BLASTX nr result

ID: Atractylodes21_contig00002889 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00002889
         (622 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004140911.1| PREDICTED: 40S ribosomal protein S17-4-like ...    73   5e-11
ref|XP_004136500.1| PREDICTED: 40S ribosomal protein S17-like [C...    73   5e-11
gb|ABA46777.1| 40S ribosomal protein S17-like protein [Solanum t...    73   5e-11
gb|AAM65414.1| 40S ribosomal protein S17-like [Arabidopsis thali...    73   5e-11
ref|NP_196100.1| 40S ribosomal protein S17-4 [Arabidopsis thalia...    73   5e-11

>ref|XP_004140911.1| PREDICTED: 40S ribosomal protein S17-4-like isoform 1 [Cucumis
           sativus] gi|449446305|ref|XP_004140912.1| PREDICTED: 40S
           ribosomal protein S17-4-like isoform 2 [Cucumis sativus]
           gi|449494136|ref|XP_004159460.1| PREDICTED: 40S
           ribosomal protein S17-4-like isoform 1 [Cucumis sativus]
           gi|449494139|ref|XP_004159461.1| PREDICTED: 40S
           ribosomal protein S17-4-like isoform 2 [Cucumis sativus]
          Length = 141

 Score = 72.8 bits (177), Expect = 5e-11
 Identities = 38/44 (86%), Positives = 38/44 (86%)
 Frame = -2

Query: 621 IIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQXXXXXXRMD 490
           IIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQ      RMD
Sbjct: 40  IIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMD 83


>ref|XP_004136500.1| PREDICTED: 40S ribosomal protein S17-like [Cucumis sativus]
           gi|449515869|ref|XP_004164970.1| PREDICTED: 40S
           ribosomal protein S17-like [Cucumis sativus]
          Length = 139

 Score = 72.8 bits (177), Expect = 5e-11
 Identities = 38/44 (86%), Positives = 38/44 (86%)
 Frame = -2

Query: 621 IIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQXXXXXXRMD 490
           IIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQ      RMD
Sbjct: 40  IIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMD 83


>gb|ABA46777.1| 40S ribosomal protein S17-like protein [Solanum tuberosum]
          Length = 144

 Score = 72.8 bits (177), Expect = 5e-11
 Identities = 38/44 (86%), Positives = 38/44 (86%)
 Frame = -2

Query: 621 IIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQXXXXXXRMD 490
           IIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQ      RMD
Sbjct: 40  IIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMD 83


>gb|AAM65414.1| 40S ribosomal protein S17-like [Arabidopsis thaliana]
          Length = 141

 Score = 72.8 bits (177), Expect = 5e-11
 Identities = 38/44 (86%), Positives = 38/44 (86%)
 Frame = -2

Query: 621 IIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQXXXXXXRMD 490
           IIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQ      RMD
Sbjct: 40  IIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMD 83


>ref|NP_196100.1| 40S ribosomal protein S17-4 [Arabidopsis thaliana]
           gi|30680641|ref|NP_850765.1| 40S ribosomal protein S17-4
           [Arabidopsis thaliana] gi|79326979|ref|NP_001031834.1|
           40S ribosomal protein S17-4 [Arabidopsis thaliana]
           gi|79326995|ref|NP_001031835.1| 40S ribosomal protein
           S17-4 [Arabidopsis thaliana]
           gi|20139799|sp|Q9LZ17.3|RS174_ARATH RecName: Full=40S
           ribosomal protein S17-4
           gi|13605724|gb|AAK32855.1|AF361843_1 AT5g04800/MUK11_12
           [Arabidopsis thaliana] gi|7413542|emb|CAB86022.1| 40S
           ribosomal protein S17-like [Arabidopsis thaliana]
           gi|9758455|dbj|BAB08984.1| 40S ribosomal protein S17
           [Arabidopsis thaliana] gi|23507769|gb|AAN38688.1|
           At5g04800/MUK11_12 [Arabidopsis thaliana]
           gi|222423844|dbj|BAH19887.1| AT5G04800 [Arabidopsis
           thaliana] gi|332003402|gb|AED90785.1| 40S ribosomal
           protein S17-4 [Arabidopsis thaliana]
           gi|332003403|gb|AED90786.1| 40S ribosomal protein S17-4
           [Arabidopsis thaliana] gi|332003404|gb|AED90787.1| 40S
           ribosomal protein S17-4 [Arabidopsis thaliana]
           gi|332003405|gb|AED90788.1| 40S ribosomal protein S17-4
           [Arabidopsis thaliana]
          Length = 141

 Score = 72.8 bits (177), Expect = 5e-11
 Identities = 38/44 (86%), Positives = 38/44 (86%)
 Frame = -2

Query: 621 IIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQXXXXXXRMD 490
           IIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQ      RMD
Sbjct: 40  IIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMD 83


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