BLASTX nr result

ID: Atractylodes21_contig00003083 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00003083
         (1246 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270662.1| PREDICTED: coatomer subunit epsilon-1 isofor...   469   e-130
ref|XP_002317073.1| predicted protein [Populus trichocarpa] gi|2...   461   e-127
ref|XP_004134547.1| PREDICTED: coatomer subunit epsilon-1-like [...   458   e-126
ref|NP_174351.1| coatomer subunit epsilon-1 [Arabidopsis thalian...   446   e-123
gb|AAM65018.1| coatomer-like protein, epsilon subunit [Arabidops...   446   e-123

>ref|XP_002270662.1| PREDICTED: coatomer subunit epsilon-1 isoform 1 [Vitis vinifera]
           gi|297740898|emb|CBI31080.3| unnamed protein product
           [Vitis vinifera]
          Length = 289

 Score =  469 bits (1206), Expect = e-130
 Identities = 232/287 (80%), Positives = 257/287 (89%)
 Frame = +3

Query: 135 AAPDLLFGLRNNFYLGAYQAAINSGDVQNLSEEDAIERDCLIYRSYIALGSYQLVVNEVD 314
           AAPDLLFGLRNNF+LGA+QAAIN+ D+ NLS ED+IERDCL++RSYIALGSYQLV+NE+D
Sbjct: 2   AAPDLLFGLRNNFFLGAFQAAINNSDIPNLSPEDSIERDCLVHRSYIALGSYQLVINEID 61

Query: 315 SSAATPXXXXXXXXXXXXSTDNKETVISSIREWLSDAAIGNNPILRLIAGIIFMHEQDYN 494
           SSAATP            S +NKE+ ISS++E L D AIGNNPILRLIAGI+FMHEQDYN
Sbjct: 62  SSAATPLQAVKLLALYLSSPENKESTISSLKELLGDPAIGNNPILRLIAGIVFMHEQDYN 121

Query: 495 EALKYTNVGGTMELTALNVQIFLKMHRSDYAEKQLRIMQQIDEDHTLTQLATAWLNLAVG 674
           EALK+T+ GGTMEL ALNVQIFLKMHRSDYAEKQL+IMQQ+DEDHTLTQLA AWLNLAVG
Sbjct: 122 EALKHTHPGGTMELHALNVQIFLKMHRSDYAEKQLKIMQQMDEDHTLTQLANAWLNLAVG 181

Query: 675 GSKIQEAYLIFQDFSEKYQMTSLILNGKAVCCMHMGNFDEAESFLLEALNKDAKDPETLA 854
           GSKIQEAYLIFQDFSEKYQMT LILNGKAVCCMHMG+FDEAES LLEALNKDAKDPETLA
Sbjct: 182 GSKIQEAYLIFQDFSEKYQMTGLILNGKAVCCMHMGHFDEAESLLLEALNKDAKDPETLA 241

Query: 855 NLVVCCLHLGKPSSRFLSQLKLSHPEHMLIKRGSTAEESFDRAIQTI 995
           NLVVC LHLGK SSR+LSQLKLSHP+H+L+ R S AEE+FDRA+QTI
Sbjct: 242 NLVVCSLHLGKQSSRYLSQLKLSHPDHVLVTRASAAEEAFDRAVQTI 288


>ref|XP_002317073.1| predicted protein [Populus trichocarpa] gi|222860138|gb|EEE97685.1|
           predicted protein [Populus trichocarpa]
          Length = 290

 Score =  461 bits (1187), Expect = e-127
 Identities = 226/289 (78%), Positives = 256/289 (88%)
 Frame = +3

Query: 129 MAAAPDLLFGLRNNFYLGAYQAAINSGDVQNLSEEDAIERDCLIYRSYIALGSYQLVVNE 308
           MA APD LF LRNNFYLGAYQAAIN+ D+ NLS +DA+ERD L+YRSYIAL SYQLV++E
Sbjct: 1   MAGAPDHLFNLRNNFYLGAYQAAINTSDLPNLSPDDAVERDSLVYRSYIALASYQLVIHE 60

Query: 309 VDSSAATPXXXXXXXXXXXXSTDNKETVISSIREWLSDAAIGNNPILRLIAGIIFMHEQD 488
           +D +AATP            S +NKE+ ISS++EWL+D+AI NN ILRLIAGIIFMHE+D
Sbjct: 61  IDDAAATPLQAVKLLALYLSSPENKESTISSLKEWLADSAIANNAILRLIAGIIFMHEED 120

Query: 489 YNEALKYTNVGGTMELTALNVQIFLKMHRSDYAEKQLRIMQQIDEDHTLTQLATAWLNLA 668
           YNEALK+TN GGTMEL ALNVQIFLKMHRSDYAEKQLRIMQQIDEDHTLTQLATAWLNLA
Sbjct: 121 YNEALKHTNAGGTMELHALNVQIFLKMHRSDYAEKQLRIMQQIDEDHTLTQLATAWLNLA 180

