BLASTX nr result
ID: Atractylodes21_contig00003283
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atractylodes21_contig00003283
(1726 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002285611.1| PREDICTED: pentatricopeptide repeat-containi... 746 0.0
emb|CAN61988.1| hypothetical protein VITISV_026694 [Vitis vinifera] 728 0.0
ref|XP_004170776.1| PREDICTED: pentatricopeptide repeat-containi... 722 0.0
ref|NP_172461.1| pentatricopeptide repeat-containing protein [Ar... 702 0.0
ref|XP_002889775.1| pentatricopeptide repeat-containing protein ... 701 0.0
>ref|XP_002285611.1| PREDICTED: pentatricopeptide repeat-containing protein At1g09900-like
isoform 1 [Vitis vinifera]
Length = 610
Score = 746 bits (1926), Expect = 0.0
Identities = 375/534 (70%), Positives = 432/534 (80%), Gaps = 16/534 (2%)
Frame = +3
Query: 171 MESVVSIKQTHEGFCSFHCVHR----KSFRNHGARMRNSVAVG---------TGSPGKLN 311
M+ +V + QTHEG S VHR K+ AR R+++ +G G+ +
Sbjct: 1 MDLIVPVSQTHEGLYSLQHVHRENTTKTCLGTRARFRSNLVLGYKARFLALSDGTSNECK 60
Query: 312 EKNGYMNRKIKRVSTVSKPETFSPNGRAINGEKTLQLN---GIXXXXXXXXXXXXXXXXX 482
+ G N++ +V + +TFS N + EK ++ G
Sbjct: 61 KIGGSRNQRRNQVFAALRADTFSSNDKLPYAEKNQHVHLSGGNYTSNSSSSIEEHESNNH 120
Query: 483 XXXLIRNGELEEGFKYLQNMVYRGDIPDIIPCTSLIRGFCRTGKTIKATRVMEILEESGA 662
L+RNGELE+GFK+L++MVYRGDIPDIIPCTSLIRGFCR GKT KAT VMEILE+SGA
Sbjct: 121 LRRLVRNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGA 180
Query: 663 VPDVITYNVLISGYCRAGEIDKALNVFDKMSVAPDVVTYNTILRSLCDKGKLKEAMVVLD 842
VPDVITYNVLISGYC++GEID AL V D+M+VAPDVVTYNTILR+LCD GKLK+AM VLD
Sbjct: 181 VPDVITYNVLISGYCKSGEIDNALQVLDRMNVAPDVVTYNTILRTLCDSGKLKQAMEVLD 240
Query: 843 RQMQKKCYPDVITYTILIEAVCKMSGVGQAMKLLDEMKTKGCKPDVVTYNVLINGFCKEG 1022
RQ+QK+CYPDVITYTILIEA CK SGVGQAMKLLDEM+ KG KPDVVTYNVLING CKEG
Sbjct: 241 RQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEG 300
Query: 1023 RLDDAIKFLNDMPSTGCQPNVVSHNIILRSLCSMGKWMDAEKFVADMLQKGCSPSVVTFN 1202
RLD+AIKFLN+MPS GCQPNV++HNIILRS+CS G+WMDAEK ++DML+KGCSPSVVTFN
Sbjct: 301 RLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFN 360
Query: 1203 ILINFLSRRGLLGRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLEIMVSR 1382
ILINFL R+GLLGRAID+LEKMP HGCTPNSLSYNPLLHGFCKEKKMDRAIEYL+IMVSR
Sbjct: 361 ILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSR 420
Query: 1383 GCYPDIVTYNTLLTALCKDGKVDFAVEILNHLSFEGCSPVLITYNTVIDGLSKIGKTGQA 1562
GCYPDIVTYNTLLTALCKDGKVD AVEILN LS +GCSPVLITYNTVIDGLSK+GKT +A
Sbjct: 421 GCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERA 480
Query: 1563 IMLIDEMKQKGLQPDIITYSSVVSGLSREGKVEEAIKFLHDLEGLGVRPNVLTY 1724
I L+DEM++KGL+PDIITYSS+VSGLSREGKV+EAIKF HDLEGLG+RPN +TY
Sbjct: 481 IKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITY 534
