BLASTX nr result

ID: Atractylodes21_contig00003142 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00003142
         (284 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADR71269.1| 60S ribosomal protein L18aA [Hevea brasiliensis]        64   1e-08
ref|XP_002530136.1| 60S ribosomal protein L18a, plant, putative ...    64   1e-08
ref|XP_002298923.1| predicted protein [Populus trichocarpa] gi|1...    62   4e-08
gb|AFK49106.1| unknown [Lotus japonicus]                               62   6e-08
ref|XP_002276545.1| PREDICTED: 60S ribosomal protein L18a isofor...    61   8e-08

>gb|ADR71269.1| 60S ribosomal protein L18aA [Hevea brasiliensis]
          Length = 151

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 26/27 (96%), Positives = 27/27 (100%)
 Frame = +2

Query: 161 PGYAVAEGRPVRERRLPCCGIGIGWFL 241
           PGYAVAEGRPVRERRLPCCGIG+GWFL
Sbjct: 69  PGYAVAEGRPVRERRLPCCGIGVGWFL 95


>ref|XP_002530136.1| 60S ribosomal protein L18a, plant, putative [Ricinus communis]
           gi|223530361|gb|EEF32252.1| 60S ribosomal protein L18a,
           plant, putative [Ricinus communis]
          Length = 166

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 26/27 (96%), Positives = 27/27 (100%)
 Frame = +2

Query: 161 PGYAVAEGRPVRERRLPCCGIGIGWFL 241
           PGYAVAEGRPVRERRLPCCGIG+GWFL
Sbjct: 83  PGYAVAEGRPVRERRLPCCGIGVGWFL 109


>ref|XP_002298923.1| predicted protein [Populus trichocarpa] gi|118486768|gb|ABK95219.1|
           unknown [Populus trichocarpa]
           gi|222846181|gb|EEE83728.1| predicted protein [Populus
           trichocarpa]
          Length = 156

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 26/34 (76%), Positives = 29/34 (85%)
 Frame = +2

Query: 140 SQGPDL*PGYAVAEGRPVRERRLPCCGIGIGWFL 241
           +QG    PGYAVAEGRPVR+RRLPCCG G+GWFL
Sbjct: 66  AQGYQTVPGYAVAEGRPVRQRRLPCCGCGVGWFL 99


>gb|AFK49106.1| unknown [Lotus japonicus]
          Length = 152

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 32/66 (48%), Positives = 39/66 (59%)
 Frame = +2

Query: 44  FQGHDPFFSLDFRVTIRSSPSISGARSVFLARSQGPDL*PGYAVAEGRPVRERRLPCCGI 223
           FQG   ++         S  S  GA + +  + QG    P YAVAEGRPVRERRL CCG+
Sbjct: 28  FQGVANYYPSPPPPNPNSPASNGGAYAYYQGQGQGYHALPVYAVAEGRPVRERRLCCCGL 87

Query: 224 GIGWFL 241
           G+GWFL
Sbjct: 88  GLGWFL 93


>ref|XP_002276545.1| PREDICTED: 60S ribosomal protein L18a isoform 2 [Vitis vinifera]
          Length = 299

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 27/34 (79%), Positives = 27/34 (79%)
 Frame = +2

Query: 140 SQGPDL*PGYAVAEGRPVRERRLPCCGIGIGWFL 241
           S G    PGYAV EGRPVRERRLPCCGIGIGW L
Sbjct: 55  SHGYQTVPGYAVVEGRPVRERRLPCCGIGIGWLL 88


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