BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00003157
         (2651 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAD43283.1| bromodomain-containing RNA-binding protein 1 [So...   510   e-142
ref|NP_001234374.1| PSTVd RNA-binding protein Virp1d [Solanum ly...   502   e-139
emb|CAD43286.1| bromodomain-containing RNA-binding protein 1 [Ni...   500   e-139
emb|CAD43285.1| bromodomain-containing RNA-binding protein 2 [Ni...   496   e-137
emb|CAD43287.1| bromodomain-containing RNA-binding protein 2 [Ni...   495   e-137

>emb|CAD43283.1| bromodomain-containing RNA-binding protein 1 [Solanum tuberosum]
          Length = 602

 Score =  510 bits (1313), Expect = e-142
 Identities = 288/513 (56%), Positives = 352/513 (68%), Gaps = 32/513 (6%)
 Frame = -2

Query: 1543 HNHNSHPVDSCGVVVSQAASDDAYSFNQRPIETSGGGRYGNSFNHGGYVSYNVAACSRSE 1364
            H  N   +D     V+Q ASDDAYSFNQRPIE++      +  N GGY+++NV + ++ E
Sbjct: 52   HTSNGRHIDE-SPAVTQTASDDAYSFNQRPIESTTNV---DGLNFGGYLTFNVVSYNKGE 107

Query: 1363 INELRKKLLSDLERIRILNDRIQAGDL---NPRSSNGKFKKLSGNKR--------QPSSM 1217
            +NELR +LL+++E+IR L DRI++G L   NPRS  GK KKLSGNKR         P  +
Sbjct: 108  VNELRSRLLAEVEQIRNLKDRIESGQLSTTNPRSQ-GKSKKLSGNKRPTPSGSSKDPKKL 166

Query: 1216 PFGSSNKESKHFRQGLVNGSAGGEAEENLLKMCRQVLTKLMKHKLSWVFNKPVDAVALGL 1037
            P G  N+   +F   +  G       E+++K CRQ+L KLMKHK  W+FN PVDA ALGL
Sbjct: 167  PNGVENR---NFGNPVGGGGVKAIGTESMMKECRQILAKLMKHKNGWIFNIPVDAEALGL 223

Query: 1036 HDYHQIIKRPMDLGTVKSNLSKNVYASPLDFASDVRLVFENAMLYNPRTDEVHGMADQLL 857
            HDYHQIIKRP+DLGTVKSNL+KN Y SP +FA+DVRL F NA+LYNP+TD+V+G A+QLL
Sbjct: 224  HDYHQIIKRPIDLGTVKSNLAKNFYPSPFEFAADVRLTFNNALLYNPKTDQVNGFAEQLL 283

Query: 856  THFEELFRPIQAKL-ATHHHVNEFSAVDELDGSSWDDIQTPERSKKLKSSGPVVPSISNK 680
              FE++FRP+Q K+        ++  VDEL GSSW+ I TPER KK K++   VP IS K
Sbjct: 284  GRFEDMFRPLQDKMNKLEGGRRDYHPVDELQGSSWNHIPTPERVKKPKATP--VPHISKK 341

Query: 679  Q----NHSTASNPLIPPVV-------QSPVRTPSPMQAAEPIKPSSASTRGAVGKQPKPR 533
            Q    NHS+AS P +P          QSP+ TPSP++A  P KP SA+   A+GKQPKPR
Sbjct: 342  QERMQNHSSASTPSLPVPPPNPPARQQSPLSTPSPVRAP-PSKPESAAKVPAMGKQPKPR 400

Query: 532  AKDPNKREMNMEEKQKLGLGLQSLPPEKMPQLVQIIRKRNDHLAQEGDEIELDIEALDTE 353
            AKDPNKR MNMEEK KLG+GLQSLP EKMPQLVQIIRKRN+HLAQ+GDEIELDIEALDTE
Sbjct: 401  AKDPNKRVMNMEEKHKLGVGLQSLPQEKMPQLVQIIRKRNEHLAQDGDEIELDIEALDTE 460

Query: 352  TLWELDRFVTNWKKLVSKTKRQALLVN--------XXXXXXXXXXXXXXXXXXSEKVDGM 197
            TLWELDRFVTNWKK+VSKTKRQAL++N                          SEK D  
Sbjct: 461  TLWELDRFVTNWKKMVSKTKRQALMINNLGPPSASAAASAATTSVAEADGPTTSEKNDSF 520

