BLASTX nr result

ID: Atractylodes21_contig00002872 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00002872
         (1201 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267356.1| PREDICTED: cyclin-D4-1 [Vitis vinifera] gi|2...   320   4e-85
gb|ADN33810.1| cyclin d protein [Cucumis melo subsp. melo]            305   1e-80
emb|CAN66965.1| hypothetical protein VITISV_043227 [Vitis vinifera]   303   6e-80
ref|XP_004150260.1| PREDICTED: cyclin-D1-1-like [Cucumis sativus...   298   2e-78
ref|XP_002298781.1| predicted protein [Populus trichocarpa] gi|2...   293   8e-77

>ref|XP_002267356.1| PREDICTED: cyclin-D4-1 [Vitis vinifera] gi|296083031|emb|CBI22435.3|
            unnamed protein product [Vitis vinifera]
          Length = 354

 Score =  320 bits (820), Expect = 4e-85
 Identities = 177/316 (56%), Positives = 210/316 (66%), Gaps = 10/316 (3%)
 Frame = +2

Query: 158  MSDHFASSLVXXXXXXXXXXXXXXLIAAEPHHSPLPDYLLRCQRRSVHLTHRQDSINWIL 337
            +SD  +S LV                 +EP H P+ DYL RC+ RSV +T RQDSINWIL
Sbjct: 35   ISDPGSSPLVYAHSPPFDESTIERFFGSEPDHRPMEDYLCRCRDRSVDVTSRQDSINWIL 94

Query: 338  NAHAHYHFQPITAILSVNYLDRFLSSAAAFLPGNNGWAFQLLSVACLSLAAKMEEPEVPL 517
              HA+YHF+P+TAILSVNYLDRFLS  A  LP  NGW FQLLSVACLSLAAKMEE  VPL
Sbjct: 95   KVHAYYHFRPVTAILSVNYLDRFLSRHA--LPQGNGWPFQLLSVACLSLAAKMEETHVPL 152

Query: 518  LLDLQVSEPRLVFEPQTVQRMELWVMANLNWRLRSVTPFDFLHYFIFKLPPS--YRTDEL 691
            LLDLQ+ + + VFEP+T+QRMELWVMANLNWRLRSVTPFDF+ YF  KLP S   R D L
Sbjct: 153  LLDLQMFQTKFVFEPKTIQRMELWVMANLNWRLRSVTPFDFIDYFASKLPCSSASRHDLL 212

Query: 692  -YIHSKCSDLIINTIRVIDFLRFRPXXXXXXXXXXXXGEGVD-------VPDCYYEKVNK 847
              + S  +DLI+NT RV+DFL F P            G+ VD        P+ +YE+V++
Sbjct: 213  TRVFSVSADLILNTTRVVDFLGFSPSVIAAAAVISASGKRVDFPAGGDWTPESFYERVDR 272

Query: 848  EMVRSCHQLMEEYLVDTCPSGDHKVRKQWRSEQAPSSPDGVLDAATCVSCDTRSDNPLFI 1027
            E+VRSCHQLMEEYL+DTCPS   K  +      AP+SP GVLDAA C SC+TRS+NP  +
Sbjct: 273  EVVRSCHQLMEEYLIDTCPSAPLKDLRP--EPPAPASPVGVLDAAACGSCETRSENP-GL 329

Query: 1028 PTPSSGDQDSQNKRPR 1075
               +       NKRPR
Sbjct: 330  SEANPPQPPPPNKRPR 345


>gb|ADN33810.1| cyclin d protein [Cucumis melo subsp. melo]
          Length = 347

 Score =  305 bits (781), Expect = 1e-80
 Identities = 168/301 (55%), Positives = 202/301 (67%), Gaps = 12/301 (3%)
 Frame = +2

Query: 230  LIAAEPHHSPLPDYLLRCQRRSVHLTHRQDSINWILNAHAHYHFQPITAILSVNYLDRFL 409
            L+ +E HH P  DYL RC+  S+ +T RQDSINWIL  H+HY+F+P+TAILSVNY DRFL
Sbjct: 48   LLQSELHHMPRIDYLRRCRDHSIDVTARQDSINWILKVHSHYNFKPVTAILSVNYFDRFL 107

Query: 410  SSAAAFLPGNNGWAFQLLSVACLSLAAKMEEPEVPLLLDLQVSEPRLVFEPQTVQRMELW 589
            SS    LP  NGWAFQLLSVACLSLAAKMEEPEVPLLLDLQ+ EP+ VFEP+TVQRMELW
Sbjct: 108  SSN--ILPRRNGWAFQLLSVACLSLAAKMEEPEVPLLLDLQIFEPKYVFEPKTVQRMELW 165

