BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00002863
         (2878 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284657.1| PREDICTED: DNA-directed RNA polymerase III s...   739   0.0  
ref|XP_003539102.1| PREDICTED: DNA-directed RNA polymerase III s...   702   0.0  
ref|XP_004148776.1| PREDICTED: DNA-directed RNA polymerase III s...   702   0.0  
ref|XP_002300065.1| predicted protein [Populus trichocarpa] gi|2...   696   0.0  
ref|XP_002531828.1| DNA-directed RNA polymerase III largest subu...   693   0.0  

>ref|XP_002284657.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Vitis
            vinifera]
          Length = 1383

 Score =  739 bits (1909), Expect(2) = 0.0
 Identities = 366/450 (81%), Positives = 395/450 (87%)
 Frame = +2

Query: 2    YINSDVRVPPQFVQNAKPLSGLVQRMKGKQGRFRGNLSGKRVEYTGRTVISPDPNLKITE 181
            YINSDVR  P  +Q A+PLSG VQR+KGKQGRFRGNLSGKRVEYTGRTVISPDPNLKITE
Sbjct: 319  YINSDVRGVPLAMQAARPLSGFVQRLKGKQGRFRGNLSGKRVEYTGRTVISPDPNLKITE 378

Query: 182  VAIPILMARILTYPERVSQHNIERLRHAVRNGTSKYPGAKHIRKPDGTMMSLSINARKRL 361
            VAIPILMA+IL+YPERVS HNIE+LR  + NG  KYPGAK IR PDG+M SL  + RKR 
Sbjct: 379  VAIPILMAKILSYPERVSHHNIEKLRQCILNGPFKYPGAKLIRYPDGSMRSLMFSGRKRF 438

Query: 362  ADELKFGDIVDRHLIDGDVVLFNTQPSLHRMSIMSHRARIMPWRTLRFNESVCNPYNADF 541
            ADELK+G IV+RHL DGDVVLFN QPSLHRMSIM HRARIMPWRTLRFNESVCNPYNADF
Sbjct: 439  ADELKYGYIVERHLEDGDVVLFNRQPSLHRMSIMCHRARIMPWRTLRFNESVCNPYNADF 498

Query: 542  DGDEMNMHVPQTEEARTEALTLMGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDTFYD 721
            DGDEMNMHVPQTEEARTEAL LMGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDTFYD
Sbjct: 499  DGDEMNMHVPQTEEARTEALMLMGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDTFYD 558

Query: 722  RASFALMCCYMGDAMDPLDLPTPAIVKPIELWTGKQLFSVLLRPHADMRVYLNLTVTEKS 901
            RA+F+LMC YMGD MD +DLPTPAI+KP+ELWTGKQLF+VLLRPHA++RVYLNLTV EK+
Sbjct: 559  RAAFSLMCSYMGDGMDLVDLPTPAIIKPVELWTGKQLFNVLLRPHANVRVYLNLTVMEKT 618

Query: 902  YTKPSGKRDKPYETMCPNDGYVYVHNSELLSGQLGKATLGNGNKDGLYSVLLRDYNSHAA 1081
            Y K  GK     ETMCP+DG+VY  NSEL+SGQLGKATLGNGNKDGL+SVLLRDYN+HAA
Sbjct: 619  YNKRRGK-----ETMCPSDGFVYFRNSELISGQLGKATLGNGNKDGLFSVLLRDYNAHAA 673

Query: 1082 AACMNRLAKLSARWIGNHGFSIGIDDVQPGDNLNDNTSRIISEGNRKCDNFILDFNKGKL 1261
            AACMNRLAKLSARWIGNHGFSIGIDDVQPG  LND  S+ I EG   C   I  +NKGKL
Sbjct: 674  AACMNRLAKLSARWIGNHGFSIGIDDVQPGGLLNDQKSKRIEEGYENCHELIQQYNKGKL 733

Query: 1262 KLQPGCNAAQTLEAEITGVLNKIRDETGKI 1351
            KLQPGCNAAQTLEAEITGVLNKIR+ T  +
Sbjct: 734  KLQPGCNAAQTLEAEITGVLNKIRETTANV 763



 Score =  616 bits (1588), Expect(2) = 0.0
 Identities = 319/477 (66%), Positives = 383/477 (80%)
 Frame = +3

Query: 1434 VCMEKLHWRNSPLIMSQCGSKGSPINISQMIACVGQQSVGGQRAPNGFVDRSLPHFPRKS 1613
            VCME+LHWRNSPLIMSQCGSKGSPINISQMIACVGQQSVGG+RAP+GF+DR+LPHFPRKS
Sbjct: 763  VCMEELHWRNSPLIMSQCGSKGSPINISQMIACVGQQSVGGRRAPDGFIDRTLPHFPRKS 822