Query: 196  KKNKK-EAGEEDVDIGDEMPESSFPHVEIEKDD 101
            KK KK + GEEDV+I D+ P + FP VEIEKD+
Sbjct: 521  KKPKKGDVGEEDVEIEDDEPATHFPPVEIEKDE 553


>ref|NP_001234374.1| PSTVd RNA-binding protein Virp1d [Solanum lycopersicum]
            gi|10179602|gb|AAG13810.1|AF190891_1 PSTVd RNA-binding
            protein Virp1a [Solanum lycopersicum]
            gi|10179604|gb|AAG13811.1|AF190892_1 PSTVd RNA-binding
            protein Virp1b [Solanum lycopersicum]
            gi|10179606|gb|AAG13812.1|AF190893_1 PSTVd RNA-binding
            protein Virp1c [Solanum lycopersicum]
            gi|10179608|gb|AAG13813.1|AF190894_1 PSTVd RNA-binding
            protein Virp1d [Solanum lycopersicum]
            gi|13186132|emb|CAC33448.1| PSTVd RNA-biding protein,
            Virp1 [Solanum lycopersicum] gi|13186134|emb|CAC33449.1|
            PSTVd RNA-biding protein, Virp1 [Solanum lycopersicum]
            gi|13186136|emb|CAC33450.1| PSTVd RNA-biding protein,
            Virp1 [Solanum lycopersicum] gi|13186138|emb|CAC33451.1|
            PSTVd RNA-biding protein, Virp1 [Solanum lycopersicum]
          Length = 602

 Score =  502 bits (1293), Expect = e-139
 Identities = 288/513 (56%), Positives = 352/513 (68%), Gaps = 32/513 (6%)
 Frame = -2

Query: 1543 HNHNSHPVDSCGVVVSQAASDDAYSFNQRPIETSGGGRYGNSFNHGGYVSYNVAACSRSE 1364
            H  N   +D     V+Q ASDDAYSFNQRPIE++      +  N GGY+++NV + +++E
Sbjct: 52   HTSNGRHMDD-SPAVTQTASDDAYSFNQRPIESTTNV---DGLNFGGYLTFNVVSYNKAE 107

Query: 1363 INELRKKLLSDLERIRILNDRIQAGDL---NPRSSNGKFKKLSGNKRQPSSMPFGSSNKE 1193
            +NELR +L++++E+IR L DRI++G L   NPRS  GK KK SGNKR   S     S+K+
Sbjct: 108  VNELRSRLMAEVEQIRNLKDRIESGQLSTTNPRSQ-GKSKKQSGNKRPTPS----GSSKD 162

Query: 1192 SKHFRQGLVN---GSAGGE------AEENLLKMCRQVLTKLMKHKLSWVFNKPVDAVALG 1040
             K    G+ N   G+ GG         E+++K CRQ+L KLMKHK  W+FN PVDA ALG
Sbjct: 163  LKKLPNGVENRNFGNPGGVDGVKAIGTESMMKECRQILAKLMKHKNGWIFNIPVDAEALG 222

Query: 1039 LHDYHQIIKRPMDLGTVKSNLSKNVYASPLDFASDVRLVFENAMLYNPRTDEVHGMADQL 860
            LHDYHQIIKRPMDLGTVKSNL+KN Y SP +FA+DVRL F NA+LYNP+TD+V+  A+QL
Sbjct: 223  LHDYHQIIKRPMDLGTVKSNLAKNFYPSPFEFAADVRLTFNNALLYNPKTDQVNAFAEQL 282

Query: 859  LTHFEELFRPIQAKL-ATHHHVNEFSAVDELDGSSWDDIQTPERSKKLKSSGPVVPSISN 683
            L  FE++FRP+Q K+        ++  VDEL GSSW+ I TPER KK K +   VP+IS 
Sbjct: 283  LGRFEDMFRPLQDKMNKLEGGRRDYHPVDELQGSSWNHIPTPERVKKPKPTP--VPNISK 340

Query: 682  KQ----NHSTASNPLIPPVV-------QSPVRTPSPMQAAEPIKPSSASTRGAVGKQPKP 536
            KQ    NHS+AS P +P          QSP+ TPSP++A    KP SA+    +GKQPKP
Sbjct: 341  KQERMQNHSSASTPSLPVPPPNPPARQQSPLSTPSPVRAPAA-KPQSAAKVPTMGKQPKP 399

