BLASTX nr result

ID: Atractylodes21_contig00003186 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00003186
         (1365 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q00265.1|PCNA2_DAUCA RecName: Full=Proliferating cell nuclear...   508   e-141
emb|CAB56779.1| proliferating cell-nuclear antigen [Daucus carota]    503   e-140
gb|ADA70357.1| proliferation cell nuclear antigen [Persea americ...   489   e-136
gb|AAG24908.1|AF305075_1 proliferating cell nuclear antigen [Nic...   474   e-131
sp|Q00268.1|PCNA1_DAUCA RecName: Full=Proliferating cell nuclear...   473   e-131

>sp|Q00265.1|PCNA2_DAUCA RecName: Full=Proliferating cell nuclear antigen large form;
            Short=PCNA; AltName: Full=Cyclin
          Length = 365

 Score =  508 bits (1307), Expect = e-141
 Identities = 269/381 (70%), Positives = 308/381 (80%), Gaps = 9/381 (2%)
 Frame = -2

Query: 1292 MLELRLVQGSLLKKVMESIKDLVNDANFDCSASGFSLQAMDSSHVALVSLLLRSEGFEHY 1113
            MLELRLVQG LLKKV+ESIKDLVNDANFDCSASGFSLQAMDSSHVALV++LLRSEGFEHY
Sbjct: 1    MLELRLVQGGLLKKVLESIKDLVNDANFDCSASGFSLQAMDSSHVALVAVLLRSEGFEHY 60

Query: 1112 RCDRNLSMGMNLGNMAKMLRCAGNDDIVTIKADDGGDCVTFMFESPNQDKIADFEMKLMD 933
            RCDRN+SMGMNLGNMAKMLRCAGNDDIVT+KADD GD +TFMFESP QDKI+DFEMKLMD
Sbjct: 61   RCDRNISMGMNLGNMAKMLRCAGNDDIVTMKADDDGDVITFMFESPTQDKISDFEMKLMD 120

Query: 932  IDSEHLGIPEAEYEAIVRMPSSEFARICKDLSTIGDTVVISVTKEGIKFSTKGDIGTANI 753
            IDSEHLGIPE+EYEAIVRMPS+EFARICKDLSTIGDTVVISVTKEG+KFST+GDIGTANI
Sbjct: 121  IDSEHLGIPESEYEAIVRMPSAEFARICKDLSTIGDTVVISVTKEGVKFSTRGDIGTANI 180

Query: 752  VCRQNTSVDKPEEATIIEMETPVSLTFALRYMNSFTKATPLASQVTVSLSSELPIVVEYK 573
            VCRQNTSVDKPE+ATIIEM+  VSLTFALRYMNSFTKATPLA+QVT+SLSSELP+VVEYK
Sbjct: 181  VCRQNTSVDKPEDATIIEMQETVSLTFALRYMNSFTKATPLANQVTISLSSELPVVVEYK 240

Query: 572  IAEMGYLRFYLAPKIEEDEEMGGYQAEPVETK---KTSEKKPKAEPKSNE-EPKRRVVKI 405
            IAEMGY+R+YLAPKIEE++E   Y A+P +      TS    K    +N+ + K+R +K 
Sbjct: 241  IAEMGYIRYYLAPKIEEEDEAANY-AQPAQNSAAAATSNNGTKKNEGNNKVDSKKRAIKS 299

Query: 404  DLDEEEE-----ETKPKIVTNPRSESDGYVEVVGCKPGTGIIKPKEETNGEGEVMDVKPS 240
            +  ++ E     + + K  T   +  D  VEV+         KPK E +   EVM+ KP 
Sbjct: 300  EFVDDSEAATDAQPQAKAKTKTEAGEDDDVEVMD-------TKPKNEPDDGDEVMETKP- 351

Query: 239  IEAAAKAEIETNGEPEVMDVE 177
                   + E+NGE EVMD+E
Sbjct: 352  -------KTESNGEVEVMDIE 365


>emb|CAB56779.1| proliferating cell-nuclear antigen [Daucus carota]
          Length = 367

 Score =  503 bits (1294), Expect = e-140
 Identities = 269/383 (70%), Positives = 308/383 (80%), Gaps = 11/383 (2%)
 Frame = -2

Query: 1292 MLELRLVQGSLLKKVMESIKDLVNDANFDCSASGFSLQAMDSSHVALVSLLLRSEGFEHY 1113
            MLELRLVQG LLKKV+ESIKDLVNDANFDCSASGFSLQAMDSSHVALV++LLRSEGFEHY
Sbjct: 1    MLELRLVQGGLLKKVLESIKDLVNDANFDCSASGFSLQAMDSSHVALVAVLLRSEGFEHY 60

