BLASTX nr result

ID: Atractylodes21_contig00002956 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00002956
         (1023 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI39533.3| unnamed protein product [Vitis vinifera]               83   1e-13
ref|XP_003556444.1| PREDICTED: F-box protein PP2-B1-like [Glycin...    67   9e-09
ref|XP_004146303.1| PREDICTED: F-box protein PP2-B10-like [Cucum...    66   1e-08
ref|XP_002876808.1| hypothetical protein ARALYDRAFT_904457 [Arab...    66   2e-08
ref|XP_002308717.1| f-box family protein [Populus trichocarpa] g...    66   2e-08

>emb|CBI39533.3| unnamed protein product [Vitis vinifera]
          Length = 694

 Score = 82.8 bits (203), Expect = 1e-13
 Identities = 86/298 (28%), Positives = 122/298 (40%), Gaps = 13/298 (4%)
 Frame = +3

Query: 165  DSDEYWEMKLPRDWRVIIHMLNIPRAIYRVKKELFSYLHKGILFDDRNKFFSINN-DGKK 341
            +SD  WE  LP D+  I+  L  P  +   KKELF  L    L D   K F ++   GK 
Sbjct: 302  ESDVVWERFLPADYHDILSRLAEPLVVSS-KKELFLRLCDPSLIDGGKKRFRLDKWSGKN 360

Query: 342  CLSISARRFL-----DARYAEWALHRDIRFSSVAKFFNGKIHDIKCQIKTSMLSLGTMYA 506
               +SAR        D  +  W    + RFS VA+       +I  +I+T MLS  T Y 
Sbjct: 361  SYMMSARELSISWSHDPTHWSWTSIPESRFSEVAELKTVCRLEIHGKIRTQMLSPNTKYG 420

Query: 507  ASLVFK-------YDWQPNEVPQRFRSITFKWKTEELNVSSINVAELSVDDWYVMKMWHF 665
            A L+ K        D  P+E+     + T      ++    +       D W  +++  F
Sbjct: 421  AYLIIKISNRAFGLDLMPSEISVEVSNST------QVCDGRVPCERRDGDGWMELELGDF 474

Query: 666  INNVPEADFDIVIEELSSFEDPYKSHILVLGIEFQPIEMMQHEEIEEFKSLSTSEEVDII 845
             N   E D ++  E L        SHIL                 +  +S   S  V   
Sbjct: 475  FNG--EGDEEMNFELL---PQDCISHILSC-----------TSPRDACRSGLVSTTVRHA 518

Query: 846  DEDHVYWEKKLPNDYQQCIEASDNPLNYTTKKELYFLLCAGFLGYSGTLWFSLCKSTG 1019
             +    WEK LP+DYQ+ +    +PL + +KKELY  LC   L   G   FS+ K+TG
Sbjct: 519  GDSDSVWEKFLPSDYQEILSRLVSPLVFASKKELYSKLCRPLLIDEGRKSFSISKTTG 576



 Score = 79.3 bits (194), Expect = 1e-12
 Identities = 86/322 (26%), Positives = 128/322 (39%), Gaps = 37/322 (11%)
 Frame = +3

Query: 165  DSDEYWEMKLPRDWRVIIHMLNIPRAIYRVKKELFSYLHKGILFDDRNKFFSINN-DGKK 341
            +SD  WE  LP D+  I+  L  P  +   +KELF  L   IL D  +K F ++   GKK
Sbjct: 41   ESDVVWERFLPADYHDILCRLVEP-LVCSSRKELFLRLCDPILIDGGSKSFRLDKWSGKK 99

Query: 342  CLSISARRFL-----DARYAEWALHRDIRFSSVAKFFNGKIHDIKCQIKTSMLSLGTMYA 506
               +SAR        D  Y  W    + RFS VA+       +I  +I+T MLS  T Y 
Sbjct: 100  SYLLSARELSITWSNDPMYWSWRSTPESRFSHVAELRTMCWLEIHGKIRTQMLSPNTKYG 159

Query: 507  ASLVFK-------YDWQPNEVPQRFRSITFKWKTEELNVSSINVAELSVDDWYVMKMWHF 665
            A L+ K        D  P+E+     + T   ++  +        E   D W  +++  F
Sbjct: 160  AYLIMKISNRAYGLDLMPSEISVEVSNSTQMLRSRVIEGDGRVPCERE-DGWMELELGDF 218