Score = 192 bits (489), Expect = 2e-46
Identities = 99/306 (32%), Positives = 167/306 (54%), Gaps = 38/306 (12%)
Frame = +3
Query: 492 LIRNGELEEGFKYLQNMVYRGDIPDIIPCTSLIRGFCRTGKTIKATRVMEILEESGAVPD 671
+ + G L+E K+L NM G P++I ++R C TG+ + A +++ + G P
Sbjct: 296 ICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPS 355
Query: 672 VITYNVLISGYCRAGEIDKALNVFDKMSVA------------------------------ 761
V+T+N+LI+ CR G + +A+++ +KM +
Sbjct: 356 VVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLD 415
Query: 762 --------PDVVTYNTILRSLCDKGKLKEAMVVLDRQMQKKCYPDVITYTILIEAVCKMS 917
PD+VTYNT+L +LC GK+ A+ +L++ K C P +ITY +I+ + K+
Sbjct: 416 IMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVG 475
Query: 918 GVGQAMKLLDEMKTKGCKPDVVTYNVLINGFCKEGRLDDAIKFLNDMPSTGCQPNVVSHN 1097
+A+KLLDEM+ KG KPD++TY+ L++G +EG++D+AIKF +D+ G +PN +++N
Sbjct: 476 KTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYN 535
Query: 1098 IILRSLCSMGKWMDAEKFVADMLQKGCSPSVVTFNILINFLSRRGLLGRAIDVLEKMPQH 1277
I+ LC + A F+A M+ K C P+ T+ ILI ++ GL A+D+L ++
Sbjct: 536 SIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNELCSR 595
Query: 1278 GCTPNS 1295
G S
Sbjct: 596 GLVKKS 601
>emb|CAN61988.1| hypothetical protein VITISV_026694 [Vitis vinifera]
Length = 553
Score = 728 bits (1880), Expect = 0.0
Identities = 369/522 (70%), Positives = 420/522 (80%), Gaps = 4/522 (0%)
Frame = +3
Query: 171 MESVVSIKQTHEGFCSFHCVHR----KSFRNHGARMRNSVAVGTGSPGKLNEKNGYMNRK 338
M+ +V + QTHEG S VHR K+ AR R+++ +G G N
Sbjct: 1 MDLIVPVSQTHEGLYSLQHVHRENTTKTCLGTRARFRSNLVLGGG------------NYT 48
Query: 339 IKRVSTVSKPETFSPNGRAINGEKTLQLNGIXXXXXXXXXXXXXXXXXXXXLIRNGELEE 518
S++ + E+ + R L+RNGELE+
Sbjct: 49 SNSSSSIEEHESNNHLRR---------------------------------LVRNGELED 75
Query: 519 GFKYLQNMVYRGDIPDIIPCTSLIRGFCRTGKTIKATRVMEILEESGAVPDVITYNVLIS 698
GFK+L++MVYRGDIPDIIPCTSLIRGFCR GKT KAT VMEILE+SGAVPDVITYNVLIS
Sbjct: 76 GFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPDVITYNVLIS 135
Query: 699 GYCRAGEIDKALNVFDKMSVAPDVVTYNTILRSLCDKGKLKEAMVVLDRQMQKKCYPDVI 878
GYC++GEID AL V D+M+VAPDVVTYNTILR+LCD GKLK+AM VLDRQ+QK+CYPDVI
Sbjct: 136 GYCKSGEIDNALQVLDRMNVAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQKECYPDVI 195
Query: 879 TYTILIEAVCKMSGVGQAMKLLDEMKTKGCKPDVVTYNVLINGFCKEGRLDDAIKFLNDM 1058
TYTILIEA CK SGVGQAMKLLDEM+ KG KPDVVTYNVLING CKEGRLD+AIKFLN+M
Sbjct: 196 TYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNM 255
Query: 1059 PSTGCQPNVVSHNIILRSLCSMGKWMDAEKFVADMLQKGCSPSVVTFNILINFLSRRGLL 1238
PS GCQPNV++HNIILRS+CS G+WMDAEK ++DML+KGCSPSVVTFNILINFL R+GLL
Sbjct: 256 PSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLL 315
Query: 1239 GRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLEIMVSRGCYPDIVTYNTL 1418