Query: 669 VGGSKIQEAYLIFQDFSEKYQMTSLILNGKAVCCMHMGNFDEAESFLLEALNKDAKDPET 848
           VGGSKIQEAYLIFQDFSEKY MT LILNGKAVCCMHMGNFDEAE+ LLEALNKDAKDPET
Sbjct: 181 VGGSKIQEAYLIFQDFSEKYPMTGLILNGKAVCCMHMGNFDEAETLLLEALNKDAKDPET 240

Query: 849 LANLVVCCLHLGKPSSRFLSQLKLSHPEHMLIKRGSTAEESFDRAIQTI 995
           LANLVVC LH+GK SSR+LSQLKLSHP+H+L+KR S+AE++F+RA+Q++
Sbjct: 241 LANLVVCSLHIGKSSSRYLSQLKLSHPDHVLVKRASSAEDNFERAVQSV 289


>ref|XP_004134547.1| PREDICTED: coatomer subunit epsilon-1-like [Cucumis sativus]
           gi|449490635|ref|XP_004158662.1| PREDICTED: coatomer
           subunit epsilon-1-like [Cucumis sativus]
          Length = 289

 Score =  458 bits (1178), Expect = e-126
 Identities = 225/287 (78%), Positives = 252/287 (87%)
 Frame = +3

Query: 135 AAPDLLFGLRNNFYLGAYQAAINSGDVQNLSEEDAIERDCLIYRSYIALGSYQLVVNEVD 314
           AAPD LF LRNNFYLGAYQAAIN+ D+ NLS +D IERD +++RSYIALGSYQL ++E+D
Sbjct: 2   AAPDHLFNLRNNFYLGAYQAAINNSDLPNLSPDDVIERDSIVFRSYIALGSYQLAISEID 61

Query: 315 SSAATPXXXXXXXXXXXXSTDNKETVISSIREWLSDAAIGNNPILRLIAGIIFMHEQDYN 494
           SSA TP               +KE+ I+S++EWLSD AIGNN  LRLIAGIIFMHEQDYN
Sbjct: 62  SSAPTPLQAVKLLALYLSDPSSKESTIASLQEWLSDPAIGNNSTLRLIAGIIFMHEQDYN 121

Query: 495 EALKYTNVGGTMELTALNVQIFLKMHRSDYAEKQLRIMQQIDEDHTLTQLATAWLNLAVG 674
           EALK+TN GGTMEL ALNVQIFLKMHRSDYAE+QLR+MQQIDEDHTLTQLA AWLNLAVG
Sbjct: 122 EALKHTNAGGTMELHALNVQIFLKMHRSDYAERQLRVMQQIDEDHTLTQLANAWLNLAVG 181

Query: 675 GSKIQEAYLIFQDFSEKYQMTSLILNGKAVCCMHMGNFDEAESFLLEALNKDAKDPETLA 854
           GSKIQEAYLIFQDFSEKY MTSLILNG+AVCCMHMGNFDEAE+ LLEALNKDAKDPETLA
Sbjct: 182 GSKIQEAYLIFQDFSEKYPMTSLILNGRAVCCMHMGNFDEAETLLLEALNKDAKDPETLA 241

Query: 855 NLVVCCLHLGKPSSRFLSQLKLSHPEHMLIKRGSTAEESFDRAIQTI 995
           NLVVC LHLGKP+SRFLSQLK+SHP+HML+KR STAEE+FDRA+Q++
Sbjct: 242 NLVVCSLHLGKPTSRFLSQLKISHPDHMLVKRISTAEENFDRAVQSV 288


>ref|NP_174351.1| coatomer subunit epsilon-1 [Arabidopsis thaliana]
           gi|75336896|sp|Q9SA78.1|COPE1_ARATH RecName:
           Full=Coatomer subunit epsilon-1; AltName:
           Full=Epsilon-coat protein 1; Short=Epsilon-COP 1
           gi|4587519|gb|AAD25750.1|AC007060_8 Strong similarity to
           F19I3.7 gi|3033380 putative coatomer epsilon subunit
           from Arabidopsis thaliana BAC gb|AC004238. ESTs
           gb|Z17908, gb|AA728673, gb|N96555, gb|H76335,
           gb|AA712463, gb|W43247, gb|T45611, gb|T21160, gb|T14119
           and AI100483 come from this gene [Arabidopsis thaliana]
           gi|13194794|gb|AAK15559.1|AF348588_1 putative coatomer
           protein, epsilon subunit [Arabidopsis thaliana]
           gi|13878125|gb|AAK44140.1|AF370325_1 putative coatomer
           protein, epsilon subunit [Arabidopsis thaliana]
           gi|17104797|gb|AAL34287.1| putative coatomer protein,
           epsilon subunit [Arabidopsis thaliana]
           gi|332193133|gb|AEE31254.1| coatomer subunit epsilon-1
           [Arabidopsis thaliana]
          Length = 292