Query: 535  RAKDPNKREMNMEEKQKLGLGLQSLPPEKMPQLVQIIRKRNDHLAQEGDEIELDIEALDT 356
            RAKDPNKREMNMEEK KLG+GLQSLP EKMPQLVQIIRKRN+HLAQ+GDEIELDIEALDT
Sbjct: 400  RAKDPNKREMNMEEKHKLGVGLQSLPQEKMPQLVQIIRKRNEHLAQDGDEIELDIEALDT 459

Query: 355  ETLWELDRFVTNWKKLVSKTKRQALLVN-------XXXXXXXXXXXXXXXXXXSEKVDGM 197
            ETLWELDRFVTNWKK+VSKTKRQAL+ N                         SEK D  
Sbjct: 460  ETLWELDRFVTNWKKMVSKTKRQALMNNLGPPSASAAASAATTSVAEADGPTTSEKNDSF 519

Query: 196  KKNKK-EAGEEDVDIGDEMPESSFPHVEIEKDD 101
            KK KK + GEEDV+I D+ P + FP VEIEKD+
Sbjct: 520  KKAKKGDVGEEDVEIEDDEPATHFPPVEIEKDE 552


>emb|CAD43286.1| bromodomain-containing RNA-binding protein 1 [Nicotiana tabacum]
          Length = 617

 Score =  500 bits (1288), Expect = e-139
 Identities = 300/531 (56%), Positives = 357/531 (67%), Gaps = 45/531 (8%)
 Frame = -2

Query: 1561 AINGRPHNHNSHPVDSCGVVVSQAASDDAYSFNQRPIETSGGGRYGNSFNHGGYVSYNVA 1382
            A NGR HN  S         V+Q ASDDAYSFNQRPIE+S      +  N GGY++YNVA
Sbjct: 53   ASNGR-HNDESP-------AVTQTASDDAYSFNQRPIESSTNV---DGLNLGGYMTYNVA 101

Query: 1381 ACSRSEINELRKKLLSDLERIRILNDRIQAGDL---NPRSSNGKFKKLSGNKRQPSSMPF 1211
            + +++E++ELR +L+++LE+IR L DRI++G L   NPRS +GK KKLSGNKR   S   
Sbjct: 102  SYNKTELHELRSRLVAELEQIRNLKDRIESGQLSTSNPRS-HGKSKKLSGNKRPTPS--- 157

Query: 1210 GSSNKESKHFRQGLVN------GSAGGE----AEENLLKMCRQVLTKLMKHKLSWVFNKP 1061
              S+K+ K    G+ N      G  GG       EN++K CRQVL KLMKHK  W+FN P
Sbjct: 158  -GSSKDRKKLLNGVDNRNFGNPGGGGGVKGIIGMENMMKECRQVLAKLMKHKSGWIFNTP 216

Query: 1060 VDAVALGLHDYHQIIKRPMDLGTVKSNLSKNVYASPLDFASDVRLVFENAMLYNPRTDEV 881
            VDA A+GLHDYHQIIKRPMDLGTVKSNL  N Y +P +FA+DVRL F NA+LYNP+TD+V
Sbjct: 217  VDAKAMGLHDYHQIIKRPMDLGTVKSNLINNFYPTPFEFAADVRLTFNNALLYNPKTDQV 276

Query: 880  HGMADQLLTHFEELFRPIQAKLATHHHVN---EFSAVDELDGSSWDDIQTPERSKKLKSS 710
            HG A+QLL  FE++FRPIQ KL          +F A+DEL GSSW+ I TPER KK K +
Sbjct: 277  HGFAEQLLARFEDMFRPIQDKLNKLDGGTGRRDFRAIDELQGSSWNHIPTPERVKKPKPT 336

Query: 709  GPVVPSISNKQ-----NHSTASNPLIP--------PVV--QSPVRTPSPMQAAEPIKPSS 575
                P IS KQ     NHS+AS P +P        PVV  QSP+ TPSP++A    KP S
Sbjct: 337  P--APHISKKQERMMQNHSSASTPSLPVQQPPDNPPVVRQQSPLSTPSPVRAPPAAKPQS 394

Query: 574  --ASTRGAVGKQPKPRAKDPNKREMNMEEKQKLGLGLQSLPPEKMPQLVQIIRKRNDHLA 401
              A+    +GKQPKPRAKDPNKREM+MEEK KLG+GLQSLP EKMPQLVQIIRKRN+HLA
Sbjct: 395  SVAAKVPPMGKQPKPRAKDPNKREMSMEEKHKLGVGLQSLPQEKMPQLVQIIRKRNEHLA 454