Query: 1614 KTPAAKGFVANSFYSGLTATEFFFHTMGGREGLVDTAVKTADTGYMSRKLIKGLEDLSVY 1793
            KTP AKGFVA+SFY+GLTATEFFFHTMGGREGLVDTAVKTADTGYMSR+L+K LEDLS+ 
Sbjct: 823  KTPDAKGFVASSFYTGLTATEFFFHTMGGREGLVDTAVKTADTGYMSRRLMKALEDLSIQ 882

Query: 1794 YDNTVRDSSACIVQFTYGGDGRDPSQMEGKAGFPLNFDRLLMKAKXXXXXXXXXXXXXXX 1973
            YD TVR+++  IVQF YG DG DP++MEGK GFPLNF+RL +K K               
Sbjct: 883  YDETVRNANGSIVQFLYGDDGMDPARMEGKDGFPLNFNRLFLKVK--------------- 927

Query: 1974 XXKATCPAGKHRGMSSSEILQVVDERLSMHDMTPEGGCSEDFRKKLKEFLEKYAATLEST 2153
               ATCPAG++  +S+ +I + V +RL  H+ + EG CS+ F+  L  FLE+     ++T
Sbjct: 928  ---ATCPAGENASLSALQIEETV-KRLKEHNTSAEG-CSDAFKTNLSGFLEECKEKFKNT 982

Query: 2154 KRALQPHDVQIQDEESTIVEDVAQSISGITSQQLQVFLNTCIFRYHQKKIDAGTNIGAIG 2333
            + AL  H   + +E   I E  A++ISGITS+QLQVFL+TCI RY  K+I+AGT IGAIG
Sbjct: 983  REALGLHGEHVGEENLDIQEKFAKNISGITSKQLQVFLDTCISRYQLKRIEAGTAIGAIG 1042

Query: 2334 AQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEILNAAKKISTPVITAKLKSNNNLSF 2513
            A SIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEI+N AK+ISTP+ITA L+ NNN+  
Sbjct: 1043 AHSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINGAKRISTPIITAALECNNNVKT 1102

Query: 2514 AKLVKGQMERTLLGQVAKSIKLVLGLRSASIVVSLDKETIQALQLSVDAYTVKESILKTP 2693
            A++VKG++ERT LGQVAKSIK+VL  R A I V+LD E IQA QLS+D+  V+ESIL+  
Sbjct: 1103 ARMVKGRIERTTLGQVAKSIKIVLTSRLALIAVALDMEGIQASQLSIDSNIVRESILRNR 1162

Query: 2694 KIKLKEQHIKVLDARKLEVNPPSDKNKLYFDLHWLRNRLPTVVVKGIGTVERAVINK 2864
            +IKLK+QHIKVLDA KLEV+P  D++ ++F+LH L+N LPTVVVKGI TVERAVINK
Sbjct: 1163 RIKLKQQHIKVLDAGKLEVHPQGDRSTIHFELHALKNLLPTVVVKGIETVERAVINK 1219


>ref|XP_003539102.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Glycine
            max]
          Length = 1391

 Score =  702 bits (1812), Expect(2) = 0.0
 Identities = 342/457 (74%), Positives = 390/457 (85%), Gaps = 2/457 (0%)
 Frame = +2

Query: 2    YINSDVRVPPQFVQNAKPLSGLVQRMKGKQGRFRGNLSGKRVEYTGRTVISPDPNLKITE 181
            +INSDVR  P ++Q  K L+G VQR+KGK GRFRGNLSGKRVEYTGRTVISPDPNLKI+E
Sbjct: 318  FINSDVRGIPFYMQPTKQLAGFVQRLKGKHGRFRGNLSGKRVEYTGRTVISPDPNLKISE 377

Query: 182  VAIPILMARILTYPERVSQHNIERLRHAVRNGTSKYPGAKHIRKPDGTMMSLSINARKRL 361
            VAIPI MARILTYPERV+ HNIE+LR  VRNG  KYPGA+ +R+  G   SL +  RKR 
Sbjct: 378  VAIPIHMARILTYPERVTHHNIEKLRQCVRNGPDKYPGARMLRRDGGHSWSLKVLCRKRA 437

Query: 362  ADELKFGDIVDRHLIDGDVVLFNTQPSLHRMSIMSHRARIMPWRTLRFNESVCNPYNADF 541
            ADEL+ GDIVDRHL DGD+VLFN QPSLHRMSIM HRARIMPWRTLRFNESVCNPYNADF
Sbjct: 438  ADELRIGDIVDRHLEDGDIVLFNRQPSLHRMSIMCHRARIMPWRTLRFNESVCNPYNADF 497