 Score =  446 bits (1146), Expect = e-123
 Identities = 213/286 (74%), Positives = 254/286 (88%)
 Frame = +3

Query: 135 AAPDLLFGLRNNFYLGAYQAAINSGDVQNLSEEDAIERDCLIYRSYIALGSYQLVVNEVD 314
           A PD LF LRN+FYLGAYQAAIN+ ++ NLS+ED +ERDCL++R+YIALGSYQLV++E+D
Sbjct: 5   AGPDHLFNLRNHFYLGAYQAAINNSEIPNLSQEDIVERDCLVHRAYIALGSYQLVISEID 64

Query: 315 SSAATPXXXXXXXXXXXXSTDNKETVISSIREWLSDAAIGNNPILRLIAGIIFMHEQDYN 494
            +AATP            S +NKE+ ISS+REWL+D  +GNN I+RLIAG IFMHE+DYN
Sbjct: 65  EAAATPLQAVKLLAMYLSSPENKESTISSLREWLADPTVGNNAIIRLIAGTIFMHEEDYN 124

Query: 495 EALKYTNVGGTMELTALNVQIFLKMHRSDYAEKQLRIMQQIDEDHTLTQLATAWLNLAVG 674
           EALK+T+ GGTM+L ALNVQIF+KMHRSD+AEKQLR+MQQIDEDHTLTQLA+AWLNLAVG
Sbjct: 125 EALKHTHSGGTMDLHALNVQIFIKMHRSDFAEKQLRVMQQIDEDHTLTQLASAWLNLAVG 184

Query: 675 GSKIQEAYLIFQDFSEKYQMTSLILNGKAVCCMHMGNFDEAESFLLEALNKDAKDPETLA 854
           GSKIQEAYLIFQDFSEKY MTSLILNGKAVCCMHMGNF+EAE+ LLEALNKDAKDPETLA
Sbjct: 185 GSKIQEAYLIFQDFSEKYPMTSLILNGKAVCCMHMGNFEEAETLLLEALNKDAKDPETLA 244

Query: 855 NLVVCCLHLGKPSSRFLSQLKLSHPEHMLIKRGSTAEESFDRAIQT 992
           NLVVC LH+GK SSR+L+QLKLSHPEH+L+KR ++AE++F+RA+Q+
Sbjct: 245 NLVVCSLHVGKSSSRYLNQLKLSHPEHVLVKRAASAEDNFERALQS 290


>gb|AAM65018.1| coatomer-like protein, epsilon subunit [Arabidopsis thaliana]
          Length = 289

 Score =  446 bits (1146), Expect = e-123
 Identities = 213/286 (74%), Positives = 254/286 (88%)
 Frame = +3

Query: 135 AAPDLLFGLRNNFYLGAYQAAINSGDVQNLSEEDAIERDCLIYRSYIALGSYQLVVNEVD 314
           A PD LF LRN+FYLGAYQAAIN+ ++ NLS+ED +ERDCL++R+YIALGSYQLV++E+D
Sbjct: 2   AGPDHLFNLRNHFYLGAYQAAINNSEIPNLSQEDIVERDCLVHRAYIALGSYQLVISEID 61

Query: 315 SSAATPXXXXXXXXXXXXSTDNKETVISSIREWLSDAAIGNNPILRLIAGIIFMHEQDYN 494
            +AATP            S +NKE+ ISS+REWL+D  +GNN I+RLIAG IFMHE+DYN
Sbjct: 62  EAAATPLQAVKLLAMYLSSPENKESTISSLREWLADPTVGNNAIIRLIAGTIFMHEEDYN 121

Query: 495 EALKYTNVGGTMELTALNVQIFLKMHRSDYAEKQLRIMQQIDEDHTLTQLATAWLNLAVG 674
           EALK+T+ GGTM+L ALNVQIF+KMHRSD+AEKQLR+MQQIDEDHTLTQLA+AWLNLAVG
Sbjct: 122 EALKHTHSGGTMDLHALNVQIFIKMHRSDFAEKQLRVMQQIDEDHTLTQLASAWLNLAVG 181

Query: 675 GSKIQEAYLIFQDFSEKYQMTSLILNGKAVCCMHMGNFDEAESFLLEALNKDAKDPETLA 854
           GSKIQEAYLIFQDFSEKY MTSLILNGKAVCCMHMGNF+EAE+ LLEALNKDAKDPETLA
Sbjct: 182 GSKIQEAYLIFQDFSEKYPMTSLILNGKAVCCMHMGNFEEAETLLLEALNKDAKDPETLA 241

Query: 855 NLVVCCLHLGKPSSRFLSQLKLSHPEHMLIKRGSTAEESFDRAIQT 992
           NLVVC LH+GK SSR+L+QLKLSHPEH+L+KR ++AE++F+RA+Q+
Sbjct: 242 NLVVCSLHVGKSSSRYLNQLKLSHPEHVLVKRAASAEDNFERALQS 287


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