Query: 1112 RCDRNLSMGMNLGNMAKMLRCAGNDDIVTIKADDGGDCVTFMFESPNQDKIADFEMKLMD 933
            RCDRN+SMGMNLGNMAKMLRCAGNDDIVT+KADD GD +TFMFESP QDKI+DFEMKLMD
Sbjct: 61   RCDRNISMGMNLGNMAKMLRCAGNDDIVTMKADDDGDVITFMFESPTQDKISDFEMKLMD 120

Query: 932  IDSEHLGIPEA--EYEAIVRMPSSEFARICKDLSTIGDTVVISVTKEGIKFSTKGDIGTA 759
            IDSEHLGIPE+  EYEAIVRMPS+EFARICKDLSTIGDTVVISVTKEG+KFST+GDIGTA
Sbjct: 121  IDSEHLGIPESEYEYEAIVRMPSAEFARICKDLSTIGDTVVISVTKEGVKFSTRGDIGTA 180

Query: 758  NIVCRQNTSVDKPEEATIIEMETPVSLTFALRYMNSFTKATPLASQVTVSLSSELPIVVE 579
            NIVCRQNTSVDKPE+ATIIEM+  VSLTFALRYMNSFTKATPLA+QVT+SLSSELP+VVE
Sbjct: 181  NIVCRQNTSVDKPEDATIIEMQETVSLTFALRYMNSFTKATPLANQVTISLSSELPVVVE 240

Query: 578  YKIAEMGYLRFYLAPKIEEDEEMGGYQAEPVETK---KTSEKKPKAEPKSNE-EPKRRVV 411
            YKIAEMGY+R+YLAPKIEE++E   Y A+P +      TS    K    +N+ + K+R +
Sbjct: 241  YKIAEMGYIRYYLAPKIEEEDEAANY-AQPAQNSAAAATSNNGTKKNEGNNKVDSKKRAI 299

Query: 410  KIDLDEEEE-----ETKPKIVTNPRSESDGYVEVVGCKPGTGIIKPKEETNGEGEVMDVK 246
            K +  ++ E     + + K  T   +  D  VEV+         KPK E +   EVM+ K
Sbjct: 300  KSEFVDDSEAATDAQPQAKAKTKTEAGEDDDVEVMD-------TKPKNEPDDGDEVMETK 352

Query: 245  PSIEAAAKAEIETNGEPEVMDVE 177
            P        + E+NGE EVMD+E
Sbjct: 353  P--------KTESNGEVEVMDIE 367


>gb|ADA70357.1| proliferation cell nuclear antigen [Persea americana]
          Length = 290

 Score =  489 bits (1258), Expect = e-136
 Identities = 245/289 (84%), Positives = 269/289 (93%)
 Frame = -2

Query: 1292 MLELRLVQGSLLKKVMESIKDLVNDANFDCSASGFSLQAMDSSHVALVSLLLRSEGFEHY 1113
            MLELRLVQGSLLKKV+ES+KDLV DANFDCSA+GFSLQAMDSSHVALV+LLLRSEGFEHY
Sbjct: 1    MLELRLVQGSLLKKVLESVKDLVTDANFDCSATGFSLQAMDSSHVALVALLLRSEGFEHY 60

Query: 1112 RCDRNLSMGMNLGNMAKMLRCAGNDDIVTIKADDGGDCVTFMFESPNQDKIADFEMKLMD 933
            RCDRNLSMGMNL NM+KML+CAGNDDI+TIKADDG D VTFMFESP QDKIADFEMKLMD
Sbjct: 61   RCDRNLSMGMNLNNMSKMLKCAGNDDIITIKADDGSDTVTFMFESPTQDKIADFEMKLMD 120

Query: 932  IDSEHLGIPEAEYEAIVRMPSSEFARICKDLSTIGDTVVISVTKEGIKFSTKGDIGTANI 753
            IDSEHLGIPEAEY AIVRMPS+EFARICKDLS+IGDTVVISVTKEG+KFST+GDIGTANI
Sbjct: 121  IDSEHLGIPEAEYHAIVRMPSAEFARICKDLSSIGDTVVISVTKEGVKFSTRGDIGTANI 180

Query: 752  VCRQNTSVDKPEEATIIEMETPVSLTFALRYMNSFTKATPLASQVTVSLSSELPIVVEYK 573
            VCRQNTSVDKPEE+TIIEM  PVSLTFALRYMNSFTKATPLA+ VT+SLSSELP+VVEYK
Sbjct: 181  VCRQNTSVDKPEESTIIEMNEPVSLTFALRYMNSFTKATPLANSVTISLSSELPVVVEYK 240

Query: 572  IAEMGYLRFYLAPKIEEDEEMGGYQAEPVETKKTSEKKPKAEPKSNEEP 426
            IAEMGY+RFYLAPKIE+DEE    +A+P   KK ++K+PKAE ++  EP
Sbjct: 241  IAEMGYIRFYLAPKIEDDEEGMQAEAQPPPEKK-AKKEPKAEAEAKSEP 288