Query: 400  QEGDEIELDIEALDTETLWELDRFVTNWKKLVSKTKRQALLVN---------XXXXXXXX 248
            Q+GDEIELDIEALDTETLWELDRFVTNWKK+VSKTKRQAL+ N                 
Sbjct: 455  QDGDEIELDIEALDTETLWELDRFVTNWKKMVSKTKRQALINNLGQPPSASAAASAATTT 514

Query: 247  XXXXXXXXXXSEKVDGMKKNKK--EAG-EEDVDIGDEMPESSFPHVEIEKD 104
                      SEK D  KK KK  +AG E+DV+I D+ P + FP VEIE D
Sbjct: 515  SVAEADGPSTSEKNDSFKKPKKGGDAGDEDDVEIEDDEPATHFPPVEIEID 565


>emb|CAD43285.1| bromodomain-containing RNA-binding protein 2 [Nicotiana benthamiana]
          Length = 613

 Score =  496 bits (1276), Expect = e-137
 Identities = 290/509 (56%), Positives = 350/509 (68%), Gaps = 42/509 (8%)
 Frame = -2

Query: 1501 VSQAASDDAYSFNQRPIETSGGGRYGNSFNHGGYVSYNVAACSRSEINELRKKLLSDLER 1322
            V+Q ASDDAYSFNQRPIE+S      +  N GGY++YNVA+ S++E+++LR +L+++LE+
Sbjct: 65   VTQTASDDAYSFNQRPIESSANV---DGLNLGGYMTYNVASYSKTELHDLRSRLVAELEQ 121

Query: 1321 IRILNDRIQAGDL---NPRSSNGKFKKLSGNKR--------QPSSMPFGSSNKESKHFRQ 1175
            IR L DRI++G L   NPRS +GK KKLSGNKR         P  +P G  N+   +   
Sbjct: 122  IRNLKDRIESGQLSTSNPRS-HGKSKKLSGNKRPTPSGSSKDPKKLPNGVDNRNFGNPGG 180

Query: 1174 GLVNGSAGGEAEENLLKMCRQVLTKLMKHKLSWVFNKPVDAVALGLHDYHQIIKRPMDLG 995
            G V G  G    EN++K CRQVL KLMKHK  W+FN PVDA ALGLHDY QIIKRPMDLG
Sbjct: 181  GGVKGIIG---MENMMKECRQVLGKLMKHKSGWIFNTPVDAEALGLHDYRQIIKRPMDLG 237

Query: 994  TVKSNLSKNVYASPLDFASDVRLVFENAMLYNPRTDEVHGMADQLLTHFEELFRPIQAKL 815
            TVKSNLS N+Y +P +FA+DVRL F NA+LYNP+TD+VH  A+ LLT FE++FRP Q KL
Sbjct: 238  TVKSNLSNNLYPTPFEFAADVRLTFNNALLYNPKTDQVHVFAELLLTRFEDMFRPFQDKL 297

Query: 814  ATHHHVN---EFSAVDELDGSSWDDIQTPERSKKLKSSGPVVPSISNKQ-----NHSTAS 659
                  +   +F A+DEL GSSW+ I TPER KK K +    P IS KQ     NHS+AS
Sbjct: 298  NKLDGGSGRRDFHAIDELQGSSWNHIPTPERVKKPKPTP--APHISKKQERMMQNHSSAS 355

Query: 658  NPLIP--------PVVQ--SPVRTPSPMQAAEPIKPSS--ASTRGAVGKQPKPRAKDPNK 515
             P +P        PVVQ  SP+ TPSP++A    KP S  A+    + KQPKPRAKDPNK
Sbjct: 356  TPSLPVQQPPDNPPVVQQQSPLSTPSPVRAPPAAKPQSSVAAKVPPMEKQPKPRAKDPNK 415

Query: 514  REMNMEEKQKLGLGLQSLPPEKMPQLVQIIRKRNDHLAQEGDEIELDIEALDTETLWELD 335
            REM+MEEK KLG+GLQSLP EKMPQLVQIIRKRN+HLAQ+GDEIELDIEALDTETLWELD
Sbjct: 416  REMSMEEKHKLGVGLQSLPQEKMPQLVQIIRKRNEHLAQDGDEIELDIEALDTETLWELD 475

Query: 334  RFVTNWKKLVSKTKRQALLVN--------XXXXXXXXXXXXXXXXXXSEKVDGMKKNKK- 182
            RFVTNWKK+VSKTKRQAL+ N                          SEK D  KK KK 
Sbjct: 476  RFVTNWKKMVSKTKRQALINNLGQPPSASAAASAATTSVAEADGPSTSEKNDSFKKPKKG 535