Query: 542  DGDEMNMHVPQTEEARTEALTLMGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDTFYD 721
            DGDEMN+HVPQTEEARTEA+ LMGV+NNLCTPKNGEILVASTQDFLTSSFLITRKDTFYD
Sbjct: 498  DGDEMNLHVPQTEEARTEAILLMGVENNLCTPKNGEILVASTQDFLTSSFLITRKDTFYD 557

Query: 722  RASFALMCCYMGDAMDPLDLPTPAIVKPIELWTGKQLFSVLLRPHADMRVYLNLTVTEKS 901
            R++F+L+C Y+GD MDP+DLPTPAIVKP+ELW+GKQLFS++LRPHA+MRVY+NLTV E++
Sbjct: 558  RSTFSLICSYIGDGMDPIDLPTPAIVKPVELWSGKQLFSIILRPHANMRVYVNLTVKERN 617

Query: 902  YTKPSGKRDKPYE--TMCPNDGYVYVHNSELLSGQLGKATLGNGNKDGLYSVLLRDYNSH 1075
            YT+    +DK  E  T+CPNDG+VY  NSEL+SGQ+GK TLGNGNKDGL+SVLLRDY +H
Sbjct: 618  YTEDKKIKDKKIEWKTLCPNDGFVYFRNSELISGQVGKVTLGNGNKDGLFSVLLRDYRAH 677

Query: 1076 AAAACMNRLAKLSARWIGNHGFSIGIDDVQPGDNLNDNTSRIISEGNRKCDNFILDFNKG 1255
            AAA+CMNRLAKLSARWIGNHGFSIGIDDVQP + L +     ISEG R+CD  I  FNKG
Sbjct: 678  AAASCMNRLAKLSARWIGNHGFSIGIDDVQPKEILINKKDETISEGYRECDKHIEAFNKG 737

Query: 1256 KLKLQPGCNAAQTLEAEITGVLNKIRDETGKIYYLTM 1366
            KL+L  GC+AAQTLE  ITGVLN +RD  GK+   T+
Sbjct: 738  KLELLAGCDAAQTLETRITGVLNGLRDTAGKVCMQTL 774



 Score =  562 bits (1449), Expect(2) = 0.0
 Identities = 299/487 (61%), Positives = 365/487 (74%), Gaps = 9/487 (1%)
 Frame = +3

Query: 1431 QVCMEKLHWRNSPLIMSQCGSKGSPINISQMIACVGQQSVGGQRAPNGFVDRSLPHFPRK 1610
            +VCM+ LHWRNSPLIMSQCGSKGS INISQM+ACVGQQSVGG+R PNGF+DRSLPHFPRK
Sbjct: 768  KVCMQTLHWRNSPLIMSQCGSKGSSINISQMVACVGQQSVGGRRTPNGFIDRSLPHFPRK 827

Query: 1611 SKTPAAKGFVANSFYSGLTATEFFFHTMGGREGLVDTAVKTADTGYMSRKLIKGLEDLSV 1790
            SKTPAAKGFVANSFYSGL+ATEFFFHTMGGREGLVDTAVKTADTGYMSR+L+K LEDL +
Sbjct: 828  SKTPAAKGFVANSFYSGLSATEFFFHTMGGREGLVDTAVKTADTGYMSRQLMKSLEDLFL 887

Query: 1791 YYDNTVRDSSACIVQFTYGGDGRDPSQMEGKAGFPLNFDRLLMKAKXXXXXXXXXXXXXX 1970
            +YD TVR++   IVQF YG DG DP+ MEGK G PLNF+RL +K+               
Sbjct: 888  HYDYTVRNAGGSIVQFCYGDDGMDPAGMEGKNGKPLNFERLFLKS--------------- 932

Query: 1971 XXXKATCPAGK-HRGMSSSEILQVVDERLSMHDMTP-------EGGCSEDFRKKLKEFLE 2126
               KA CP  +    +SSS++ +VV E+LS  DM+        E G S DF + L+ F++
Sbjct: 933  ---KAICPNDEDDEILSSSDVSKVVHEKLSEFDMSRLAEKGVFEVGFSADFVESLQSFIK 989

Query: 2127 KYAATLESTKRALQPHDVQIQDEESTIVEDVAQSISGITSQQLQVFLNTCIFRYHQKKID 2306
              A   E              DE S  ++   Q ISGIT +QL VFLN C+ RYH KK++
Sbjct: 990  DNAKLTEE----------GFTDEHSQNLKKFGQRISGITRKQLDVFLNICLSRYHSKKME 1039

Query: 2307 AGTNIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEILNAAKKISTPVITAK 2486
            AG  +GA GA SIGEPGTQMTLKTFHFAGVASMNVTLGVPR+KEI+N  KKISTP+ITA 
Sbjct: 1040 AGAPVGATGAHSIGEPGTQMTLKTFHFAGVASMNVTLGVPRVKEIMNGNKKISTPIITAI 1099