GRAID+LEKMP HGCTPNSLSYNPLLHGFCKEKKMDRAIEYL+IMVSRGCYPDIVTYNTL
Sbjct: 316 GRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTL 375
Query: 1419 LTALCKDGKVDFAVEILNHLSFEGCSPVLITYNTVIDGLSKIGKTGQAIMLIDEMKQKGL 1598
LTALCKDGKVD AVEILN LS +GCSPVLITYNTVIDGLSK+GKT +AI L+DEM++KGL
Sbjct: 376 LTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGL 435
Query: 1599 QPDIITYSSVVSGLSREGKVEEAIKFLHDLEGLGVRPNVLTY 1724
+PDIITYSS+VSGLSREGKV+EAIKF HDLEGLG+RPN +TY
Sbjct: 436 KPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITY 477
Score = 192 bits (489), Expect = 2e-46
Identities = 99/306 (32%), Positives = 167/306 (54%), Gaps = 38/306 (12%)
Frame = +3
Query: 492 LIRNGELEEGFKYLQNMVYRGDIPDIIPCTSLIRGFCRTGKTIKATRVMEILEESGAVPD 671
+ + G L+E K+L NM G P++I ++R C TG+ + A +++ + G P
Sbjct: 239 ICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPS 298
Query: 672 VITYNVLISGYCRAGEIDKALNVFDKMSVA------------------------------ 761
V+T+N+LI+ CR G + +A+++ +KM +
Sbjct: 299 VVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLD 358
Query: 762 --------PDVVTYNTILRSLCDKGKLKEAMVVLDRQMQKKCYPDVITYTILIEAVCKMS 917
PD+VTYNT+L +LC GK+ A+ +L++ K C P +ITY +I+ + K+
Sbjct: 359 IMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVG 418
Query: 918 GVGQAMKLLDEMKTKGCKPDVVTYNVLINGFCKEGRLDDAIKFLNDMPSTGCQPNVVSHN 1097
+A+KLLDEM+ KG KPD++TY+ L++G +EG++D+AIKF +D+ G +PN +++N
Sbjct: 419 KTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYN 478
Query: 1098 IILRSLCSMGKWMDAEKFVADMLQKGCSPSVVTFNILINFLSRRGLLGRAIDVLEKMPQH 1277
I+ LC + A F+A M+ K C P+ T+ ILI ++ GL A+D+L ++
Sbjct: 479 SIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNELCSR 538
Query: 1278 GCTPNS 1295
G S
Sbjct: 539 GLVKKS 544
>ref|XP_004170776.1| PREDICTED: pentatricopeptide repeat-containing protein At1g09900-like
[Cucumis sativus]
Length = 665
Score = 722 bits (1864), Expect = 0.0
Identities = 368/534 (68%), Positives = 422/534 (79%), Gaps = 16/534 (2%)
Frame = +3
Query: 171 MESVVSIKQTHEGFCSFHCVHRKSFRNHGARMR---------NSVAVGTGSPGKLNEKNG 323
M+ + K +GFC FH R + +N R+ NS+ + G G+
Sbjct: 1 MDLTLPAKHYTDGFCLFH---RHTAKNRDRRVMAKGRVSSETNSLRLHAGEKGRFFVIPS 57
Query: 324 YMNRKIKRVSTVSKPETFSPNGRAINGEKTLQ--LNGIXXXXXXXXXXXXXXXXXXXX-- 491
Y + + + V V + +TFS NGR +GEK L LNG
Sbjct: 58 YGSEE-QLVRAVPRVDTFSSNGRLSHGEKNLHTHLNGSSSSSSSYSNHSQSSEEVENNNH 116
Query: 492 ---LIRNGELEEGFKYLQNMVYRGDIPDIIPCTSLIRGFCRTGKTIKATRVMEILEESGA 662
L+RNGELEEGFK+L++MV RGDIPDII CTSLIRG C+TGKT KATRVMEILE+SGA
Sbjct: 117 LRRLVRNGELEEGFKFLEDMVCRGDIPDIIACTSLIRGLCKTGKTWKATRVMEILEDSGA 176
Query: 663 VPDVITYNVLISGYCRAGEIDKALNVFDKMSVAPDVVTYNTILRSLCDKGKLKEAMVVLD 842
VPDVITYNVLISGYC+ GEI AL + D+MSV+PDVVTYNTILR+LCD GKLKEAM VLD
Sbjct: 177 VPDVITYNVLISGYCKTGEIGSALQLLDRMSVSPDVVTYNTILRTLCDSGKLKEAMEVLD 236
