BLASTX nr result

ID: Atractylodes21_contig00002979 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00002979
         (1065 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270590.1| PREDICTED: vacuolar protein sorting-associat...   297   3e-78
emb|CAN81116.1| hypothetical protein VITISV_001607 [Vitis vinifera]   292   1e-76
ref|XP_002307048.1| predicted protein [Populus trichocarpa] gi|2...   286   8e-75
ref|NP_196488.1| vacuolar protein sorting-associated protein 20-...   285   1e-74
ref|XP_002871364.1| SNF7 family protein [Arabidopsis lyrata subs...   284   2e-74

>ref|XP_002270590.1| PREDICTED: vacuolar protein sorting-associated protein 20 homolog 2
           [Vitis vinifera] gi|296081514|emb|CBI20037.3| unnamed
           protein product [Vitis vinifera]
          Length = 226

 Score =  297 bits (760), Expect = 3e-78
 Identities = 160/227 (70%), Positives = 183/227 (80%), Gaps = 6/227 (2%)
 Frame = -3

Query: 976 MGNVFVKKPKITEVDRAILSLKTQRRKLAQYQQQLEKVIEAEKQXXXXXXXXXXXXXXXX 797
           MGN+FVKKPKIT+VDRAILSLKTQRRKLAQYQQQL+ VIEAEKQ                
Sbjct: 1   MGNIFVKKPKITDVDRAILSLKTQRRKLAQYQQQLDAVIEAEKQAARDLIREKKKDRALL 60

Query: 796 XXXXXKVQEDLLKQVDAWLVNVEQQLADIELASKQKAVFESLKAGNNAMKAIQGEINLDD 617
                K QE+LLKQVDAW++NVEQQLADIELASKQKAVF+SLKAGNNA+KAIQ EINL+D
Sbjct: 61  ALKKKKAQEELLKQVDAWVINVEQQLADIELASKQKAVFDSLKAGNNAIKAIQSEINLED 120

Query: 616 VQKLMDDTAEAKAYQDEITAILGEKLSAEDEEDILAEFENLESQMTIQDLPEAPLSKPTS 437
           VQKLMDD+AEAKAYQDEI AILGEKLSAEDEE+ILAE ENLE+Q+T+QDLP  P + P  
Sbjct: 121 VQKLMDDSAEAKAYQDEINAILGEKLSAEDEEEILAELENLETQITLQDLPAVPAAVP-P 179

Query: 436 TKDEEELDLPDIPTKAPVASEIVADKSQAAD------RKVMEEPLPA 314
            ++ E+LDLPD+PTKAPVA + VAD+++ A       RKVMEEPLPA
Sbjct: 180 PEENEKLDLPDVPTKAPVAPQAVADEAEDASTGVSTRRKVMEEPLPA 226


>emb|CAN81116.1| hypothetical protein VITISV_001607 [Vitis vinifera]
          Length = 226

 Score =  292 bits (747), Expect = 1e-76
 Identities = 158/227 (69%), Positives = 181/227 (79%), Gaps = 6/227 (2%)
 Frame = -3

Query: 976 MGNVFVKKPKITEVDRAILSLKTQRRKLAQYQQQLEKVIEAEKQXXXXXXXXXXXXXXXX 797
           MGN+FVKKPKIT+VDRAILSLKTQRRKL Q QQQL+ VIEAEKQ                
Sbjct: 1   MGNIFVKKPKITDVDRAILSLKTQRRKLGQCQQQLDAVIEAEKQAARDLIREKKKDRALL 60

Query: 796 XXXXXKVQEDLLKQVDAWLVNVEQQLADIELASKQKAVFESLKAGNNAMKAIQGEINLDD 617
                K QE+LLKQVDAW++NVEQQLADIELASKQKAVF+SLKAGNNA+KAIQ EINL+D
Sbjct: 61  ALKKKKAQEELLKQVDAWVINVEQQLADIELASKQKAVFDSLKAGNNAIKAIQSEINLED 120

