Expect = 5e-43
 Identities = 98/167 (58%), Positives = 119/167 (71%), Gaps = 5/167 (2%)
 Frame = -3

Query: 487 LREVELKMLDCLKYIWKSNPWMVLEFPNLTKVTIFMCKSLEHVFTSSMVGSLLQLQELYI 308
           LRE+ L  LDCL+YIWKSN W   EFPNLT+V I+ CK LEHVFTSSMVGSL QLQEL+I
Sbjct: 59  LREMNLWGLDCLRYIWKSNQWTAFEFPNLTRVDIYKCKRLEHVFTSSMVGSLSQLQELHI 118

Query: 307 CDCNKM-EVIVKXXXXXXXXEGD---DAKVNNEIIMLPRLKSLQLQDLQNLKGFYLGKEA 140
            +C++M EVIVK        + +   D + N EI++LPRL SL L++L  LKGF LGKE 
Sbjct: 119 SNCSEMEEVIVKDADDSVEEDKEKESDGETNKEILVLPRLNSLILRELPCLKGFSLGKED 178

Query: 139 FSWSSLDTLKIEGCPAIRVFTKGHSETPKLKVIHTNL-ERCAVEEED 2
           FS+  LDTL+IE CPAI  FTKG+S TP+LK I T+    CA  E+D
Sbjct: 179 FSFPLLDTLRIEECPAITTFTKGNSATPQLKEIETHFGSFCAAGEKD 225


>gb|AAP42976.1| RGC2 resistance protein 5A [Lactuca serriola]
          Length = 235

 Score =  178 bits (451), Expect = 5e-43
 Identities = 98/167 (58%), Positives = 119/167 (71%), Gaps = 5/167 (2%)
 Frame = -3

Query: 487 LREVELKMLDCLKYIWKSNPWMVLEFPNLTKVTIFMCKSLEHVFTSSMVGSLLQLQELYI 308
           LRE+ L  LDCL+YIWKSN W   EFPNLT+V I+ CK LEHVFTSSMVGSL QLQEL+I
Sbjct: 59  LREMNLWGLDCLRYIWKSNQWTAFEFPNLTRVDIYKCKRLEHVFTSSMVGSLSQLQELHI 118

Query: 307 CDCNKM-EVIVKXXXXXXXXEGD---DAKVNNEIIMLPRLKSLQLQDLQNLKGFYLGKEA 140
            +C++M EVIVK        + +   D + N EI++LPRL SL L++L  LKGF LGKE 
Sbjct: 119 SNCSEMEEVIVKDADDSVEEDKEKESDGETNKEILVLPRLNSLILRELPCLKGFSLGKED 178

Query: 139 FSWSSLDTLKIEGCPAIRVFTKGHSETPKLKVIHTNL-ERCAVEEED 2
           FS+  LDTL+IE CPAI  FTKG+S TP+LK I T+    CA  E+D
Sbjct: 179 FSFPLLDTLRIEECPAITTFTKGNSATPQLKEIETHFGSFCAAGEKD 225


>gb|AAD04191.1| resistance protein candidate RGC2C [Lactuca sativa]
          Length = 1804

 Score =  174 bits (441), Expect = 7e-42
 Identities = 93/156 (59%), Positives = 111/156 (71%), Gaps = 4/156 (2%)
 Frame = -3

Query: 487  LREVELKMLDCLKYIWKSNPWMVLEFPNLTKVTIFMCKSLEHVFTSSMVGSLLQLQELYI 308
            L E++L+ LDCL+YIWKSN W   EFPNLT+V I+ C SLEHVFTSSMVGSLLQLQEL I
Sbjct: 1620 LGEMKLRGLDCLRYIWKSNQWTAFEFPNLTRVEIYECNSLEHVFTSSMVGSLLQLQELEI 1679

Query: 307  CDCNKMEVI----VKXXXXXXXXEGDDAKVNNEIIMLPRLKSLQLQDLQNLKGFYLGKEA 140
              CN MEV+              +  D K+N EI++LP LKSL+L  LQ+LKGF LGKE 
Sbjct: 1680 GLCNHMEVVHVQDADVSVEEDKEKESDGKMNKEILVLPHLKSLKLLLLQSLKGFSLGKED 1739

