BLASTX nr result

ID: Atractylodes21_contig00002857 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00002857
         (1640 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275974.2| PREDICTED: DNA polymerase I-like [Vitis vini...   451   e-154
ref|XP_004144345.1| PREDICTED: DNA polymerase I-like [Cucumis sa...   432   e-148
ref|XP_003528494.1| PREDICTED: DNA polymerase I, thermostable-li...   437   e-147
ref|XP_003520177.1| PREDICTED: DNA polymerase I, thermostable-li...   430   e-145
ref|NP_001078270.1| 5'-3' exonuclease-like protein [Arabidopsis ...   426   e-143

>ref|XP_002275974.2| PREDICTED: DNA polymerase I-like [Vitis vinifera]
            gi|296084279|emb|CBI24667.3| unnamed protein product
            [Vitis vinifera]
          Length = 441

 Score =  451 bits (1161), Expect(2) = e-154
 Identities = 239/370 (64%), Positives = 287/370 (77%), Gaps = 8/370 (2%)
 Frame = -2

Query: 1570 MGCCQFSHVLLN------NFGRTLYGCSRSFTTNHRARTPLHLVSSSRIRSAKGYCKVSN 1409
            M C + SH  +       N  R+ +  ++    N       +L+ S  I S KG C +SN
Sbjct: 1    MACYRSSHHHIRFLWGNLNCWRSSFSRTQKIGNNSCCLQRRNLIHSPSILSRKGCCTLSN 60

Query: 1408 SSRSELSGTAPAVSLKDLETVKGEATRQ--ESSSFESSQKTENLVNVDSSNGRVMLIDGT 1235
            S  S +   A  +S  +  T+  ++ R+  + +  +S    E  +++ SSNGRVMLIDGT
Sbjct: 61   SLDSSIHEVAHTISYGNT-TISSKSERKLCQGAFVDSVDHKERKMDISSSNGRVMLIDGT 119

Query: 1234 SIIYRSYYKLLANLHHGHLSNADGNGDWVLTISKALSLIIDVLEFTPSHVAVVFDHDGFC 1055
            SIIYR+YYKLLA LHHG+LS+ADGNGDWVLTI  ALSLI+DVL+F PSHVAVVFDH+G  
Sbjct: 120  SIIYRAYYKLLAKLHHGYLSHADGNGDWVLTIFAALSLIVDVLDFIPSHVAVVFDHNGIP 179

Query: 1054 FGNMPQSPTQKFMAKGHTFRHTLYPSYKSNRPPTPDTIVQGLQYLKASIKAMSIKVIEVP 875
            FG+   S  +  MAKG  FRHTLYPSYKSNRPPTPDTIVQGLQYLKASIKAMSIKVIEVP
Sbjct: 180  FGHTSISSKESIMAKGLNFRHTLYPSYKSNRPPTPDTIVQGLQYLKASIKAMSIKVIEVP 239

Query: 874  GVEADDVIGTLAIRSVEAGFKVRVVSPDKDFFQILSPSLRLLRIAPRGVEMVSFGMEDFA 695
            GVEADDVIGTL++RSV+AG+KVRVVSPDKDFFQILSPSLRLLRIAPRG EM SFGMEDFA
Sbjct: 240  GVEADDVIGTLSVRSVDAGYKVRVVSPDKDFFQILSPSLRLLRIAPRGFEMTSFGMEDFA 299

Query: 694  QKYGAIEPSQFVDVMALVGDRSDNIPGVDGIGDVNAVQLISRFGTLENLLQHVDQVEEER 515
            ++YG +EPSQFVDV++LVGD+SDNIPGV+GIG+V+AVQLI++FGTLENLLQ VDQV+EER
Sbjct: 300  KRYGNLEPSQFVDVISLVGDKSDNIPGVEGIGNVHAVQLITKFGTLENLLQCVDQVQEER 359

Query: 514  IRKALIANKE 485
            IRKALI+  +
Sbjct: 360  IRKALISGAD 369



 Score =  122 bits (307), Expect(2) = e-154
 Identities = 58/78 (74%), Positives = 66/78 (84%)
 Frame = -1

Query: 425 ALIANKEQALLSKELALLRSDLPHYMVPFSISDLVFKKPEDNGEKFTNLLTAIGAYAEGF 246
           ALI+  +QA+LSK LALLR DLP YMVPF+  DL+F KPEDNGEKFT+LL AI AYAEGF
Sbjct: 363 ALISGADQAVLSKNLALLRCDLPFYMVPFTTEDLIFTKPEDNGEKFTSLLNAISAYAEGF 422

Query: 245 SLDPVIRRAFYLWRKFEK 192
           S DP+IRRAFYLW+K EK
Sbjct: 423 SADPIIRRAFYLWKKLEK 440


>ref|XP_004144345.1| PREDICTED: DNA polymerase I-like [Cucumis sativus]
          Length = 461

 Score =  432 bits (1111), Expect(2) = e-148
 Identities = 226/326 (69%), Positives = 259/326 (79%), Gaps = 2/326 (0%)
 Frame = -2

Query: 1456 SSSRIRSAKGYCKVSNSSRS-ELSGTAPAVSLKDLETVKGEATRQESSSFESSQKTENLV 1280
            S S + S KGYC  S S  S     T P        T + +   Q   S  +    +   
Sbjct: 65   SFSLLLSPKGYCSSSGSINSANTMDTVPTYHGSSAST-RCQPMVQFQDSLSNPLTFKEDT 123

