BLASTX nr result
ID: Atractylodes21_contig00003143
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atractylodes21_contig00003143
(856 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002526450.1| 60S ribosomal protein L3, putative [Ricinus ... 51 2e-18
ref|XP_003637108.1| hypothetical protein MTR_072s1001, partial [... 52 2e-18
ref|XP_003540543.1| PREDICTED: 60S ribosomal protein L3-like [Gl... 51 3e-18
gb|ACU20789.1| unknown [Glycine max] 51 3e-18
emb|CBI18223.3| unnamed protein product [Vitis vinifera] 52 5e-18
>ref|XP_002526450.1| 60S ribosomal protein L3, putative [Ricinus communis]
gi|223534230|gb|EEF35945.1| 60S ribosomal protein L3,
putative [Ricinus communis]
Length = 389
Score = 51.2 bits (121), Expect(4) = 2e-18
Identities = 38/92 (41%), Positives = 44/92 (47%)
Frame = +1
Query: 340 SVKKAFLKYSMKYETEAGKKDIQAQLEKDEKVVQCHPTDTGTPFRYL*ALGGSTKAVTLM 519
S KKAF KYS K+E+E GKKD Q QLEK +K T R + G K L
Sbjct: 125 SKKKAFTKYSKKFESEEGKKDTQVQLEKMKKYCTVIRVLAHTQIRKM--KGLKQKKAHL- 181
Query: 520 *MIKCW*LCVFGFPIRKMKCQVNGGDVAQKVE 615
M+ QVNGGDVAQKV+
Sbjct: 182 -----------------MEIQVNGGDVAQKVD 196
Score = 50.4 bits (119), Expect(4) = 2e-18
Identities = 22/32 (68%), Positives = 28/32 (87%), Gaps = 3/32 (9%)
Frame = +3
Query: 615 DFGYNFFEKQIPVDAVFQKDEMVD---MTKGE 701
DF Y+FFEKQ+P+DAVFQKDEM+D +TKG+
Sbjct: 196 DFAYSFFEKQVPIDAVFQKDEMIDIIGVTKGK 227
Score = 35.4 bits (80), Expect(4) = 2e-18
Identities = 20/35 (57%), Positives = 20/35 (57%), Gaps = 3/35 (8%)
Frame = +3
Query: 246 VTIIEAXXXXXXXXXXYVKTPCGL---NTVWAQHL 341
VTIIE YVKTP GL NTVWAQHL
Sbjct: 76 VTIIETPPMVVVGVVGYVKTPRGLRSLNTVWAQHL 110
Score = 21.2 bits (43), Expect(4) = 2e-18
Identities = 7/9 (77%), Positives = 9/9 (100%)
Frame = +2
Query: 221 AELHKKETC 247
++LHKKETC
Sbjct: 65 SKLHKKETC 73
>ref|XP_003637108.1| hypothetical protein MTR_072s1001, partial [Medicago truncatula]
gi|355503043|gb|AES84246.1| hypothetical protein
MTR_072s1001, partial [Medicago truncatula]
Length = 349
Score = 52.0 bits (123), Expect(4) = 2e-18
Identities = 24/32 (75%), Positives = 28/32 (87%), Gaps = 3/32 (9%)
Frame = +3
Query: 615 DFGYNFFEKQIPVDAVFQKDEMVD---MTKGE 701
D+ YNFFEKQIPVDAVFQKDEM+D +TKG+
Sbjct: 167 DYAYNFFEKQIPVDAVFQKDEMIDIIGVTKGK 198
Score = 49.3 bits (116), Expect(4) = 2e-18
Identities = 38/92 (41%), Positives = 43/92 (46%)
Frame = +1
Query: 340 SVKKAFLKYSMKYETEAGKKDIQAQLEKDEKVVQCHPTDTGTPFRYL*ALGGSTKAVTLM 519
S KKAF KY+ KYET+ GKKDIQ QLEK +K T R L G K L
Sbjct: 96 SKKKAFTKYTKKYETDEGKKDIQTQLEKLKKYATVIRVLAHTQVRKL--KGLKQKKAHL- 152
Query: 520 *MIKCW*LCVFGFPIRKMKCQVNGGDVAQKVE 615
M+ QVNGG V QKV+
Sbjct: 153 -----------------MEIQVNGGTVNQKVD 167
Score = 35.4 bits (80), Expect(4) = 2e-18
Identities = 20/35 (57%), Positives = 20/35 (57%), Gaps = 3/35 (8%)
Frame = +3
Query: 246 VTIIEAXXXXXXXXXXYVKTPCG---LNTVWAQHL 341
VTIIE YVKTP G LNTVWAQHL
Sbjct: 47 VTIIETPPIVVVGVVGYVKTPRGLRTLNTVWAQHL 81
Score = 21.2 bits (43), Expect(4) = 2e-18
Identities = 7/9 (77%), Positives = 9/9 (100%)
Frame = +2
Query: 221 AELHKKETC 247
++LHKKETC
Sbjct: 36 SKLHKKETC 44
>ref|XP_003540543.1| PREDICTED: 60S ribosomal protein L3-like [Glycine max]
Length = 389
Score = 51.2 bits (121), Expect(4) = 3e-18
Identities = 39/92 (42%), Positives = 44/92 (47%)
Frame = +1
