BLASTX nr result

ID: Atractylodes21_contig00003265 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00003265
         (375 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633172.1| PREDICTED: 26S proteasome non-ATPase regulat...   154   6e-36
ref|XP_003633171.1| PREDICTED: 26S proteasome non-ATPase regulat...   153   1e-35
ref|XP_002278908.1| PREDICTED: 26S proteasome non-ATPase regulat...   153   1e-35
gb|ACJ84421.1| unknown [Medicago truncatula] gi|388517173|gb|AFK...   147   1e-33
ref|XP_003527176.1| PREDICTED: probable 26S proteasome regulator...   144   8e-33

>ref|XP_003633172.1| PREDICTED: 26S proteasome non-ATPase regulatory subunit 9-like
           isoform 3 [Vitis vinifera]
          Length = 210

 Score =  154 bits (390), Expect = 6e-36
 Identities = 80/115 (69%), Positives = 96/115 (83%), Gaps = 5/115 (4%)
 Frame = +3

Query: 6   SNMH-DISSFN--GGGSMSEMDVD--VSRPFAMVDEITEESPAAEDGLQLGDQIVKFGNV 170
           S++H D++S N     +++ MDVD  VS PFA+VDEI E SPAAEDGLQLGD+IVKFGNV
Sbjct: 96  SSLHKDLASHNVLPRDTLTAMDVDATVSLPFAVVDEIAEASPAAEDGLQLGDRIVKFGNV 155

Query: 171 EYGDNLLPRLASEAQMNQGHPVPMVVMRQGASINLAVTPRTWQGRGLLGCNFRIL 335
           E GDNLLPRLASEAQ N GH +P++VMRQGA INL +TPRTWQGRGLLGC+F++L
Sbjct: 156 EAGDNLLPRLASEAQTNHGHAIPVIVMRQGALINLTMTPRTWQGRGLLGCHFQML 210


>ref|XP_003633171.1| PREDICTED: 26S proteasome non-ATPase regulatory subunit 9-like
           isoform 2 [Vitis vinifera] gi|297743643|emb|CBI36526.3|
           unnamed protein product [Vitis vinifera]
          Length = 230

 Score =  153 bits (387), Expect = 1e-35
 Identities = 75/99 (75%), Positives = 87/99 (87%), Gaps = 2/99 (2%)
 Frame = +3

Query: 45  SMSEMDVD--VSRPFAMVDEITEESPAAEDGLQLGDQIVKFGNVEYGDNLLPRLASEAQM 218
           +++ MDVD  VS PFA+VDEI E SPAAEDGLQLGD+IVKFGNVE GDNLLPRLASEAQ 
Sbjct: 132 TLTAMDVDATVSLPFAVVDEIAEASPAAEDGLQLGDRIVKFGNVEAGDNLLPRLASEAQT 191

Query: 219 NQGHPVPMVVMRQGASINLAVTPRTWQGRGLLGCNFRIL 335
           N GH +P++VMRQGA INL +TPRTWQGRGLLGC+F++L
Sbjct: 192 NHGHAIPVIVMRQGALINLTMTPRTWQGRGLLGCHFQML 230


>ref|XP_002278908.1| PREDICTED: 26S proteasome non-ATPase regulatory subunit 9-like
           isoform 1 [Vitis vinifera]
          Length = 216

 Score =  153 bits (387), Expect = 1e-35
 Identities = 75/99 (75%), Positives = 87/99 (87%), Gaps = 2/99 (2%)
 Frame = +3

Query: 45  SMSEMDVD--VSRPFAMVDEITEESPAAEDGLQLGDQIVKFGNVEYGDNLLPRLASEAQM 218
           +++ MDVD  VS PFA+VDEI E SPAAEDGLQLGD+IVKFGNVE GDNLLPRLASEAQ 
Sbjct: 118 TLTAMDVDATVSLPFAVVDEIAEASPAAEDGLQLGDRIVKFGNVEAGDNLLPRLASEAQT 177

Query: 219 NQGHPVPMVVMRQGASINLAVTPRTWQGRGLLGCNFRIL 335
           N GH +P++VMRQGA INL +TPRTWQGRGLLGC+F++L
Sbjct: 178 NHGHAIPVIVMRQGALINLTMTPRTWQGRGLLGCHFQML 216


>gb|ACJ84421.1| unknown [Medicago truncatula] gi|388517173|gb|AFK46648.1| unknown
           [Medicago truncatula]
          Length = 213

 Score =  147 bits (370), Expect = 1e-33
 Identities = 74/99 (74%), Positives = 84/99 (84%), Gaps = 2/99 (2%)
 Frame = +3

Query: 45  SMSEMDVDV--SRPFAMVDEITEESPAAEDGLQLGDQIVKFGNVEYGDNLLPRLASEAQM 218
           S + MDVDV  SRPFA+VDEI++ SPA EDGLQLGDQI+KFGNVE G+NLL RLASEAQ 
Sbjct: 115 SPNSMDVDVLVSRPFAVVDEISDASPAVEDGLQLGDQILKFGNVEAGENLLHRLASEAQS 174

Query: 219 NQGHPVPMVVMRQGASINLAVTPRTWQGRGLLGCNFRIL 335
           + G  VP+V+MRQG  INL VTPRTWQGRGLLGC+FRIL
Sbjct: 175 SMGQTVPVVIMRQGTVINLTVTPRTWQGRGLLGCHFRIL 213


>ref|XP_003527176.1| PREDICTED: probable 26S proteasome regulatory subunit p27-like
           isoform 3 [Glycine max]
          Length = 212

 Score =  144 bits (363), Expect = 8e-33
 Identities = 73/99 (73%), Positives = 82/99 (82%), Gaps = 2/99 (2%)
 Frame = +3

Query: 45  SMSEMDVDV--SRPFAMVDEITEESPAAEDGLQLGDQIVKFGNVEYGDNLLPRLASEAQM 218
           S + MDV+V  SRPFAMVDEI + SPA EDGLQLGDQI+KFGNVE GDNLL RL+SEAQ 
Sbjct: 114 SPNSMDVNVLISRPFAMVDEIADASPAVEDGLQLGDQILKFGNVEAGDNLLQRLSSEAQS 173

Query: 219 NQGHPVPMVVMRQGASINLAVTPRTWQGRGLLGCNFRIL 335
           N G  VP+V+MRQG  INL +TPR WQGRGLLGC+FRIL
Sbjct: 174 NLGCAVPVVIMRQGTVINLTITPRPWQGRGLLGCHFRIL 212


Top