Query: 139  FSWSSLDTLKIEGCPAIRVFTKGHSETPKLKVIHTN 32
            FS+  LDTL+I  CPAI  FTKG+S TP+LK + TN
Sbjct: 1740 FSFPLLDTLEIYECPAITTFTKGNSATPQLKEMETN 1775



 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 59/149 (39%), Positives = 82/149 (55%), Gaps = 10/149 (6%)
 Frame = -3

Query: 421  VLEFPNLTKVTIFMCKSLEHVFTSSMVGSLLQLQELYICDCNKMEVIVKXXXXXXXXE-- 248
            V+  PNL  ++I  C  LEH+FT S + SL QLQEL I  C +M+VIVK        +  
Sbjct: 1364 VIMLPNLKILSIGNCGGLEHIFTFSALESLRQLQELTIKGCYRMKVIVKKEEDEYGEQQT 1423

Query: 247  --------GDDAKVNNEIIMLPRLKSLQLQDLQNLKGFYLGKEAFSWSSLDTLKIEGCPA 92
                       +  + ++++ P LKS+ L +L  L GF+LG   F   SLD L IE CP 
Sbjct: 1424 TTTTTKGASSSSSSSKKVVVFPCLKSIVLVNLPELVGFFLGMNEFRLPSLDKLIIEKCPK 1483

Query: 91   IRVFTKGHSETPKLKVIHTNLERCAVEEE 5
            + VFT G S  P+LK IHT L +  +++E
Sbjct: 1484 MMVFTAGGSTAPQLKYIHTRLGKHTLDQE 1512


>gb|AAQ72573.1| resistance protein RGC2 [Lactuca sativa]
          Length = 658

 Score =  171 bits (433), Expect = 6e-41
 Identities = 95/156 (60%), Positives = 110/156 (70%), Gaps = 4/156 (2%)
 Frame = -3

Query: 487 LREVELKMLDCLKYIWKSNPWMVLEFPNLTKVTIFMCKSLEHVFTSSMVGSLLQLQELYI 308
           LRE++L  LD L+YIWKSN W V +FPNLT+V I+ CK LEHVFTSSMVGSLLQLQEL+I
Sbjct: 482 LREMKLNNLDGLRYIWKSNQWTVFQFPNLTRVHIYDCKRLEHVFTSSMVGSLLQLQELHI 541

Query: 307 CDCNKM-EVIVKXXXXXXXXEGD---DAKVNNEIIMLPRLKSLQLQDLQNLKGFYLGKEA 140
             C  M EVIVK        + +   D K N EI++LPRLKSL L+ L  LKGF LGKE 
Sbjct: 542 SQCKLMEEVIVKDADVSVEEDKEKESDGKTNKEILVLPRLKSLILERLPCLKGFSLGKED 601

Query: 139 FSWSSLDTLKIEGCPAIRVFTKGHSETPKLKVIHTN 32
           FS+  LDTL I  CPAI   TKG+S TP+LK I TN
Sbjct: 602 FSFPLLDTLSISKCPAITTITKGNSATPQLKEIETN 637



 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 57/157 (36%), Positives = 81/157 (51%), Gaps = 16/157 (10%)
 Frame = -3

Query: 427 WMVLEFPNLTKVTIFMCKSLEHVFTSSMVGSLLQLQELYI--CD-----------CNKME 287
           W + ++    ++ I +C +L  V      G + +LQ L +  CD           C +M+
Sbjct: 227 WSLCQYAR--EINISICGALSSVIPCYAAGQMQKLQVLTVKYCDSKVFQKLTVRNCYEMK 284

Query: 286 VIVKXXXXXXXXEGDDAKVN---NEIIMLPRLKSLQLQDLQNLKGFYLGKEAFSWSSLDT 116
           VIVK          +DA  N    E+++ PRLKS+ L DL  L+GF+LGK  F   SLD 
Sbjct: 285 VIVKKEE-------EDALFNLPSKEVVVFPRLKSIVLMDLPELEGFFLGKNEFQLPSLDK 337

Query: 115 LKIEGCPAIRVFTKGHSETPKLKVIHTNLERCAVEEE 5
           L I  CP + VF  G S  P+LK IHT L R A+++E
Sbjct: 338 LIITECPKMMVFAAGGSTAPQLKYIHTELGRHALDQE 374


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