Query: 2487 LKSNNNLSFAKLVKGQMERTLLGQVAKSIKLVLGLRSASIVVSLDKETIQALQLSVDAYT 2666
            L+ ++N + A++VKG++E+T LGQVAKSIK+V+  RSAS+V++LD + IQ   L++DA  
Sbjct: 1100 LERDDNANTARIVKGRIEKTNLGQVAKSIKVVMTSRSASVVITLDMKRIQDAHLNIDANI 1159

Query: 2667 VKESILKTPKIKLKEQHIKVLDARKLEVNPPS-DKNKLYFDLHWLRNRLPTVVVKGIGTV 2843
            VKESIL+T K KLK +HIK+LD +KLEV P   D++K++F LH+L+N LPTVVVKGI TV
Sbjct: 1160 VKESILRTKKTKLKPEHIKILDIKKLEVVPQDVDRSKIHFQLHYLKNLLPTVVVKGIKTV 1219

Query: 2844 ERAVINK 2864
            +R VI+K
Sbjct: 1220 DRVVISK 1226


>ref|XP_004148776.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc1-like [Cucumis
            sativus]
          Length = 1400

 Score =  702 bits (1811), Expect(2) = 0.0
 Identities = 347/449 (77%), Positives = 385/449 (85%)
 Frame = +2

Query: 5    INSDVRVPPQFVQNAKPLSGLVQRMKGKQGRFRGNLSGKRVEYTGRTVISPDPNLKITEV 184
            INSDVR  P  +Q +KPL+G VQR+KGKQGRFRGNL GKRVE+TGRTVISPDPNLKITEV
Sbjct: 316  INSDVRGIPFSMQVSKPLAGFVQRLKGKQGRFRGNLCGKRVEFTGRTVISPDPNLKITEV 375

Query: 185  AIPILMARILTYPERVSQHNIERLRHAVRNGTSKYPGAKHIRKPDGTMMSLSINARKRLA 364
            A+PI MARILTYPERV++HNIE+LR  V NG  KYPGA+ +R  DG+M SL I+ RKRLA
Sbjct: 376  AVPIHMARILTYPERVTRHNIEKLRQCVSNGPDKYPGARMLRHLDGSMRSLMISGRKRLA 435

Query: 365  DELKFGDIVDRHLIDGDVVLFNTQPSLHRMSIMSHRARIMPWRTLRFNESVCNPYNADFD 544
            DELK+G+IV+RHL DGDVVLFN QPSLHRMSIM HR R+MPWRTLRFNESVCNPYNADFD
Sbjct: 436  DELKYGEIVERHLEDGDVVLFNRQPSLHRMSIMCHRVRVMPWRTLRFNESVCNPYNADFD 495

Query: 545  GDEMNMHVPQTEEARTEALTLMGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDTFYDR 724
            GDEMNMHVPQTEEARTEA+ LMGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDTFYDR
Sbjct: 496  GDEMNMHVPQTEEARTEAILLMGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDTFYDR 555

Query: 725  ASFALMCCYMGDAMDPLDLPTPAIVKPIELWTGKQLFSVLLRPHADMRVYLNLTVTEKSY 904
            A+F+LMC YMGD MD +DLPTPA+VKPIELWTGKQLFSVL+RPHA M+VYLNLTV EKSY
Sbjct: 556  AAFSLMCSYMGDGMDLVDLPTPALVKPIELWTGKQLFSVLVRPHASMKVYLNLTVKEKSY 615

Query: 905  TKPSGKRDKPYETMCPNDGYVYVHNSELLSGQLGKATLGNGNKDGLYSVLLRDYNSHAAA 1084
            +K  G  +K  ETMCPNDG+VY  NSEL+SGQ+GKATLGNGNKDGLYSVLLRDY +HAAA
Sbjct: 616  SKVKG-NEKERETMCPNDGFVYFRNSELISGQVGKATLGNGNKDGLYSVLLRDYKAHAAA 674

Query: 1085 ACMNRLAKLSARWIGNHGFSIGIDDVQPGDNLNDNTSRIISEGNRKCDNFILDFNKGKLK 1264
             CMNRLAKLSARWIGNHGFSIGIDDVQPGD L       I EG R CD  I  FN G L 
Sbjct: 675  VCMNRLAKLSARWIGNHGFSIGIDDVQPGDQLVKKKQTTILEGYRDCDKQINLFNTGNLP 734

Query: 1265 LQPGCNAAQTLEAEITGVLNKIRDETGKI 1351
             + GC+AAQ+LE++IT +LN IR+ T  +
Sbjct: 735  PEAGCDAAQSLESKITQILNGIREATANV 763



 Score =  598 bits (1543), Expect(2) = 0.0
 Identities = 307/491 (62%), Positives = 381/491 (77%), Gaps = 10/491 (2%)
 Frame = +3

