BLASTX nr result

ID: Atractylodes21_contig00003175 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00003175
         (751 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276435.1| PREDICTED: zinc finger CCCH domain-containin...   155   1e-35
emb|CAN78551.1| hypothetical protein VITISV_003243 [Vitis vinifera]   155   1e-35
ref|XP_002516892.1| nucleic acid binding protein, putative [Rici...   151   1e-34
ref|XP_003550189.1| PREDICTED: zinc finger CCCH domain-containin...   144   2e-32
ref|XP_002330352.1| predicted protein [Populus trichocarpa] gi|2...   144   3e-32

>ref|XP_002276435.1| PREDICTED: zinc finger CCCH domain-containing protein 32 [Vitis
           vinifera] gi|297736890|emb|CBI26091.3| unnamed protein
           product [Vitis vinifera]
          Length = 478

 Score =  155 bits (391), Expect = 1e-35
 Identities = 73/88 (82%), Positives = 81/88 (92%)
 Frame = -1

Query: 751 NFVLSPMGLPLRPGAPICLHYAEKGGCRFGPSCKFDHPMGTLSYSPSASSLADMPVAPYP 572
           N VLSPMGLPLRPGAP C HYA++G C+FGP+CKFDHPMGTLSYSPSASSLADMPVAPYP
Sbjct: 338 NCVLSPMGLPLRPGAPQCTHYAQRGICKFGPTCKFDHPMGTLSYSPSASSLADMPVAPYP 397

Query: 571 VGAFIGTLAPSSSSSELRQELISASNKE 488
           VG+ +GTLAPSSSSS+LR ELIS S+KE
Sbjct: 398 VGSSMGTLAPSSSSSDLRPELISGSSKE 425


>emb|CAN78551.1| hypothetical protein VITISV_003243 [Vitis vinifera]
          Length = 518

 Score =  155 bits (391), Expect = 1e-35
 Identities = 73/88 (82%), Positives = 81/88 (92%)
 Frame = -1

Query: 751 NFVLSPMGLPLRPGAPICLHYAEKGGCRFGPSCKFDHPMGTLSYSPSASSLADMPVAPYP 572
           N VLSPMGLPLRPGAP C HYA++G C+FGP+CKFDHPMGTLSYSPSASSLADMPVAPYP
Sbjct: 378 NCVLSPMGLPLRPGAPQCTHYAQRGICKFGPTCKFDHPMGTLSYSPSASSLADMPVAPYP 437

Query: 571 VGAFIGTLAPSSSSSELRQELISASNKE 488
           VG+ +GTLAPSSSSS+LR ELIS S+KE
Sbjct: 438 VGSSMGTLAPSSSSSDLRPELISGSSKE 465


>ref|XP_002516892.1| nucleic acid binding protein, putative [Ricinus communis]
           gi|223543980|gb|EEF45506.1| nucleic acid binding
           protein, putative [Ricinus communis]
          Length = 481

 Score =  151 bits (382), Expect = 1e-34
 Identities = 69/88 (78%), Positives = 80/88 (90%)
 Frame = -1

Query: 751 NFVLSPMGLPLRPGAPICLHYAEKGGCRFGPSCKFDHPMGTLSYSPSASSLADMPVAPYP 572
           N VLSPMGLPLRPGAP C HY ++G C+FGP+CKFDHPMG+LSYSPSASSL+DMPVAPYP
Sbjct: 335 NVVLSPMGLPLRPGAPHCTHYTQRGQCKFGPACKFDHPMGSLSYSPSASSLSDMPVAPYP 394

Query: 571 VGAFIGTLAPSSSSSELRQELISASNKE 488
           VG+ +GTLAPSSSSSELR EL+S S+K+
Sbjct: 395 VGSSMGTLAPSSSSSELRPELVSGSSKD 422


>ref|XP_003550189.1| PREDICTED: zinc finger CCCH domain-containing protein 58-like
           [Glycine max]
          Length = 484

 Score =  144 bits (364), Expect = 2e-32
 Identities = 68/85 (80%), Positives = 76/85 (89%)
 Frame = -1

Query: 742 LSPMGLPLRPGAPICLHYAEKGGCRFGPSCKFDHPMGTLSYSPSASSLADMPVAPYPVGA 563
           LSP+GLPLRPGAP C HY ++G C+FG +CKFDHPMG+LSYSPSASSLADMPVAPYPVG+
Sbjct: 343 LSPVGLPLRPGAPPCTHYTQRGVCKFGSACKFDHPMGSLSYSPSASSLADMPVAPYPVGS 402

Query: 562 FIGTLAPSSSSSELRQELISASNKE 488
            IGTLAPSSSSSELR EL + SNKE
Sbjct: 403 SIGTLAPSSSSSELRPELGAGSNKE 427


>ref|XP_002330352.1| predicted protein [Populus trichocarpa] gi|222871556|gb|EEF08687.1|
           predicted protein [Populus trichocarpa]
          Length = 477

 Score =  144 bits (362), Expect = 3e-32
 Identities = 67/88 (76%), Positives = 77/88 (87%)
 Frame = -1

Query: 751 NFVLSPMGLPLRPGAPICLHYAEKGGCRFGPSCKFDHPMGTLSYSPSASSLADMPVAPYP 572
           N VLSP+GLPLRPGAP C HY ++G C+FGP+CKFDHPMGTLSYSPSASSLADMPVAPY 
Sbjct: 336 NVVLSPIGLPLRPGAPTCSHYTQRGQCKFGPACKFDHPMGTLSYSPSASSLADMPVAPYL 395

Query: 571 VGAFIGTLAPSSSSSELRQELISASNKE 488
           VG+ IGTLAPSSSSS+LR + IS  +K+
Sbjct: 396 VGSSIGTLAPSSSSSDLRSKPISGPSKD 423


Top