Query: 666  INNVPEADFDIVIEELSSFEDPYKSHILVLGIE---------FQPIEMMQHEEIEE---- 806
             N   + +  + + E+  +    K  +++ GIE         F  +  +    + E    
Sbjct: 219  FNGEGDEEVRMSLREVKGYH--LKGGLIIEGIEVRQRAITYCFTMVYCVGLNTLPEGCVS 276

Query: 807  -----------FKSLSTSEEVDIIDEDHVYWEKKLPNDYQQCIEASDNPLNYTTKKELYF 953
                        KS   S       E  V WE+ LP DY   +     PL  ++KKEL+ 
Sbjct: 277  TILSLTSPPDACKSSLVSSIFRAAAESDVVWERFLPADYHDILSRLAEPLVVSSKKELFL 336

Query: 954  LLCAGFLGYSGTLWFSLCKSTG 1019
             LC   L   G   F L K +G
Sbjct: 337  RLCDPSLIDGGKKRFRLDKWSG 358



 Score = 59.7 bits (143), Expect = 1e-06
 Identities = 44/127 (34%), Positives = 65/127 (51%), Gaps = 6/127 (4%)
 Frame = +3

Query: 165 DSDEYWEMKLPRDWRVIIHMLNIPRAIYRVKKELFSYLHKGILFDDRNKFFSIN-NDGKK 341
           DSD  WE  LP D++ I+  L  P  ++  KKEL+S L + +L D+  K FSI+   G+K
Sbjct: 520 DSDSVWEKFLPSDYQEILSRLVSP-LVFASKKELYSKLCRPLLIDEGRKSFSISKTTGEK 578

Query: 342 CLSISARRF-----LDARYAEWALHRDIRFSSVAKFFNGKIHDIKCQIKTSMLSLGTMYA 506
             ++SAR        +A Y  W      RF+   +       +I+ +I T MLS  T Y 
Sbjct: 579 GYTLSARNLSITWSSNALYWSWKPLLQSRFAETVELRTICWLEIQGKISTCMLSPKTTYR 638

Query: 507 ASLVFKY 527
           A L+ K+
Sbjct: 639 AYLIVKF 645


>ref|XP_003556444.1| PREDICTED: F-box protein PP2-B1-like [Glycine max]
          Length = 303

 Score = 66.6 bits (161), Expect = 9e-09
 Identities = 72/260 (27%), Positives = 106/260 (40%), Gaps = 58/260 (22%)
 Frame = +3

Query: 168 SDEYWEMKLPRDWRVIIHM---LNIPRAIYRVKKELFSYL-HKGILFDDRNKFFSINND- 332
           SD  W   LP D+  I+     L++P      KK+LF YL  K +L DD  K F ++   
Sbjct: 45  SDAVWNKFLPSDFHTILSQSSSLSLPS-----KKDLFLYLCQKPLLIDDGKKSFQLDKVY 99

Query: 333 GKKCLSISARRFL-----DARYAEWALHRDIRFSSVAKFFNGKIHDIKCQIKTSMLSLGT 497
           GKKC  +SAR          RY  W    D RFS VA+  +    +I+  I T MLS  T
Sbjct: 100 GKKCYMLSARNLFIVWGDTPRYWRWTSLPDARFSEVAELRSVCWLEIRGWINTGMLSPET 159

Query: 498 MYAASLVFK--------YDWQPNEV-----------------PQRFRSITFKWKTEELNV 602
           +Y A LVFK        +D+Q  EV                  +R R + ++        
Sbjct: 160 LYGAYLVFKPNPSGFYGFDYQLVEVSIGIAGGENRKRNVFLDAERGRRLRYQIVPRRAGT 219

Query: 603 SSINVAEL----------------------SVDDWYVMKMWHFINNVPE-ADFDIVIEEL 713
              N A                          D+W  +++  F N+  E  + ++ + E+
Sbjct: 220 GIFNRARFLAPVEAPPVEDNDSLDLQHPKERADEWLEVELGEFFNDGQEDKELEMGVYEI 279

Query: 714 SSFEDPYKSHILVLGIEFQP 773
            S +  +K  +LV GIE +P
Sbjct: 280 KSGD--WKGGLLVQGIEIRP 297


>ref|XP_004146303.1| PREDICTED: F-box protein PP2-B10-like [Cucumis sativus]
          Length = 299

 Score = 66.2 bits (160), Expect = 1e-08
 Identities = 47/137 (34%), Positives = 61/137 (44%), Gaps = 11/137 (8%)
 Frame = +3