Query: 616 VQKLMDDTAEAKAYQDEITAILGEKLSAEDEEDILAEFENLESQMTIQDLPEAPLSKPTS 437
           VQKLMDD+AEAKAYQDEI AILGEKLSAEDEE+ILAE ENLE+Q+T+QDLP  P + P  
Sbjct: 121 VQKLMDDSAEAKAYQDEINAILGEKLSAEDEEEILAELENLETQITLQDLPAVPAAVP-P 179

Query: 436 TKDEEELDLPDIPTKAPVASEIVADKSQAAD------RKVMEEPLPA 314
            ++ E+LDLPD+PTKAPVA + VAD+++ A       RKVMEEPLPA
Sbjct: 180 PEENEKLDLPDVPTKAPVAPQAVADEAEDASTGVSTRRKVMEEPLPA 226


>ref|XP_002307048.1| predicted protein [Populus trichocarpa] gi|222856497|gb|EEE94044.1|
           predicted protein [Populus trichocarpa]
          Length = 222

 Score =  286 bits (731), Expect = 8e-75
 Identities = 155/223 (69%), Positives = 175/223 (78%), Gaps = 2/223 (0%)
 Frame = -3

Query: 976 MGNVFVKKPKITEVDRAILSLKTQRRKLAQYQQQLEKVIEAEKQXXXXXXXXXXXXXXXX 797
           MGN+FVKKPKIT+VDRAILSLKTQRRKLAQYQQQLE VIEAEKQ                
Sbjct: 1   MGNIFVKKPKITDVDRAILSLKTQRRKLAQYQQQLEAVIEAEKQAAKDLIREKRKDRALL 60

Query: 796 XXXXXKVQEDLLKQVDAWLVNVEQQLADIELASKQKAVFESLKAGNNAMKAIQGEINLDD 617
                K QE+LLKQVD WL+NVEQQLADIELASKQKAVFESLK+G +A+KAIQ E+NLDD
Sbjct: 61  ALKKKKTQEELLKQVDTWLINVEQQLADIELASKQKAVFESLKSGTDAIKAIQSEVNLDD 120

Query: 616 VQKLMDDTAEAKAYQDEITAILGEKLSAEDEEDILAEFENLESQMTIQDLPEAPLSKPTS 437
           VQKLMDDTAEAKAYQDEI AILGEKLSAEDEE+ILAEFENLE+QM +Q+ PE P +K  S
Sbjct: 121 VQKLMDDTAEAKAYQDEINAILGEKLSAEDEEEILAEFENLEAQMAVQEWPEVP-TKVLS 179

Query: 436 TKDEEELDLPDIPTKAPVASE--IVADKSQAADRKVMEEPLPA 314
            + E++LDLPD+PTK PV  +    A    +  RKV+EEPLPA
Sbjct: 180 EEQEQKLDLPDVPTKPPVLVDDAETASAEVSTRRKVLEEPLPA 222


>ref|NP_196488.1| vacuolar protein sorting-associated protein 20-2 [Arabidopsis
           thaliana] gi|75173205|sp|Q9FY89.1|VP202_ARATH RecName:
           Full=Vacuolar protein sorting-associated protein 20
           homolog 2; Short=AtVPS20-2; AltName: Full=Charged
           multivesicular body protein 6 homolog 2; AltName:
           Full=ESCRT-III complex subunit VPS20 homolog 2
           gi|9955513|emb|CAC05452.1| putative protein [Arabidopsis
           thaliana] gi|34365667|gb|AAQ65145.1| At5g09260
           [Arabidopsis thaliana] gi|51969450|dbj|BAD43417.1|
           unknown protein [Arabidopsis thaliana]
           gi|332003983|gb|AED91366.1| vacuolar protein
           sorting-associated protein 20-2 [Arabidopsis thaliana]
          Length = 216