Query: 1434 VCMEKLHWRNSPLIMSQCGSKGSPINISQMIACVGQQSVGGQRAPNGFVDRSLPHFPRKS 1613
            VCM+ LHWRNSPLIMSQCGSKGSPINISQM+ACVGQQSVGG+RAP+GF+DRSLPHF RK+
Sbjct: 763  VCMQNLHWRNSPLIMSQCGSKGSPINISQMVACVGQQSVGGRRAPDGFIDRSLPHFRRKA 822

Query: 1614 KTPAAKGFVANSFYSGLTATEFFFHTMGGREGLVDTAVKTADTGYMSRKLIKGLEDLSVY 1793
            KTPAAKGFVANSFYSGLTATEFFFHTMGGREGLVDTAVKTADTGYMSR+LIK LEDLS++
Sbjct: 823  KTPAAKGFVANSFYSGLTATEFFFHTMGGREGLVDTAVKTADTGYMSRRLIKALEDLSIH 882

Query: 1794 YDNTVRDSSACIVQFTYGGDGRDPSQMEGKAGFPLNFDRLLMKAKXXXXXXXXXXXXXXX 1973
            YD++VR++  CIVQF YG DG DP+QMEGK+G PLNF+RL +KA                
Sbjct: 883  YDSSVRNAGGCIVQFCYGDDGMDPAQMEGKSGAPLNFERLFLKA---------------- 926

Query: 1974 XXKATCPAGKHRGMSSSEILQVVDERLSMHDMTPEGGCSEDFRKKLKEFLEKY------- 2132
              KATCP+  ++ +S SE  + V++RLS  D +PE GCS  F   LK FL KY       
Sbjct: 927  --KATCPSDGNKILSPSEFSETVEDRLSKDDASPECGCSPAFVGSLKIFLNKYVEAQKKS 984

Query: 2133 -AATLESTKRALQPHDVQIQDEESTIVED-VAQSISGITSQQLQVFLNTCIFRYHQKKID 2306
                L   + A+    +   D ++ ++ + V Q+I+G+T +QLQVFL+TC+ RYH KKI+
Sbjct: 985  WGTLLADNESAVDKSIISSSDNDNIVIRNKVVQNIAGVTHRQLQVFLDTCLSRYHTKKIE 1044

Query: 2307 AGTNIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEILNAAKKISTPVITAK 2486
            AGT IGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEI+N AK+ISTP++TA 
Sbjct: 1045 AGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEIINGAKRISTPIVTAA 1104

Query: 2487 LKSNNNLSFAKLVKGQMERTLLGQVAKSIKLVLGLRSASIVVSLDKETIQALQLSVDAYT 2666
            L  ++N++ A++VK ++E+T LGQ+AK I++V+  RSA I + LD E I+  +L VDA  
Sbjct: 1105 LTHDDNVNIARMVKARIEKTNLGQIAKCIQIVMSSRSALIEIKLDMEKIRDAELYVDANV 1164

Query: 2667 VKESILKTPKIKLKEQHIKVLDARKLEVNP-PSDKNKLYFDLHWLRNRLPTVVVKGIGTV 2843
            VK++IL TPK+KLK +HI VLD RKL V P  +D+NKL+F+LH+L+N LP VVVKGI TV
Sbjct: 1165 VKQAILVTPKLKLKHEHINVLDDRKLRVLPQDADRNKLHFNLHFLKNMLPGVVVKGIKTV 1224

Query: 2844 ERAVINKKKEQ 2876
             RAVI ++K++
Sbjct: 1225 GRAVIKEEKDK 1235


>ref|XP_002300065.1| predicted protein [Populus trichocarpa] gi|222847323|gb|EEE84870.1|
            predicted protein [Populus trichocarpa]
          Length = 1394

 Score =  696 bits (1797), Expect(2) = 0.0
 Identities = 341/450 (75%), Positives = 384/450 (85%)
 Frame = +2

Query: 2    YINSDVRVPPQFVQNAKPLSGLVQRMKGKQGRFRGNLSGKRVEYTGRTVISPDPNLKITE 181
            YINSDVR+P   +Q  +PLSG VQR+ GKQGRFR NL+GKRVE+TGRTVISPDPNLKITE
Sbjct: 322  YINSDVRIPLD-MQVGRPLSGFVQRLTGKQGRFRQNLAGKRVEFTGRTVISPDPNLKITE 380

Query: 182  VAIPILMARILTYPERVSQHNIERLRHAVRNGTSKYPGAKHIRKPDGTMMSLSINARKRL 361
            VAIPI MARILTYPERV+ HNIE+LR  V NG+ KYPGA+ +  PDG+   L+ N RKR+
Sbjct: 381  VAIPIHMARILTYPERVTHHNIEKLRQCVNNGSYKYPGARMVTYPDGSSKMLTGNYRKRI 440

