BLASTX nr result

ID: Atractylodes21_contig00002929 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00002929
         (595 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002305746.1| predicted protein [Populus trichocarpa] gi|1...   126   3e-27
ref|XP_004140771.1| PREDICTED: 60S ribosomal protein L36-2-like ...   125   7e-27
emb|CBI40362.3| unnamed protein product [Vitis vinifera]              123   2e-26
ref|XP_002317423.1| predicted protein [Populus trichocarpa] gi|2...   123   2e-26
ref|XP_002322479.1| predicted protein [Populus trichocarpa] gi|1...   123   2e-26

>ref|XP_002305746.1| predicted protein [Populus trichocarpa] gi|118484529|gb|ABK94139.1|
           unknown [Populus trichocarpa]
           gi|118487398|gb|ABK95527.1| unknown [Populus
           trichocarpa] gi|222848710|gb|EEE86257.1| predicted
           protein [Populus trichocarpa]
          Length = 110

 Score =  126 bits (316), Expect = 3e-27
 Identities = 70/110 (63%), Positives = 72/110 (65%), Gaps = 12/110 (10%)
 Frame = -3

Query: 521 MAPKQPNTGLFVGLNKGHVVTKKELAPRPSDRKGKTSK------------XXXXXXXXXX 378
           MAPKQPNTGLFVGLNKGH+VTKKELAPRPSDRKGKTSK                      
Sbjct: 1   MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKTSKRVLFVRSLIREVAGFAPYEKRI 60

Query: 377 XXXXXXXXXXXXXXXAKRKLGTHKRAKKKREEMSNVLRKMRSGGGAEKKK 228
                          AKRKLGTHKRAKKKREEMSNVLRKMR+ GGAEKKK
Sbjct: 61  TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNVLRKMRAAGGAEKKK 110


>ref|XP_004140771.1| PREDICTED: 60S ribosomal protein L36-2-like [Cucumis sativus]
           gi|449469345|ref|XP_004152381.1| PREDICTED: 60S
           ribosomal protein L36-2-like [Cucumis sativus]
           gi|449518411|ref|XP_004166235.1| PREDICTED: 60S
           ribosomal protein L36-2-like [Cucumis sativus]
           gi|449528180|ref|XP_004171084.1| PREDICTED: 60S
           ribosomal protein L36-2-like [Cucumis sativus]
           gi|307136494|gb|ADN34294.1| 60S ribosomal protein l36e
           [Cucumis melo subsp. melo]
          Length = 110

 Score =  125 bits (313), Expect = 7e-27
 Identities = 69/110 (62%), Positives = 73/110 (66%), Gaps = 12/110 (10%)
 Frame = -3

Query: 521 MAPKQPNTGLFVGLNKGHVVTKKELAPRPSDRKGKTSK------------XXXXXXXXXX 378
           MAPKQPNTGLFVGLNKGH+VTKKELAPRPSDRKGK+SK                      
Sbjct: 1   MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKSSKRVLFVRSLIREVAGFAPYEKRI 60

Query: 377 XXXXXXXXXXXXXXXAKRKLGTHKRAKKKREEMSNVLRKMRSGGGAEKKK 228
                          AKRKLGTHKRAKKKREEMS+VLRKMR+GGGAEKKK
Sbjct: 61  TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRAGGGAEKKK 110


>emb|CBI40362.3| unnamed protein product [Vitis vinifera]
          Length = 145

 Score =  123 bits (309), Expect = 2e-26
 Identities = 70/112 (62%), Positives = 72/112 (64%), Gaps = 12/112 (10%)
 Frame = -3

Query: 527 EVMAPKQPNTGLFVGLNKGHVVTKKELAPRPSDRKGKTSK------------XXXXXXXX 384
           +VMAPKQPNTGLFVGLNKGHVVTKKEL PRPSDRKGKTSK                    
Sbjct: 34  QVMAPKQPNTGLFVGLNKGHVVTKKELPPRPSDRKGKTSKRVHFVRNIIREVAGFAPYEK 93

Query: 383 XXXXXXXXXXXXXXXXXAKRKLGTHKRAKKKREEMSNVLRKMRSGGGAEKKK 228
                            AKRKLGTHKRAKKKREEMS+VLRKMRSGG  EKKK
Sbjct: 94  RITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSSVLRKMRSGGVGEKKK 145


>ref|XP_002317423.1| predicted protein [Populus trichocarpa] gi|222860488|gb|EEE98035.1|
           predicted protein [Populus trichocarpa]
          Length = 110

 Score =  123 bits (309), Expect = 2e-26
 Identities = 68/110 (61%), Positives = 71/110 (64%), Gaps = 12/110 (10%)
 Frame = -3

Query: 521 MAPKQPNTGLFVGLNKGHVVTKKELAPRPSDRKGKTSK------------XXXXXXXXXX 378
           MAPKQPNTGLFVGLNKGH+VTKKELAPRPSDRKGKTSK                      
Sbjct: 1   MAPKQPNTGLFVGLNKGHIVTKKELAPRPSDRKGKTSKRVQFVRSLIREVAGFAPYEKRI 60

Query: 377 XXXXXXXXXXXXXXXAKRKLGTHKRAKKKREEMSNVLRKMRSGGGAEKKK 228
                          AKRKLGTHKRAK+KREEMSNVLRKMR+ GG EKKK
Sbjct: 61  TELLKVGKDKRALKVAKRKLGTHKRAKRKREEMSNVLRKMRAAGGGEKKK 110


>ref|XP_002322479.1| predicted protein [Populus trichocarpa] gi|118482219|gb|ABK93038.1|
           unknown [Populus trichocarpa]
           gi|118484900|gb|ABK94316.1| unknown [Populus
           trichocarpa] gi|222869475|gb|EEF06606.1| predicted
           protein [Populus trichocarpa]
          Length = 110

 Score =  123 bits (309), Expect = 2e-26
 Identities = 69/110 (62%), Positives = 71/110 (64%), Gaps = 12/110 (10%)
 Frame = -3

Query: 521 MAPKQPNTGLFVGLNKGHVVTKKELAPRPSDRKGKTSK------------XXXXXXXXXX 378
           MAPKQPNTGLFVGLNKGHVVTKK+LAPRPSDRKGK+SK                      
Sbjct: 1   MAPKQPNTGLFVGLNKGHVVTKKDLAPRPSDRKGKSSKRVLFVRSLIREVAGFAPYEKRI 60

Query: 377 XXXXXXXXXXXXXXXAKRKLGTHKRAKKKREEMSNVLRKMRSGGGAEKKK 228
                          AKRKLGTHKRAKKKREEMSNVLRKMRS GG EKKK
Sbjct: 61  TELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNVLRKMRSAGGGEKKK 110


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