 Score =  285 bits (729), Expect = 1e-74
 Identities = 151/221 (68%), Positives = 177/221 (80%)
 Frame = -3

Query: 976 MGNVFVKKPKITEVDRAILSLKTQRRKLAQYQQQLEKVIEAEKQXXXXXXXXXXXXXXXX 797
           MGN+FVKKPKITEVDRAILSLKTQRRKL QYQQQLEKVIEAEKQ                
Sbjct: 1   MGNLFVKKPKITEVDRAILSLKTQRRKLGQYQQQLEKVIEAEKQAARDLIREKRKDRALL 60

Query: 796 XXXXXKVQEDLLKQVDAWLVNVEQQLADIELASKQKAVFESLKAGNNAMKAIQGEINLDD 617
                + QE+LLKQVD WL+NVEQQLADIEL SKQKAVFESLK GNNA+KAIQ E+NLDD
Sbjct: 61  ALKKKRTQEELLKQVDQWLINVEQQLADIELTSKQKAVFESLKQGNNAIKAIQSEVNLDD 120

Query: 616 VQKLMDDTAEAKAYQDEITAILGEKLSAEDEEDILAEFENLESQMTIQDLPEAPLSKPTS 437
           VQKLMDDTAEAKAYQDE++AILGEKLSAEDEE+ILAEF+NLES + ++D+PE P ++   
Sbjct: 121 VQKLMDDTAEAKAYQDELSAILGEKLSAEDEEEILAEFDNLESLLIVEDMPEVPTTE-LM 179

Query: 436 TKDEEELDLPDIPTKAPVASEIVADKSQAADRKVMEEPLPA 314
            ++ E++DLPD+PTKAPVAS    +++ +  RKV+EEPL A
Sbjct: 180 PEEPEKMDLPDVPTKAPVAS----NETTSTKRKVLEEPLEA 216


>ref|XP_002871364.1| SNF7 family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297317201|gb|EFH47623.1| SNF7 family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 217

 Score =  284 bits (727), Expect = 2e-74
 Identities = 154/223 (69%), Positives = 177/223 (79%), Gaps = 2/223 (0%)
 Frame = -3

Query: 976 MGNVFVKKPKITEVDRAILSLKTQRRKLAQYQQQLEKVIEAEKQXXXXXXXXXXXXXXXX 797
           MGN+FVKKPKITEVDRAILSLKTQRRKL QYQQQLEKVIEAEKQ                
Sbjct: 1   MGNLFVKKPKITEVDRAILSLKTQRRKLGQYQQQLEKVIEAEKQAARDLIREKRKDRALL 60

Query: 796 XXXXXKVQEDLLKQVDAWLVNVEQQLADIELASKQKAVFESLKAGNNAMKAIQGEINLDD 617
                + QE+LLKQVD WL+NVEQQLADIEL SKQKAVFESLK GN+A+KAIQ E+NLDD
Sbjct: 61  ALKKKRTQEELLKQVDQWLINVEQQLADIELTSKQKAVFESLKQGNSAIKAIQSEVNLDD 120

Query: 616 VQKLMDDTAEAKAYQDEITAILGEKLSAEDEEDILAEFENLESQMTIQDLPEAPLSKPTS 437
           VQKLMDDTAEAKAYQDE++AILG+KLSAEDEEDILAEF+NLESQ+ ++D+PE P ++   
Sbjct: 121 VQKLMDDTAEAKAYQDELSAILGDKLSAEDEEDILAEFDNLESQLIVEDMPEVPTTE-LV 179

Query: 436 TKDEEELDLPDIPTKAPVAS--EIVADKSQAADRKVMEEPLPA 314
            ++ E++DLPD+PTKAPVAS  EI   K     RKV+EEPL A
Sbjct: 180 PEEPEKMDLPDVPTKAPVASNAEITPTK-----RKVLEEPLEA 217


Top