Query: 362  ADELKFGDIVDRHLIDGDVVLFNTQPSLHRMSIMSHRARIMPWRTLRFNESVCNPYNADF 541
            A+ELK G IV RHL DGDVVLFN QPSLHRMSIM HRARIMPWRTLRFNESVCNPYNADF
Sbjct: 441  AEELKSGCIVHRHLEDGDVVLFNRQPSLHRMSIMCHRARIMPWRTLRFNESVCNPYNADF 500

Query: 542  DGDEMNMHVPQTEEARTEALTLMGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDTFYD 721
            DGDEMNMHVPQTEEARTEA  LMGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDTFYD
Sbjct: 501  DGDEMNMHVPQTEEARTEAFLLMGVQNNLCTPKNGEILVASTQDFLTSSFLITRKDTFYD 560

Query: 722  RASFALMCCYMGDAMDPLDLPTPAIVKPIELWTGKQLFSVLLRPHADMRVYLNLTVTEKS 901
            RA+F+LMC YM D MD +DLPTP+++KPIELWTGKQLFSVLLRPHA++RVY+NL + EK+
Sbjct: 561  RAAFSLMCSYMNDGMDLVDLPTPSVLKPIELWTGKQLFSVLLRPHANVRVYVNLILKEKN 620

Query: 902  YTKPSGKRDKPYETMCPNDGYVYVHNSELLSGQLGKATLGNGNKDGLYSVLLRDYNSHAA 1081
            Y++P+ +  K  ETMCPNDGYVY  NSEL+SGQLGKATLGNGNKDGLYS+LLRDYN++AA
Sbjct: 621  YSRPNKEHKKERETMCPNDGYVYFRNSELISGQLGKATLGNGNKDGLYSILLRDYNAYAA 680

Query: 1082 AACMNRLAKLSARWIGNHGFSIGIDDVQPGDNLNDNTSRIISEGNRKCDNFILDFNKGKL 1261
            A CMNRLAKLSARWIGNHGFSIGIDDVQPG  L D   + IS G R C+  I D+N G+L
Sbjct: 681  ATCMNRLAKLSARWIGNHGFSIGIDDVQPGKKLIDEKGKTISNGYRHCNKLIADYNGGRL 740

Query: 1262 KLQPGCNAAQTLEAEITGVLNKIRDETGKI 1351
             L+ GC+A QTLE EIT  LNK+R+E G +
Sbjct: 741  ALKSGCDATQTLETEITERLNKLREEAGDV 770



 Score =  590 bits (1520), Expect(2) = 0.0
 Identities = 312/488 (63%), Positives = 373/488 (76%), Gaps = 9/488 (1%)
 Frame = +3

Query: 1434 VCMEKLHWRNSPLIMSQCGSKGSPINISQMIACVGQQSVGGQRAPNGFVDRSLPHFPRKS 1613
            VCM++LHWRNSPLIMSQCGSKGSPINISQMIACVGQQSVGG RAP+GF+DRSLPHFPRKS
Sbjct: 770  VCMKELHWRNSPLIMSQCGSKGSPINISQMIACVGQQSVGGSRAPDGFIDRSLPHFPRKS 829

Query: 1614 KTPAAKGFVANSFYSGLTATEFFFHTMGGREGLVDTAVKTADTGYMSRKLIKGLEDLSVY 1793
            KTPAAKGFVANSFYSGL+ATEFFFHTMGGREGLVDTAVKTADTGYM+R+L KGLEDL V 
Sbjct: 830  KTPAAKGFVANSFYSGLSATEFFFHTMGGREGLVDTAVKTADTGYMARRLSKGLEDLCVQ 889

Query: 1794 YDNTVRDSSACIVQFTYGGDGRDPSQMEGKAGFPLNFDRLLMKAKXXXXXXXXXXXXXXX 1973
            YDNTV+D+   IVQF YG DG DP+ MEGKAG PLNFDRL MK                 
Sbjct: 890  YDNTVQDAGGGIVQFLYGDDGLDPAIMEGKAGVPLNFDRLFMKV---------------- 933

Query: 1974 XXKATCPAGKHRGMSSSEILQVVDERLSMHDMTPEGGCSEDFRKKLKEFLEKYAATLEST 2153
              KATC A +   +S S+I  +V   L  H+ T +G CSE FRK L  FL   A  LE  
Sbjct: 934  --KATCGAEEDEYLSPSDISNIVQSLLLKHNGTLDGICSESFRKSLSSFLGDQAKRLECL 991

Query: 2154 KRALQPHDVQ----IQDEE-----STIVEDVAQSISGITSQQLQVFLNTCIFRYHQKKID 2306
             + +   +V+    I++ E     S   E +AQ +SGIT +QL+VFL TC+ RY  K+I+
Sbjct: 992  MKLVDGVEVENFENIKNVEGLTGISKNTEKIAQKVSGITEKQLEVFLKTCLDRYVWKRIE 1051