>gb|AAG24908.1|AF305075_1 proliferating cell nuclear antigen [Nicotiana benthamiana]
          Length = 264

 Score =  474 bits (1219), Expect = e-131
 Identities = 232/260 (89%), Positives = 253/260 (97%)
 Frame = -2

Query: 1292 MLELRLVQGSLLKKVMESIKDLVNDANFDCSASGFSLQAMDSSHVALVSLLLRSEGFEHY 1113
            MLELRLVQGSLLKKV+ESIK+LVNDANFDCSA+GFSLQAMDSSHVALV+LLLRSEGFEHY
Sbjct: 1    MLELRLVQGSLLKKVLESIKELVNDANFDCSATGFSLQAMDSSHVALVALLLRSEGFEHY 60

Query: 1112 RCDRNLSMGMNLGNMAKMLRCAGNDDIVTIKADDGGDCVTFMFESPNQDKIADFEMKLMD 933
            RCDRN+SMGMNLGNMAKML+CAGNDDI+T+KADDG D VTFMFESP QDKIADFEMKLMD
Sbjct: 61   RCDRNISMGMNLGNMAKMLKCAGNDDIITLKADDGSDTVTFMFESPTQDKIADFEMKLMD 120

Query: 932  IDSEHLGIPEAEYEAIVRMPSSEFARICKDLSTIGDTVVISVTKEGIKFSTKGDIGTANI 753
            IDSEHLGIPEAEY AIVRMPS+EFARICKDLS+IGDTVVISVTKEG+KFST+GDIGTAN+
Sbjct: 121  IDSEHLGIPEAEYHAIVRMPSAEFARICKDLSSIGDTVVISVTKEGVKFSTRGDIGTANV 180

Query: 752  VCRQNTSVDKPEEATIIEMETPVSLTFALRYMNSFTKATPLASQVTVSLSSELPIVVEYK 573
            VCRQNT+VDKPEEAT+IEM  PVSLTFALRY+NSFTKATPL++ VT+SLSSELP+VVEYK
Sbjct: 181  VCRQNTTVDKPEEATVIEMNEPVSLTFALRYLNSFTKATPLSNTVTISLSSELPVVVEYK 240

Query: 572  IAEMGYLRFYLAPKIEEDEE 513
            IAEMGY+RFYLAPKIEEDEE
Sbjct: 241  IAEMGYIRFYLAPKIEEDEE 260


>sp|Q00268.1|PCNA1_DAUCA RecName: Full=Proliferating cell nuclear antigen; Short=PCNA;
            AltName: Full=Cyclin
          Length = 264

 Score =  473 bits (1218), Expect = e-131
 Identities = 233/260 (89%), Positives = 253/260 (97%)
 Frame = -2

Query: 1292 MLELRLVQGSLLKKVMESIKDLVNDANFDCSASGFSLQAMDSSHVALVSLLLRSEGFEHY 1113
            MLELRLVQGSLLKKVM+SIKDLVNDANFDCSA+GFSLQAMDSSHVALV++LLRSEGFEHY
Sbjct: 1    MLELRLVQGSLLKKVMDSIKDLVNDANFDCSATGFSLQAMDSSHVALVAVLLRSEGFEHY 60

Query: 1112 RCDRNLSMGMNLGNMAKMLRCAGNDDIVTIKADDGGDCVTFMFESPNQDKIADFEMKLMD 933
            RCDRN+SMGMNLGNMAKML+CAGNDDI+TIKADDG D VTFMFESP QDKIADFEMKLMD
Sbjct: 61   RCDRNISMGMNLGNMAKMLKCAGNDDIITIKADDGSDTVTFMFESPTQDKIADFEMKLMD 120

Query: 932  IDSEHLGIPEAEYEAIVRMPSSEFARICKDLSTIGDTVVISVTKEGIKFSTKGDIGTANI 753
            IDSEHLGIPEAEY AIVRMPS+EFARICKDLS+IGDTVVISVTKEG+KFST+GDIGTANI
Sbjct: 121  IDSEHLGIPEAEYHAIVRMPSAEFARICKDLSSIGDTVVISVTKEGVKFSTRGDIGTANI 180

Query: 752  VCRQNTSVDKPEEATIIEMETPVSLTFALRYMNSFTKATPLASQVTVSLSSELPIVVEYK 573
            VCRQNT+VDKPEEAT+IEM  PVSLTFALRYMNSFTKA+PL+S VT+SLSSELP+VVEYK
Sbjct: 181  VCRQNTTVDKPEEATVIEMNEPVSLTFALRYMNSFTKASPLSSTVTISLSSELPVVVEYK 240

Query: 572  IAEMGYLRFYLAPKIEEDEE 513
            IAEMGY+RFYLAPKIEE+E+
Sbjct: 241  IAEMGYIRFYLAPKIEEEED 260


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