Query: 843 RQMQKKCYPDVITYTILIEAVCKMSGVGQAMKLLDEMKTKGCKPDVVTYNVLINGFCKEG 1022
RQMQ++CYPDVITYTILIEA CK SGVGQAMKLLDEM+ KGCKPDVVTYNVLING CKEG
Sbjct: 237 RQMQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEG 296
Query: 1023 RLDDAIKFLNDMPSTGCQPNVVSHNIILRSLCSMGKWMDAEKFVADMLQKGCSPSVVTFN 1202
RLD+AI+FLN MPS GCQPNV++HNIILRS+CS G+WMDAEKF+A+M++KGCSPSVVTFN
Sbjct: 297 RLDEAIRFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKFLAEMIRKGCSPSVVTFN 356
Query: 1203 ILINFLSRRGLLGRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLEIMVSR 1382
ILINFL R+GL+GRAIDVLEKMPQHGCTPNSLSYNPLLH CK+KKM+RAIEYL+IMVSR
Sbjct: 357 ILINFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHALCKDKKMERAIEYLDIMVSR 416
Query: 1383 GCYPDIVTYNTLLTALCKDGKVDFAVEILNHLSFEGCSPVLITYNTVIDGLSKIGKTGQA 1562
GCYPDIVTYNTLLTALCKDGKVD AVEILN L +GCSPVLITYNTVIDGLSK+GKT A
Sbjct: 417 GCYPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDGLSKVGKTDDA 476
Query: 1563 IMLIDEMKQKGLQPDIITYSSVVSGLSREGKVEEAIKFLHDLEGLGVRPNVLTY 1724
I L+DEMK KGL+PDIITYS++V GLSREGKV+EAI F HDLE +GV+PN +TY
Sbjct: 477 IKLLDEMKGKGLKPDIITYSTLVGGLSREGKVDEAIAFFHDLEEMGVKPNAITY 530
Score = 187 bits (474), Expect = 1e-44
Identities = 98/306 (32%), Positives = 164/306 (53%), Gaps = 38/306 (12%)
Frame = +3
Query: 492 LIRNGELEEGFKYLQNMVYRGDIPDIIPCTSLIRGFCRTGKTIKATRVMEILEESGAVPD 671
+ + G L+E ++L +M G P++I ++R C TG+ + A + + + G P
Sbjct: 292 ICKEGRLDEAIRFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKFLAEMIRKGCSPS 351
Query: 672 VITYNVLISGYCRAGEIDKALNVFDKM--------------------------------- 752
V+T+N+LI+ CR G I +A++V +KM
Sbjct: 352 VVTFNILINFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHALCKDKKMERAIEYLD 411
Query: 753 -----SVAPDVVTYNTILRSLCDKGKLKEAMVVLDRQMQKKCYPDVITYTILIEAVCKMS 917
PD+VTYNT+L +LC GK+ A+ +L++ K C P +ITY +I+ + K+
Sbjct: 412 IMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDGLSKVG 471
Query: 918 GVGQAMKLLDEMKTKGCKPDVVTYNVLINGFCKEGRLDDAIKFLNDMPSTGCQPNVVSHN 1097
A+KLLDEMK KG KPD++TY+ L+ G +EG++D+AI F +D+ G +PN +++N
Sbjct: 472 KTDDAIKLLDEMKGKGLKPDIITYSTLVGGLSREGKVDEAIAFFHDLEEMGVKPNAITYN 531
Query: 1098 IILRSLCSMGKWMDAEKFVADMLQKGCSPSVVTFNILINFLSRRGLLGRAIDVLEKMPQH 1277
I+ LC + + A F+A M+ +GC P+ ++ ILI L+ GL A+++L ++
Sbjct: 532 SIMLGLCKARQTVRAIDFLAYMVARGCKPTETSYMILIEGLAYEGLAKEALELLNELCSR 591
Query: 1278 GCTPNS 1295
G S
Sbjct: 592 GVVKKS 597
Score = 124 bits (312), Expect = 6e-26
Identities = 64/209 (30%), Positives = 111/209 (53%), Gaps = 3/209 (1%)
Frame = +3
Query: 492 LIRNGELEEGFKYLQNMVYRGDIPDIIPCTSLIRGFCRTGKTIKATRVMEILEESGAVPD 671
L ++ ++E +YL MV RG PDI+ +L+ C+ GK A ++ L G P
Sbjct: 397 LCKDKKMERAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPV 456
Query: 672 VITYNVLISGYCRAGEIDKALNVFDKMS---VAPDVVTYNTILRSLCDKGKLKEAMVVLD 842
