BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00002919
         (666 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAD34613.1|AF153277_1 DNA-directed RNA polymerase IIa [Nicoti...   116   1e-40
ref|XP_002510834.1| DNA-directed RNA polymerase subunit rpb6, pu...   109   5e-39
ref|XP_002318240.1| predicted protein [Populus trichocarpa] gi|2...   105   6e-38
ref|XP_002279544.1| PREDICTED: DNA-directed RNA polymerases I, I...   104   1e-37
ref|XP_002322450.1| predicted protein [Populus trichocarpa] gi|2...   103   2e-37

>gb|AAD34613.1|AF153277_1 DNA-directed RNA polymerase IIa [Nicotiana tabacum]
           gi|4960152|gb|AAD34614.1|AF153278_1 DNA-directed RNA
           polymerase IIb [Nicotiana tabacum]
          Length = 143

 Score =  116 bits (291), Expect(2) = 1e-40
 Identities = 56/64 (87%), Positives = 60/64 (93%)
 Frame = +1

Query: 184 EDVPDPLLGDNEDKEEQEAVEKPRKTIKYMTKYERARILGTRALQISMNAPVMVELEGET 363
           ED+PDPLLG+ E+K EQE VE+PRKT KYMTKYERARILGTRALQISMNAPVMVELEGET
Sbjct: 35  EDIPDPLLGEGEEKTEQEPVERPRKTSKYMTKYERARILGTRALQISMNAPVMVELEGET 94

Query: 364 DPLE 375
           DPLE
Sbjct: 95  DPLE 98



 Score = 75.9 bits (185), Expect(2) = 1e-40
 Identities = 33/33 (100%), Positives = 33/33 (100%)
 Frame = +3

Query: 468 PFTIRRYLPDGSYEDWGVDELIVEDSWKRQVGG 566
           PFTIRRYLPDGSYEDWGVDELIVEDSWKRQVGG
Sbjct: 110 PFTIRRYLPDGSYEDWGVDELIVEDSWKRQVGG 142


>ref|XP_002510834.1| DNA-directed RNA polymerase subunit rpb6, putative [Ricinus
           communis] gi|223549949|gb|EEF51436.1| DNA-directed RNA
           polymerase subunit rpb6, putative [Ricinus communis]
          Length = 124

 Score =  109 bits (272), Expect(2) = 5e-39
 Identities = 57/68 (83%), Positives = 60/68 (88%), Gaps = 1/68 (1%)
 Frame = +1

Query: 175 NKEEDVP-DPLLGDNEDKEEQEAVEKPRKTIKYMTKYERARILGTRALQISMNAPVMVEL 351
           N  EDVP DP+  + EDKEEQEA E+PRKT KYMTKYERARILGTRALQISMNAPVMVEL
Sbjct: 14  NNNEDVPGDPI--ETEDKEEQEAAERPRKTSKYMTKYERARILGTRALQISMNAPVMVEL 71

Query: 352 EGETDPLE 375
           EGETDPLE
Sbjct: 72  EGETDPLE 79



 Score = 78.2 bits (191), Expect(2) = 5e-39
 Identities = 34/34 (100%), Positives = 34/34 (100%)
 Frame = +3

Query: 468 PFTIRRYLPDGSYEDWGVDELIVEDSWKRQVGGD 569
           PFTIRRYLPDGSYEDWGVDELIVEDSWKRQVGGD
Sbjct: 91  PFTIRRYLPDGSYEDWGVDELIVEDSWKRQVGGD 124


>ref|XP_002318240.1| predicted protein [Populus trichocarpa] gi|222858913|gb|EEE96460.1|
           predicted protein [Populus trichocarpa]
          Length = 143

 Score =  105 bits (262), Expect(2) = 6e-38
 Identities = 53/67 (79%), Positives = 59/67 (88%)
 Frame = +1

Query: 175 NKEEDVPDPLLGDNEDKEEQEAVEKPRKTIKYMTKYERARILGTRALQISMNAPVMVELE 354
           N E+D  +P+  + EDKEEQE VE+PRKT K+MTKYERARILGTRALQISMNAPVMVELE
Sbjct: 34  NNEDDKGEPI--ETEDKEEQEPVERPRKTSKFMTKYERARILGTRALQISMNAPVMVELE 91

Query: 355 GETDPLE 375
           GETDPLE
Sbjct: 92  GETDPLE 98



 Score = 78.2 bits (191), Expect(2) = 6e-38
 Identities = 34/34 (100%), Positives = 34/34 (100%)
 Frame = +3

Query: 468 PFTIRRYLPDGSYEDWGVDELIVEDSWKRQVGGD 569
           PFTIRRYLPDGSYEDWGVDELIVEDSWKRQVGGD
Sbjct: 110 PFTIRRYLPDGSYEDWGVDELIVEDSWKRQVGGD 143


>ref|XP_002279544.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
           RPABC2 isoform 1 [Vitis vinifera]
           gi|297741100|emb|CBI31831.3| unnamed protein product
           [Vitis vinifera]
          Length = 142

 Score =  104 bits (259), Expect(2) = 1e-37
 Identities = 53/67 (79%), Positives = 57/67 (85%)
 Frame = +1

Query: 175 NKEEDVPDPLLGDNEDKEEQEAVEKPRKTIKYMTKYERARILGTRALQISMNAPVMVELE 354
           N  EDVPD L  + ++KE  E VE+PRKT KYMTKYERARILGTRALQISMNAPVMVELE
Sbjct: 33  NNNEDVPDAL--EEQEKEVHETVERPRKTSKYMTKYERARILGTRALQISMNAPVMVELE 90

Query: 355 GETDPLE 375
           GETDPLE
Sbjct: 91  GETDPLE 97



 Score = 78.2 bits (191), Expect(2) = 1e-37
 Identities = 34/34 (100%), Positives = 34/34 (100%)
 Frame = +3

Query: 468 PFTIRRYLPDGSYEDWGVDELIVEDSWKRQVGGD 569
           PFTIRRYLPDGSYEDWGVDELIVEDSWKRQVGGD
Sbjct: 109 PFTIRRYLPDGSYEDWGVDELIVEDSWKRQVGGD 142


>ref|XP_002322450.1| predicted protein [Populus trichocarpa] gi|222869446|gb|EEF06577.1|
           predicted protein [Populus trichocarpa]
          Length = 143

 Score =  103 bits (258), Expect(2) = 2e-37
 Identities = 52/67 (77%), Positives = 58/67 (86%)
 Frame = +1

Query: 175 NKEEDVPDPLLGDNEDKEEQEAVEKPRKTIKYMTKYERARILGTRALQISMNAPVMVELE 354
           N E+D  +P+  + EDKEEQ  VE+PRKT K+MTKYERARILGTRALQISMNAPVMVELE
Sbjct: 34  NNEDDTGEPI--ETEDKEEQAPVERPRKTSKFMTKYERARILGTRALQISMNAPVMVELE 91

Query: 355 GETDPLE 375
           GETDPLE
Sbjct: 92  GETDPLE 98



 Score = 78.2 bits (191), Expect(2) = 2e-37
 Identities = 34/34 (100%), Positives = 34/34 (100%)
 Frame = +3

Query: 468 PFTIRRYLPDGSYEDWGVDELIVEDSWKRQVGGD 569
           PFTIRRYLPDGSYEDWGVDELIVEDSWKRQVGGD
Sbjct: 110 PFTIRRYLPDGSYEDWGVDELIVEDSWKRQVGGD 143