Query: 590  VMANLNWRLRSVTPFDFLHYFIFKLPPSYRT---------DELYIHSKCSDLIINTIRVI 742
            VM+ LNWRLR+VTPFDFLH+FI  LP S            D   + S  SDLI++T RVI
Sbjct: 166  VMSILNWRLRAVTPFDFLHHFISDLPTSSSAAESGRGDSDDSHRLFSSSSDLILSTTRVI 225

Query: 743  DFLRFRPXXXXXXXXXXXXGEGVDVP--DCYYEKVNK-EMVRSCHQLMEEYLVDTCPSGD 913
            DFL F P            GE +D P    ++   N+ E V+SCHQLMEEY++DTC +  
Sbjct: 226  DFLEFPPSTIAAAAVLCAAGERLDSPVVCTHFLAANRIENVKSCHQLMEEYVIDTCTAEL 285

Query: 914  HKVRKQWRSEQAPSSPDGVLDAATCVSCDTRSDNPLFIPTPSSGDQDSQNKRPRSNVQEE 1093
             K R+    + AP SP GVLDAA C SCDTR D+P    +     + S +KR RS+  + 
Sbjct: 286  RKQRRIGEEQPAPPSPVGVLDAAACGSCDTRLDHP-GSTSHEPPAEPSPSKRIRSSAPDV 344

Query: 1094 Q 1096
            Q
Sbjct: 345  Q 345


>emb|CAN66965.1| hypothetical protein VITISV_043227 [Vitis vinifera]
          Length = 334

 Score =  303 bits (776), Expect = 6e-80
 Identities = 171/309 (55%), Positives = 200/309 (64%), Gaps = 3/309 (0%)
 Frame = +2

Query: 158  MSDHFASSLVXXXXXXXXXXXXXXLIAAEPHHSPLPDYLLRCQRRSVHLTHRQDSINWIL 337
            +SD  +S LV                 +EP H P+ DYL RC+ RSV +T RQDSINWIL
Sbjct: 35   ISDPGSSPLVYAHSPPFDESTIERFFGSEPDHRPMEDYLCRCRDRSVDVTSRQDSINWIL 94

Query: 338  NAHAHYHFQPITAILSVNYLDRFLSSAAAFLPGNNGWAFQLLSVACLSLAAKMEEPEVPL 517
              HA+YHF+P+TAILSVNYLDRFLS  A  LP  NGW FQLLSVACLSLAAKMEE  VPL
Sbjct: 95   KVHAYYHFRPVTAILSVNYLDRFLSRHA--LPQGNGWPFQLLSVACLSLAAKMEETHVPL 152

Query: 518  LLDLQVSEPRLVFEPQTVQRMELWVMANLNWRLRSVTPFDFLHYFIFKLPPS--YRTDEL 691
            LLDLQ+ + + VFEP+T+QRMELWVMANLNWRLRSVTPFDF+ YF  KLP S   R D L
Sbjct: 153  LLDLQMFQTKFVFEPKTIQRMELWVMANLNWRLRSVTPFDFIDYFASKLPCSSASRHDLL 212

Query: 692  -YIHSKCSDLIINTIRVIDFLRFRPXXXXXXXXXXXXGEGVDVPDCYYEKVNKEMVRSCH 868
              + S  +DLI+NT RV+DFL F P            G+             +E+VRSCH
Sbjct: 213  TRVFSVSADLILNTTRVVDFLGFSPSVIAAAAVISASGK-------------REVVRSCH 259

Query: 869  QLMEEYLVDTCPSGDHKVRKQWRSEQAPSSPDGVLDAATCVSCDTRSDNPLFIPTPSSGD 1048
            QLMEEYL+DTCPS   K  +      AP+SP GVLDAA C SC+TRS+NP  +   +   
Sbjct: 260  QLMEEYLIDTCPSAPLKDLRP--EPPAPASPVGVLDAAACGSCETRSENP-GLSEANPPQ 316

Query: 1049 QDSQNKRPR 1075
                NKRPR
Sbjct: 317  PPPPNKRPR 325


>ref|XP_004150260.1| PREDICTED: cyclin-D1-1-like [Cucumis sativus]
            gi|449521665|ref|XP_004167850.1| PREDICTED:
            cyclin-D1-1-like [Cucumis sativus]
          Length = 330

 Score =  298 bits (763), Expect = 2e-78
 Identities = 165/301 (54%), Positives = 197/301 (65%), Gaps = 12/301 (3%)
 Frame = +2