+ITYN +I G + G+ D A+ + D+M + PD++TY+T++ L +GK+ EA+
Sbjct: 457 LITYNTVIDGLSKVGKTDDAIKLLDEMKGKGLKPDIITYSTLVGGLSREGKVDEAIAFFH 516
Query: 843 RQMQKKCYPDVITYTILIEAVCKMSGVGQAMKLLDEMKTKGCKPDVVTYNVLINGFCKEG 1022
+ P+ ITY ++ +CK +A+ L M +GCKP +Y +LI G EG
Sbjct: 517 DLEEMGVKPNAITYNSIMLGLCKARQTVRAIDFLAYMVARGCKPTETSYMILIEGLAYEG 576
Query: 1023 RLDDAIKFLNDMPSTGCQPNVVSHNIILR 1109
+A++ LN++ S G + ++++
Sbjct: 577 LAKEALELLNELCSRGVVKKSSAEQVVVK 605
>ref|NP_172461.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122215618|sp|Q3EDF8.1|PPR28_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At1g09900 gi|332190391|gb|AEE28512.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 598
Score = 702 bits (1812), Expect = 0.0
Identities = 355/528 (67%), Positives = 413/528 (78%), Gaps = 10/528 (1%)
Frame = +3
Query: 171 MESVVSIKQTHEGFCSFHCVHRKSFRNHGARMRNSVAVGTGSPGKLNEKNGYMNRKIKR- 347
M+ +VS EGFC HR+ R N + V + G ++ K +RK R
Sbjct: 1 MDLMVSTSSAQEGFCLIQQFHREYKRG------NKLDVSCRTSGSISSKIPLGSRKRNRL 54
Query: 348 --VSTVSKPETFSPNGRA------INGEKTLQLNG-IXXXXXXXXXXXXXXXXXXXXLIR 500
VS SK E+ NGRA +G NG ++R
Sbjct: 55 VLVSAASKVESSGLNGRAQKFETLSSGYSNSNGNGHYSSVNSSFALEDVESNNHLRQMVR 114
Query: 501 NGELEEGFKYLQNMVYRGDIPDIIPCTSLIRGFCRTGKTIKATRVMEILEESGAVPDVIT 680
GELEEGFK+L+NMVY G++PDIIPCT+LIRGFCR GKT KA +++EILE SGAVPDVIT
Sbjct: 115 TGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVIT 174
Query: 681 YNVLISGYCRAGEIDKALNVFDKMSVAPDVVTYNTILRSLCDKGKLKEAMVVLDRQMQKK 860
YNV+ISGYC+AGEI+ AL+V D+MSV+PDVVTYNTILRSLCD GKLK+AM VLDR +Q+
Sbjct: 175 YNVMISGYCKAGEINNALSVLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRD 234
Query: 861 CYPDVITYTILIEAVCKMSGVGQAMKLLDEMKTKGCKPDVVTYNVLINGFCKEGRLDDAI 1040
CYPDVITYTILIEA C+ SGVG AMKLLDEM+ +GC PDVVTYNVL+NG CKEGRLD+AI
Sbjct: 235 CYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAI 294
Query: 1041 KFLNDMPSTGCQPNVVSHNIILRSLCSMGKWMDAEKFVADMLQKGCSPSVVTFNILINFL 1220
KFLNDMPS+GCQPNV++HNIILRS+CS G+WMDAEK +ADML+KG SPSVVTFNILINFL
Sbjct: 295 KFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFL 354
Query: 1221 SRRGLLGRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLEIMVSRGCYPDI 1400
R+GLLGRAID+LEKMPQHGC PNSLSYNPLLHGFCKEKKMDRAIEYLE MVSRGCYPDI
Sbjct: 355 CRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDI 414
Query: 1401 VTYNTLLTALCKDGKVDFAVEILNHLSFEGCSPVLITYNTVIDGLSKIGKTGQAIMLIDE 1580
VTYNT+LTALCKDGKV+ AVEILN LS +GCSPVLITYNTVIDGL+K GKTG+AI L+DE
Sbjct: 415 VTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDE 474
Query: 1581 MKQKGLQPDIITYSSVVSGLSREGKVEEAIKFLHDLEGLGVRPNVLTY 1724
M+ K L+PD ITYSS+V GLSREGKV+EAIKF H+ E +G+RPN +T+
Sbjct: 475 MRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTF 522
Score = 186 bits (471), Expect = 2e-44