Query: 2307 AGTNIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEILNAAKKISTPVITAK 2486
             GT IGAIGAQSIGEPGTQMTLKTFHFAGVASMN+T GVPRIKEI+N AK+ISTP+IT +
Sbjct: 1052 PGTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNITQGVPRIKEIINGAKRISTPIITVE 1111

Query: 2487 LKSNNNLSFAKLVKGQMERTLLGQVAKSIKLVLGLRSASIVVSLDKETIQALQLSVDAYT 2666
            L+ N+N++ A+++KG++++T+LGQVAKSIK+V+  RSAS+ V+LD +TI+  QLS+DA  
Sbjct: 1112 LEHNSNVNAARIIKGRIQKTVLGQVAKSIKIVMTSRSASVKVTLDMKTIREAQLSLDANI 1171

Query: 2667 VKESILKTPKIKLKEQHIKVLDARKLEVNPPSDKNKLYFDLHWLRNRLPTVVVKGIGTVE 2846
            V+E IL+TPKIK K Q I VL+  KLEV P  D+NKL+F+LH L+N LP VVVKGI TVE
Sbjct: 1172 VRELILETPKIKRKLQRINVLEDGKLEVFPGGDRNKLHFELHSLKNMLPAVVVKGIKTVE 1231

Query: 2847 RAVINKKK 2870
            R VI +KK
Sbjct: 1232 RVVIAQKK 1239


>ref|XP_002531828.1| DNA-directed RNA polymerase III largest subunit, putative [Ricinus
            communis] gi|223528524|gb|EEF30548.1| DNA-directed RNA
            polymerase III largest subunit, putative [Ricinus
            communis]
          Length = 1383

 Score =  693 bits (1789), Expect(2) = 0.0
 Identities = 347/453 (76%), Positives = 384/453 (84%), Gaps = 3/453 (0%)
 Frame = +2

Query: 2    YINSDVRVPPQFVQNAKPLSGLVQRMKGKQGRFRGNLSGKRVEYTGRTVISPDPNLKITE 181
            Y+NSDVRVP   V+  KPLSG VQR+KGKQGRFRGNLSGKRVE+TGRTVISPDPNLKITE
Sbjct: 293  YMNSDVRVPNN-VEVGKPLSGFVQRLKGKQGRFRGNLSGKRVEFTGRTVISPDPNLKITE 351

Query: 182  VAIPILMARILTYPERVSQHNIERLRHAVRNGTSKYPGAKHIRKPDGTMMSLSINARKRL 361
            VAIPI MARIL+YPERVS HNIE+LR  V NG  KYPGA  +R PDG+   L  + RK +
Sbjct: 352  VAIPIHMARILSYPERVSHHNIEKLRQLVSNGPQKYPGASTVRYPDGSSKRLIGSYRKTI 411

Query: 362  ADELKFGDIVDRHLIDGDVVLFNTQPSLHRMSIMSHRARIMPWRTLRFNESVCNPYNADF 541
            A+EL FG IVDRHL DGDVVLFN QPSLHRMSIM HRARIMPWRTLRFNESVCNPYNADF
Sbjct: 412  AEELTFGCIVDRHLEDGDVVLFNRQPSLHRMSIMCHRARIMPWRTLRFNESVCNPYNADF 471

Query: 542  DGDEMNMHVPQTEEARTEALTLMGV-QNNLCTPKNGEILVASTQDFLTSSFLITRKDTFY 718
            DGDEMNMHVPQTEEARTEAL LMGV QNNLCTPKNGEILVASTQDFLTSSFLITR+DTFY
Sbjct: 472  DGDEMNMHVPQTEEARTEALLLMGVSQNNLCTPKNGEILVASTQDFLTSSFLITRRDTFY 531

Query: 719  DRASFALMCCYMGDAMDPLDLPTPAIVKPIELWTGKQLFSVLLRPHADMRVYLNLTVTEK 898
            DRA+F+LMC YM D MD +DLPTPAI+KPIELWTGKQLFSVLLRP+A++RVY+NL V EK
Sbjct: 532  DRAAFSLMCSYMNDGMDLIDLPTPAILKPIELWTGKQLFSVLLRPNANVRVYVNLIVREK 591

Query: 899  SYTKPSGKRDKPYETMCPNDGYVYVHNSELLSGQLGKATLGNGNKDGLYSVLLRDYNSHA 1078
             Y+KP     +  ETMCPNDG+VY+ NSEL+SGQLGKATLGNGNKDGLYS+LLRDYN HA
Sbjct: 592  IYSKPKKGDKREKETMCPNDGFVYIRNSELISGQLGKATLGNGNKDGLYSILLRDYNPHA 651