Query: 340 SVKKAFLKYSMKYETEAGKKDIQAQLEKDEKVVQCHPTDTGTPFRYL*ALGGSTKAVTLM 519
S KKAF KYS KYETE GKKDI++QLEK +K T R L G K L
Sbjct: 125 SKKKAFTKYSKKYETEEGKKDIESQLEKLKKYATVIRVLAHTQIRKL--KGLKQKKAHL- 181
Query: 520 *MIKCW*LCVFGFPIRKMKCQVNGGDVAQKVE 615
M+ QVNGG V QKV+
Sbjct: 182 -----------------MEIQVNGGTVDQKVD 196
Score = 50.1 bits (118), Expect(4) = 3e-18
Identities = 23/32 (71%), Positives = 28/32 (87%), Gaps = 3/32 (9%)
Frame = +3
Query: 615 DFGYNFFEKQIPVDAVFQKDEMVD---MTKGE 701
D+ Y+FFEKQIPVDAVFQKDEM+D +TKG+
Sbjct: 196 DYAYSFFEKQIPVDAVFQKDEMIDIIGVTKGK 227
Score = 35.0 bits (79), Expect(4) = 3e-18
Identities = 19/35 (54%), Positives = 20/35 (57%), Gaps = 3/35 (8%)
Frame = +3
Query: 246 VTIIEAXXXXXXXXXXYVKTPCG---LNTVWAQHL 341
VTIIE YVKTP G LNT+WAQHL
Sbjct: 76 VTIIETPPLVVVGVVGYVKTPRGLRTLNTIWAQHL 110
Score = 21.2 bits (43), Expect(4) = 3e-18
Identities = 7/9 (77%), Positives = 9/9 (100%)
Frame = +2
Query: 221 AELHKKETC 247
++LHKKETC
Sbjct: 65 SKLHKKETC 73
>gb|ACU20789.1| unknown [Glycine max]
Length = 323
Score = 51.2 bits (121), Expect(4) = 3e-18
Identities = 39/92 (42%), Positives = 44/92 (47%)
Frame = +1
Query: 340 SVKKAFLKYSMKYETEAGKKDIQAQLEKDEKVVQCHPTDTGTPFRYL*ALGGSTKAVTLM 519
S KKAF KYS KYETE GKKDI++QLEK +K T R L G K L
Sbjct: 125 SKKKAFTKYSKKYETEEGKKDIESQLEKLKKYATVIRVLAHTQIRKL--KGLKQKKAHL- 181
Query: 520 *MIKCW*LCVFGFPIRKMKCQVNGGDVAQKVE 615
M+ QVNGG V QKV+
Sbjct: 182 -----------------MEIQVNGGTVDQKVD 196
Score = 50.1 bits (118), Expect(4) = 3e-18
Identities = 23/32 (71%), Positives = 28/32 (87%), Gaps = 3/32 (9%)
Frame = +3
Query: 615 DFGYNFFEKQIPVDAVFQKDEMVD---MTKGE 701
D+ Y+FFEKQIPVDAVFQKDEM+D +TKG+
Sbjct: 196 DYAYSFFEKQIPVDAVFQKDEMIDIIGVTKGK 227
Score = 35.0 bits (79), Expect(4) = 3e-18
Identities = 19/35 (54%), Positives = 20/35 (57%), Gaps = 3/35 (8%)
Frame = +3
Query: 246 VTIIEAXXXXXXXXXXYVKTPCG---LNTVWAQHL 341
VTIIE YVKTP G LNT+WAQHL
Sbjct: 76 VTIIETPPLVVVGVVGYVKTPRGLRTLNTIWAQHL 110
Score = 21.2 bits (43), Expect(4) = 3e-18
Identities = 7/9 (77%), Positives = 9/9 (100%)
Frame = +2
Query: 221 AELHKKETC 247
++LHKKETC
Sbjct: 65 SKLHKKETC 73
>emb|CBI18223.3| unnamed protein product [Vitis vinifera]
Length = 449
Score = 51.6 bits (122), Expect(4) = 5e-18
Identities = 38/92 (41%), Positives = 44/92 (47%)
Frame = +1
Query: 340 SVKKAFLKYSMKYETEAGKKDIQAQLEKDEKVVQCHPTDTGTPFRYL*ALGGSTKAVTLM 519
S KKAF KYS +YETE GKK IQAQLEK +K T R + G K L
Sbjct: 185 SKKKAFTKYSKQYETEEGKKSIQAQLEKMKKYASVIRVLAHTQIRKM--KGLKQKKAHL- 241
Query: 520 *MIKCW*LCVFGFPIRKMKCQVNGGDVAQKVE 615
M+ QVNGG +AQKV+
Sbjct: 242 -----------------MEIQVNGGTIAQKVD 256
Score = 48.9 bits (115), Expect(4) = 5e-18
Identities = 21/32 (65%), Positives = 27/32 (84%), Gaps = 3/32 (9%)
Frame = +3
Query: 615 DFGYNFFEKQIPVDAVFQKDEMVD---MTKGE 701
D+ Y FFEKQ+PVDA+FQKDEM+D +TKG+
Sbjct: 256 DYAYGFFEKQVPVDAIFQKDEMIDIIGVTKGK 287
Score = 35.0 bits (79), Expect(4) = 5e-18
Identities = 19/35 (54%), Positives = 20/35 (57%), Gaps = 3/35 (8%)
Frame = +3
Query: 246 VTIIEAXXXXXXXXXXYVKTPCGL---NTVWAQHL 341
VTI+E YVKTP GL NTVWAQHL
Sbjct: 136 VTIVETPPMVIVGVVAYVKTPRGLRSLNTVWAQHL 170
Score = 21.2 bits (43), Expect(4) = 5e-18
Identities = 7/9 (77%), Positives = 9/9 (100%)
Frame = +2
Query: 221 AELHKKETC 247
++LHKKETC
Sbjct: 125 SKLHKKETC 133