Identities = 91/267 (34%), Positives = 157/267 (58%), Gaps = 3/267 (1%)
Frame = +3
Query: 504 GELEEGFKYLQNMVYRGDIPDIIPCTSLIRGFCRTGKTIKATRVMEILEESGAVPDVITY 683
G + K L +M+ +G P ++ LI CR G +A ++E + + G P+ ++Y
Sbjct: 323 GRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSY 382
Query: 684 NVLISGYCRAGEIDKALNVFDKM---SVAPDVVTYNTILRSLCDKGKLKEAMVVLDRQMQ 854
N L+ G+C+ ++D+A+ ++M PD+VTYNT+L +LC GK+++A+ +L++
Sbjct: 383 NPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSS 442
Query: 855 KKCYPDVITYTILIEAVCKMSGVGQAMKLLDEMKTKGCKPDVVTYNVLINGFCKEGRLDD 1034
K C P +ITY +I+ + K G+A+KLLDEM+ K KPD +TY+ L+ G +EG++D+
Sbjct: 443 KGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDE 502
Query: 1035 AIKFLNDMPSTGCQPNVVSHNIILRSLCSMGKWMDAEKFVADMLQKGCSPSVVTFNILIN 1214
AIKF ++ G +PN V+ N I+ LC + A F+ M+ +GC P+ ++ ILI
Sbjct: 503 AIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIE 562
Query: 1215 FLSRRGLLGRAIDVLEKMPQHGCTPNS 1295
L+ G+ A+++L ++ G S
Sbjct: 563 GLAYEGMAKEALELLNELCNKGLMKKS 589
Score = 58.5 bits (140), Expect = 5e-06
Identities = 34/125 (27%), Positives = 61/125 (48%), Gaps = 3/125 (2%)
Frame = +3
Query: 492 LIRNGELEEGFKYLQNMVYRGDIPDIIPCTSLIRGFCRTGKTIKATRVMEILEESGAVPD 671
L + G+ + K L M + PD I +SL+ G R GK +A + E G P+
Sbjct: 459 LAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPN 518
Query: 672 VITYNVLISGYCRAGEIDKALNVFDKM---SVAPDVVTYNTILRSLCDKGKLKEAMVVLD 842
+T+N ++ G C++ + D+A++ M P+ +Y ++ L +G KEA+ +L+
Sbjct: 519 AVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLN 578
Query: 843 RQMQK 857
K
Sbjct: 579 ELCNK 583
>ref|XP_002889775.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata] gi|297335617|gb|EFH66034.1|
pentatricopeptide repeat-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 598
Score = 701 bits (1809), Expect = 0.0
Identities = 354/528 (67%), Positives = 413/528 (78%), Gaps = 10/528 (1%)
Frame = +3
Query: 171 MESVVSIKQTHEGFCSFHCVHRKSFRNHGARMRNSVAVGTGSPGKLNEKNGYMNRKIKR- 347
M+ +VS EGFC HR+ R N + V + ++ K +RK R
Sbjct: 1 MDLMVSTSSAQEGFCLIQQFHRECKRG------NKLDVSGRTTRSISSKVPLWSRKRNRL 54
Query: 348 --VSTVSKPETFSPNGRA------INGEKTLQLNG-IXXXXXXXXXXXXXXXXXXXXLIR 500
VS S+ E+ NGRA +G NG L+R
Sbjct: 55 VLVSAASQVESSGLNGRAQKFDTLASGHSNSNGNGHFSSANSSFVLEDVESNNHLRQLVR 114
Query: 501 NGELEEGFKYLQNMVYRGDIPDIIPCTSLIRGFCRTGKTIKATRVMEILEESGAVPDVIT 680
GELEEGFK+L+NMVY G++PDIIPCT+LIRGFCR GKT KA +++E+LE SGAVPDVIT
Sbjct: 115 TGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRMGKTRKAAKILEVLEGSGAVPDVIT 174
Query: 681 YNVLISGYCRAGEIDKALNVFDKMSVAPDVVTYNTILRSLCDKGKLKEAMVVLDRQMQKK 860
YNV+ISGYC+AGEI+ AL+V D+MSV+PDVVTYNTILRSLCD GKLK+AM VLDR +Q+
Sbjct: 175 YNVMISGYCKAGEINNALSVLDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRD 234