Query: 1079 AAACMNRLAKLS--ARWIGNHGFSIGIDDVQPGDNLNDNTSRIISEGNRKCDNFILDFNK 1252
            AA CMNRLAKL   ARWIGNHGFSIGIDDVQPG  L D   + IS G ++CD  I  +N+
Sbjct: 652  AATCMNRLAKLRQVARWIGNHGFSIGIDDVQPGKKLIDGKGKTISNGYQQCDKLIEQYNE 711

Query: 1253 GKLKLQPGCNAAQTLEAEITGVLNKIRDETGKI 1351
            GKL L+PGC+A QTLE+EIT  LNK+R+E G +
Sbjct: 712  GKLLLKPGCDATQTLESEITEKLNKLREEAGDV 744



 Score =  599 bits (1544), Expect(2) = 0.0
 Identities = 310/487 (63%), Positives = 374/487 (76%), Gaps = 8/487 (1%)
 Frame = +3

Query: 1434 VCMEKLHWRNSPLIMSQCGSKGSPINISQMIACVGQQSVGGQRAPNGFVDRSLPHFPRKS 1613
            VCM++LHWRNSPLIMSQCGSKGS INISQM+ACVGQQSVGG+RAP+GF+DRSLPHFPRKS
Sbjct: 744  VCMKELHWRNSPLIMSQCGSKGSVINISQMVACVGQQSVGGRRAPDGFIDRSLPHFPRKS 803

Query: 1614 KTPAAKGFVANSFYSGLTATEFFFHTMGGREGLVDTAVKTADTGYMSRKLIKGLEDLSVY 1793
            KTPAAKGFVANSFYSGL ATEFFFHTM GREGLVDTAVKTADTGYMSR+LIKGLEDLS+ 
Sbjct: 804  KTPAAKGFVANSFYSGLMATEFFFHTMAGREGLVDTAVKTADTGYMSRRLIKGLEDLSIQ 863

Query: 1794 YDNTVRDSSACIVQFTYGGDGRDPSQMEGKAGFPLNFDRLLMKAKXXXXXXXXXXXXXXX 1973
            YDNTVR++S CIVQF YG DG DP+ MEGK G PLN DRL  K                 
Sbjct: 864  YDNTVRNASGCIVQFLYGDDGLDPASMEGKGGVPLNLDRLFSKV---------------- 907

Query: 1974 XXKATCPAGKHRGMSSSEILQVVDERLSMHDMTPEGGCSEDFRKKLKEFLEKYAATLEST 2153
              KATCP  +   +S  +I  VV+  L  HDM   G CSE F+K L  FL  +A  LES 
Sbjct: 908  --KATCPVREEDYLSPLDISDVVENLLLKHDMALGGICSEAFKKSLTSFLGSHAKRLESM 965

Query: 2154 KRAL----QPHDVQIQD----EESTIVEDVAQSISGITSQQLQVFLNTCIFRYHQKKIDA 2309
             +       P    IQ       S I+E +A  I G++ +Q++VF+ TCI RY  K+++ 
Sbjct: 966  MKLADGVEDPTSENIQTGGIRGNSKIIERLAHKIFGVSERQIEVFVKTCINRYLWKRVEP 1025

Query: 2310 GTNIGAIGAQSIGEPGTQMTLKTFHFAGVASMNVTLGVPRIKEILNAAKKISTPVITAKL 2489
            GT IGAIGAQSIGEPGTQMTLKTFHFAGVASMN+T GVPRIKEI+N AKKISTP+ITA+L
Sbjct: 1026 GTAIGAIGAQSIGEPGTQMTLKTFHFAGVASMNITQGVPRIKEIINGAKKISTPIITAEL 1085

Query: 2490 KSNNNLSFAKLVKGQMERTLLGQVAKSIKLVLGLRSASIVVSLDKETIQALQLSVDAYTV 2669
            + N N++ A++ KG++++T+LGQVAKSIK+V+  RSAS+V++LD +TIQ  QLS+DA  V
Sbjct: 1086 EQNTNVTAARIAKGRIQKTVLGQVAKSIKIVMTSRSASVVITLDMKTIQNAQLSLDANIV 1145

Query: 2670 KESILKTPKIKLKEQHIKVLDARKLEVNPPSDKNKLYFDLHWLRNRLPTVVVKGIGTVER 2849
            KE+IL+TP+IKLK QHIKVLD RKLEV P  D+ +++F+LH L+N LP+++V+GI TVER
Sbjct: 1146 KEAILRTPRIKLKPQHIKVLDTRKLEVIPLGDRERVHFELHNLKNLLPSIIVQGIKTVER 1205

Query: 2850 AVINKKK 2870
            AVI +KK
Sbjct: 1206 AVIAQKK 1212