Query: 181  -EAG-EEDVDIGDEMPESSFPHVEIEKDD 101
             +AG E+DV+I D+ P + FP VEI+KD+
Sbjct: 536  GDAGDEDDVEIEDDEPATQFPPVEIDKDE 564


>emb|CAD43287.1| bromodomain-containing RNA-binding protein 2 [Nicotiana tabacum]
          Length = 616

 Score =  495 bits (1275), Expect = e-137
 Identities = 290/509 (56%), Positives = 348/509 (68%), Gaps = 43/509 (8%)
 Frame = -2

Query: 1501 VSQAASDDAYSFNQRPIETSGGGRYGNSFNHGGYVSYNVAACSRSEINELRKKLLSDLER 1322
            V+Q ASDDAYSFNQRPIE+S      +  N GGY++YN A+ +++E++ELR +L+++LE+
Sbjct: 65   VTQTASDDAYSFNQRPIESSTNV---DGLNLGGYMTYNXASYNKTELHELRSRLVAELEQ 121

Query: 1321 IRILNDRIQAGDL---NPRSSNGKFKKLSGNKR--------QPSSMPFGSSNKESKHFRQ 1175
            IR L DRI++G L   NPRS +GK KKLSGNKR         P  +P G  N+   +   
Sbjct: 122  IRNLKDRIESGQLSTSNPRS-HGKSKKLSGNKRPTPSGSSKDPKKLPNGVDNRNFGNPGG 180

Query: 1174 GLVNGSAGGEAEENLLKMCRQVLTKLMKHKLSWVFNKPVDAVALGLHDYHQIIKRPMDLG 995
            G V G  G   +EN++K C QVL KLMKHK  W+FN PVDA ALGLHDYHQIIKRP DLG
Sbjct: 181  GGVKGIIG---KENMMKECTQVLGKLMKHKSGWIFNTPVDAEALGLHDYHQIIKRPXDLG 237

Query: 994  TVKSNLSKNVYASPLDFASDVRLVFENAMLYNPRTDEVHGMADQLLTHFEELFRPIQAKL 815
            T KSNLS N Y +P +FA+DVRL F NA+LYNP+TD+VHG A+QLL  FE++FRPIQ KL
Sbjct: 238  TXKSNLSNNFYPTPFEFAADVRLTFNNALLYNPKTDQVHGFAEQLLARFEDMFRPIQDKL 297

Query: 814  ATHHHVN---EFSAVDELDGSSWDDIQTPERSKKLKSSGPVVPSISNKQ-----NHSTAS 659
                  +   +F A+DEL GSSW+ I TPER KK K +    P IS KQ     NHS+AS
Sbjct: 298  NKLDGGSGRRDFHAIDELQGSSWNHIPTPERVKKPKPTP--APHISKKQERMMQNHSSAS 355

Query: 658  NPLIP--------PVV--QSPVRTPSPMQAAEPIKPSS--ASTRGAVGKQPKPRAKDPNK 515
             P +P        PVV  QSP+ TPSP++A    KP S  A+    +GKQPKPRAKDPNK
Sbjct: 356  TPSLPVQQPPDNPPVVRQQSPLSTPSPVRAPPAAKPQSSVAAKVPPMGKQPKPRAKDPNK 415

Query: 514  REMNMEEKQKLGLGLQSLPPEKMPQLVQIIRKRNDHLAQEGDEIELDIEALDTETLWELD 335
            REM+MEEK KLG+GLQSLP EKMPQLVQIIRKRN+HLAQ+GDEIELDIEALDTETLWELD
Sbjct: 416  REMSMEEKHKLGVGLQSLPQEKMPQLVQIIRKRNEHLAQDGDEIELDIEALDTETLWELD 475

Query: 334  RFVTNWKKLVSKTKRQALLVN---------XXXXXXXXXXXXXXXXXXSEKVDGMKKNKK 182
            RFVTNWKK+VSKTKRQAL+ N                           SEK D  KK KK
Sbjct: 476  RFVTNWKKMVSKTKRQALINNLGQPPSASAAASAATTTSVAEADGPSTSEKNDSFKKPKK 535

Query: 181  --EAG-EEDVDIGDEMPESSFPHVEIEKD 104
              +AG E+DV+I D+ P + FP VEIE D
Sbjct: 536  GGDAGDEDDVEIEDDEPATHFPPVEIEID 564