Query: 861 CYPDVITYTILIEAVCKMSGVGQAMKLLDEMKTKGCKPDVVTYNVLINGFCKEGRLDDAI 1040
CYPDVITYTILIEA C+ SGVGQAMKLLDEM+ +GC PDVVTYNVL+NG CKEGRLD+AI
Sbjct: 235 CYPDVITYTILIEATCRDSGVGQAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAI 294
Query: 1041 KFLNDMPSTGCQPNVVSHNIILRSLCSMGKWMDAEKFVADMLQKGCSPSVVTFNILINFL 1220
KFLNDMPS+GCQPNV++HNIILRS+CS G+WMDAEK +ADML+KG SPSVVTFNILINFL
Sbjct: 295 KFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFL 354
Query: 1221 SRRGLLGRAIDVLEKMPQHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLEIMVSRGCYPDI 1400
R+GLLGRAID+LEKMP+HGC PNSLSYNPLLHGFCKEKKMDRAIEYLE MVSRGCYPDI
Sbjct: 355 CRKGLLGRAIDILEKMPKHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDI 414
Query: 1401 VTYNTLLTALCKDGKVDFAVEILNHLSFEGCSPVLITYNTVIDGLSKIGKTGQAIMLIDE 1580
VTYNT+LTALCKDGKV+ AVEILN LS +GCSPVLITYNTVIDGL+K GKTG+AI L+DE
Sbjct: 415 VTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDE 474
Query: 1581 MKQKGLQPDIITYSSVVSGLSREGKVEEAIKFLHDLEGLGVRPNVLTY 1724
M+ K L+PD ITYSS+V GLSREGKV+EAIKF H+ E +GVRPN +T+
Sbjct: 475 MRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGVRPNAVTF 522
Score = 185 bits (470), Expect = 3e-44
Identities = 91/267 (34%), Positives = 157/267 (58%), Gaps = 3/267 (1%)
Frame = +3
Query: 504 GELEEGFKYLQNMVYRGDIPDIIPCTSLIRGFCRTGKTIKATRVMEILEESGAVPDVITY 683
G + K L +M+ +G P ++ LI CR G +A ++E + + G P+ ++Y
Sbjct: 323 GRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCQPNSLSY 382
Query: 684 NVLISGYCRAGEIDKALNVFDKM---SVAPDVVTYNTILRSLCDKGKLKEAMVVLDRQMQ 854
N L+ G+C+ ++D+A+ ++M PD+VTYNT+L +LC GK+++A+ +L++
Sbjct: 383 NPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSS 442
Query: 855 KKCYPDVITYTILIEAVCKMSGVGQAMKLLDEMKTKGCKPDVVTYNVLINGFCKEGRLDD 1034
K C P +ITY +I+ + K G+A+KLLDEM+ K KPD +TY+ L+ G +EG++D+
Sbjct: 443 KGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDE 502
Query: 1035 AIKFLNDMPSTGCQPNVVSHNIILRSLCSMGKWMDAEKFVADMLQKGCSPSVVTFNILIN 1214
AIKF ++ G +PN V+ N I+ LC + A F+ M+ +GC P+ ++ ILI
Sbjct: 503 AIKFFHEFERMGVRPNAVTFNSIMLGLCKTRQTDRAIDFLVYMINRGCKPTETSYTILIE 562
Query: 1215 FLSRRGLLGRAIDVLEKMPQHGCTPNS 1295
L+ G+ A+++L ++ G S
Sbjct: 563 GLAYEGMAKEALELLNELCNKGLMKRS 589
Score = 58.2 bits (139), Expect = 7e-06
Identities = 34/125 (27%), Positives = 59/125 (47%), Gaps = 3/125 (2%)
Frame = +3
Query: 492 LIRNGELEEGFKYLQNMVYRGDIPDIIPCTSLIRGFCRTGKTIKATRVMEILEESGAVPD 671
L + G+ + K L M + PD I +SL+ G R GK +A + E G P+
Sbjct: 459 LAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGVRPN 518
Query: 672 VITYNVLISGYCRAGEIDKALNVFDKM---SVAPDVVTYNTILRSLCDKGKLKEAMVVLD 842
+T+N ++ G C+ + D+A++ M P +Y ++ L +G KEA+ +L+
Sbjct: 519 AVTFNSIMLGLCKTRQTDRAIDFLVYMINRGCKPTETSYTILIEGLAYEGMAKEALELLN 578
Query: 843 RQMQK 857
K
Sbjct: 579 ELCNK 583