Query: 153 VVEFDSDEYWEMKLPRDWRVIIHM-----LNIPRAIYRVKKELFSYLHKGILFDDRNKFF 317
           V    SD  W+  LP DW ++I       LN        K   FS     ++ DD NK F
Sbjct: 44  VAAAQSDIVWDSFLPTDWEILISRRKPSNLNFDPISSSKKGIFFSLCDTPLIIDDGNKSF 103

Query: 318 SINN-DGKKCLSISARRFLDA-----RYAEWALHRDIRFSSVAKFFNGKIHDIKCQIKTS 479
           S++   GKKC+ + AR           Y  W  H + RF+ VA   N    +IK ++   
Sbjct: 104 SLDKCSGKKCIMLGARELSIIWSDMPAYWTWEPHPESRFAEVAVLLNVWWLEIKGKLSCK 163

Query: 480 MLSLGTMYAASLVFKYD 530
           MLS  T YAA  VFK D
Sbjct: 164 MLSPATTYAAYFVFKMD 180


>ref|XP_002876808.1| hypothetical protein ARALYDRAFT_904457 [Arabidopsis lyrata subsp.
           lyrata] gi|297322646|gb|EFH53067.1| hypothetical protein
           ARALYDRAFT_904457 [Arabidopsis lyrata subsp. lyrata]
          Length = 317

 Score = 65.9 bits (159), Expect = 2e-08
 Identities = 63/239 (26%), Positives = 106/239 (44%), Gaps = 28/239 (11%)
 Frame = +3

Query: 168 SDEYWEMKLPRDWRVIIHMLNIPRAIYRVKKEL-FSYLHKGILFDDRNKFFSINN-DGKK 341
           SD  WE  LP D+  ++    +    +  KK+L FS  H+ +L +D  K F +    GK+
Sbjct: 61  SDTVWEKFLPPDYSSLVPQSRV----FLSKKDLYFSLCHEPLLIEDGKKSFWLEKTSGKR 116

Query: 342 CLSISARRFL-----DARYAEWALHRDIRFSSVAKFFNGKIHDIKCQIKTSMLSLGTMYA 506
           C+ +S +          +Y  W    + RF  V K  N    +++ ++ T  LS GT Y+
Sbjct: 117 CIMLSPKEMWITWVSSPQYWRWISISEARFEEVPKLLNVCWFEVRGRMSTRYLSPGTHYS 176

Query: 507 ASLVFKYDWQ----------------PNEVPQRFRSITFKWKTEEL---NVSSINVAELS 629
             +VFK   Q                  E+ QRF  I F    ++     +S +   E  
Sbjct: 177 VYIVFKPKDQCPGLGDLPIKVKVGLVGQELFQRF--IRFVGPMDQRCGREMSDVTRPEER 234

Query: 630 VDDWYVMKMWHFINNVPEADF-DIVIEELSSFEDPY-KSHILVLGIEFQPIEMMQHEEI 800
            D W   ++  F N +   D  ++ + E+ S   PY KS +++ GIEF+P +   +E++
Sbjct: 235 EDGWMEAELGEFFNEISCDDHVEVSVVEIKS---PYWKSGLIIQGIEFRPTKTPVNEKM 290


>ref|XP_002308717.1| f-box family protein [Populus trichocarpa]
           gi|222854693|gb|EEE92240.1| f-box family protein
           [Populus trichocarpa]
          Length = 292

 Score = 65.9 bits (159), Expect = 2e-08
 Identities = 53/144 (36%), Positives = 70/144 (48%), Gaps = 16/144 (11%)
 Frame = +3

Query: 165 DSDEYWEMKLPRDWRVIIHMLN--IPRAIYRVKKELFSYL-HKGILFDDRNKFFS-INND 332
           +SD  WE  LPRD++ II   +  +  +    KKEL+  L  K I+ DD  K FS +   
Sbjct: 38  ESDAVWERFLPRDYQSIIFTSDSYVLLSSLSSKKELYLRLCEKPIIIDDGKKSFSLVKKS 97

Query: 333 GKKCLSISARRFL-----DARYAEWALHRDIRFSSVAKFFNGKIHDIKCQIKTSMLSLGT 497
           GKKC  +SAR  +        Y  W      RF  VA+       +I  +I  +MLS  T
Sbjct: 98  GKKCYMLSARDLMIVWGDTPTYWRWNSDSSSRFGEVAELIGVCWLEICGKINATMLSPAT 157

Query: 498 MYAASLVFK-------YDWQPNEV 548
           +YAA LVFK        D+QP EV
Sbjct: 158 LYAAYLVFKPKEGAYGLDYQPVEV 181


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