Query: 230  LIAAEPHHSPLPDYLLRCQRRSVHLTHRQDSINWILNAHAHYHFQPITAILSVNYLDRFL 409
            L+ ++ HH P  DYL RC+  S+ LT RQDSINWIL  H+HY+F+P+TAILSVNY DRFL
Sbjct: 40   LLQSQLHHMPRLDYLRRCRDHSIDLTARQDSINWILMVHSHYNFKPVTAILSVNYFDRFL 99

Query: 410  SSAAAFLPGNNGWAFQLLSVACLSLAAKMEEPEVPLLLDLQVSEPRLVFEPQTVQRMELW 589
            SS    LP  NGWAFQLLSVACLSLAAKMEEPEVPLLLDLQ+ EP+ VFEP+TVQRMELW
Sbjct: 100  SSN--ILPRRNGWAFQLLSVACLSLAAKMEEPEVPLLLDLQIFEPKYVFEPKTVQRMELW 157

Query: 590  VMANLNWRLRSVTPFDFLHYFIFKLPPSYRT---------DELYIHSKCSDLIINTIRVI 742
            VM+ LNWRLR+VTPFDFLH+FI  LP S            D   + S  SDLI++TIRVI
Sbjct: 158  VMSILNWRLRAVTPFDFLHHFISDLPSSSSAADGGRGDGDDSDRLFSSSSDLILSTIRVI 217

Query: 743  DFLRFRPXXXXXXXXXXXXGEGVDVPD--CYYEKVNK-EMVRSCHQLMEEYLVDTCPSGD 913
            DFL F P            GE ++ P    ++   N+ E V+SC QLMEEY++DTC +  
Sbjct: 218  DFLEFPPSTIAAAAVLCAAGERLNSPAGCSHFLAANRIENVKSCQQLMEEYVIDTCTAEL 277

Query: 914  HKVRKQWRSEQAPSSPDGVLDAATCVSCDTRSDNPLFIPTPSSGDQDSQNKRPRSNVQEE 1093
             K R+    E AP SP GVLDAA C SCD           P S   +  +KR RS+  + 
Sbjct: 278  RKQRRIGEEEPAPPSPVGVLDAAACASCD----------NPGSTSHEPPSKRIRSSAPDV 327

Query: 1094 Q 1096
            Q
Sbjct: 328  Q 328


>ref|XP_002298781.1| predicted protein [Populus trichocarpa] gi|222846039|gb|EEE83586.1|
            predicted protein [Populus trichocarpa]
          Length = 400

 Score =  293 bits (749), Expect = 8e-77
 Identities = 161/278 (57%), Positives = 193/278 (69%), Gaps = 14/278 (5%)
 Frame = +2

Query: 230  LIAAEPHHSPLPDYLLRCQRRSVHLTHRQDSINWILNAHAHYHFQPITAILSVNYLDRFL 409
            LI +E H  PL DYL RC+ RS+ +T RQDSINWIL  +AHY F+P+TA+LSVNY DRFL
Sbjct: 104  LIDSESHFMPLSDYLHRCRHRSIDITARQDSINWILKVYAHYEFRPLTALLSVNYFDRFL 163

Query: 410  SSAAAFLPGNNGWAFQLLSVACLSLAAKMEEPEVPLLLDLQVSEPRLVFEPQTVQRMELW 589
            SS +  LP  NGW FQLLSVACLSLAAKMEEP+VPLLLDLQ+ EP  +FEP+ +Q+MEL 
Sbjct: 164  SSYS--LP-ENGWPFQLLSVACLSLAAKMEEPDVPLLLDLQILEPGFIFEPKNIQKMELR 220

Query: 590  VMANLNWRLRSVTPFDFLHYFIFKLPPSYRTDEL---YIHSKCSDLIINTIRVIDFLRFR 760
            VMANLNWRLRS TPFD+L YFI KLP    T       +  K +DLI+NT RVIDFL F 
Sbjct: 221  VMANLNWRLRSTTPFDYLDYFISKLPSCSSTKPENFDRVLKKSADLILNTTRVIDFLGFA 280

Query: 761  PXXXXXXXXXXXXGEGVD-------VPDCYYEKVNKEMVRSCHQLMEEYLVDTCPSGDHK 919
            P            G+  D       V   ++E+VN+EMVRSCHQL+EEYL+DTCP+    
Sbjct: 281  PSTVAAAAVISAAGKNFDTIPLKAGVGQFFHERVNREMVRSCHQLIEEYLIDTCPT---- 336

Query: 920  VRKQWRSEQA---PSSPDGVLD-AATCVSCDTRSDNPL 1021
             R +  S+ A   P+SP GVLD AA C SC TRS+NP+
Sbjct: 337  ARLKDLSDDALVDPASPAGVLDAAAACGSCSTRSENPI 374


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