Query: 1279 NVDS-SNGRVMLIDGTSIIYRSYYKLLANLHHGHLSNADGNGDWVLTISKALSLIIDVLE 1103
             +D+ ++ RVMLIDGTSII+R+YYKLLA LHHGHLS+ADGNGDWVLTI  ALSLI+DVLE
Sbjct: 124  GIDNPADARVMLIDGTSIIFRAYYKLLAKLHHGHLSHADGNGDWVLTIFTALSLIVDVLE 183

Query: 1102 FTPSHVAVVFDHDGFCFGNMPQSPTQKFMAKGHTFRHTLYPSYKSNRPPTPDTIVQGLQY 923
              PSHVAVVFDHDG  +G+   S  + FM+KG TFRHT+YP+YKSNR PTPDT+VQGLQY
Sbjct: 184  IMPSHVAVVFDHDGHPYGHTYISSNENFMSKGSTFRHTIYPAYKSNRAPTPDTVVQGLQY 243

Query: 922  LKASIKAMSIKVIEVPGVEADDVIGTLAIRSVEAGFKVRVVSPDKDFFQILSPSLRLLRI 743
            LKASIK+MSIKVIEVPGVEADDVIGTLA+RSV  G KVRVVSPDKDFFQILSPSLRLLRI
Sbjct: 244  LKASIKSMSIKVIEVPGVEADDVIGTLALRSVAVGCKVRVVSPDKDFFQILSPSLRLLRI 303

Query: 742  APRGVEMVSFGMEDFAQKYGAIEPSQFVDVMALVGDRSDNIPGVDGIGDVNAVQLISRFG 563
            A RG+EMVSFG+EDFA K+G +EPSQFVDVM+LVGD+SDNIPGVDGIG+VNAVQLI+RFG
Sbjct: 304  ASRGIEMVSFGLEDFADKFGVLEPSQFVDVMSLVGDKSDNIPGVDGIGNVNAVQLITRFG 363

Query: 562  TLENLLQHVDQVEEERIRKALIANKE 485
            TLENLLQHVDQVE+ERI+K L+ N E
Sbjct: 364  TLENLLQHVDQVEDERIKKMLVTNAE 389



 Score =  122 bits (307), Expect(2) = e-148
 Identities = 57/78 (73%), Positives = 67/78 (85%)
 Frame = -1

Query: 422 LIANKEQALLSKELALLRSDLPHYMVPFSISDLVFKKPEDNGEKFTNLLTAIGAYAEGFS 243
           L+ N EQA+LSK+LA LRSDLP YMVPF+  DL+FKKPEDNGEKFT+LLTAIGAYAE FS
Sbjct: 384 LVTNAEQAILSKDLATLRSDLPFYMVPFTTRDLLFKKPEDNGEKFTSLLTAIGAYAERFS 443

Query: 242 LDPVIRRAFYLWRKFEKS 189
            DP+IRR  YLW+K +K+
Sbjct: 444 ADPIIRRVLYLWKKLDKN 461


>ref|XP_003528494.1| PREDICTED: DNA polymerase I, thermostable-like [Glycine max]
          Length = 436

 Score =  437 bits (1124), Expect(2) = e-147
 Identities = 234/369 (63%), Positives = 273/369 (73%), Gaps = 7/369 (1%)
 Frame = -2

Query: 1570 MGCCQ-------FSHVLLNNFGRTLYGCSRSFTTNHRARTPLHLVSSSRIRSAKGYCKVS 1412
            M CC         SH LL       +  + SF+ N   RTP  L+ SSR   +KGYC  +
Sbjct: 1    MACCYKYHNLFLHSHFLLRKLPFPSHVYATSFSRN--LRTPW-LLRSSRAPLSKGYCSAT 57

Query: 1411 NSSRSELSGTAPAVSLKDLETVKGEATRQESSSFESSQKTENLVNVDSSNGRVMLIDGTS 1232
            + S   +  T P  +   L    G  T + +    S+   E + N D  NGRVM+IDGTS
Sbjct: 58   SESPGAVPATPPTAAAT-LVPGAGIGTAR-AMQLGSAVNAERVTNSDPLNGRVMIIDGTS 115

Query: 1231 IIYRSYYKLLANLHHGHLSNADGNGDWVLTISKALSLIIDVLEFTPSHVAVVFDHDGFCF 1052
            II+R+YYKLLA LHHGHL++ADGNGDWVL +  ALSLIIDVLEF PSHV VVFDHDG   
Sbjct: 116  IIHRAYYKLLAKLHHGHLTHADGNGDWVLMMFTALSLIIDVLEFIPSHVVVVFDHDGIPI 175

Query: 1051 GNMPQSPTQKFMAKGHTFRHTLYPSYKSNRPPTPDTIVQGLQYLKASIKAMSIKVIEVPG 872
            G+   S  + F AKG  FRH LYP+YKSNRPPTPDTIVQGLQY KASIKAMSIK+IEVPG
Sbjct: 176  GHTYNSSKESFTAKGQNFRHNLYPAYKSNRPPTPDTIVQGLQYFKASIKAMSIKIIEVPG 235

Query: 871  VEADDVIGTLAIRSVEAGFKVRVVSPDKDFFQILSPSLRLLRIAPRGVEMVSFGMEDFAQ 692
            VEADDVIGTLA+RSV+AG+KVRVVSPDKDFFQILSPSLRLLRIAPRG +MVSFG+EDF +
Sbjct: 236  VEADDVIGTLALRSVDAGYKVRVVSPDKDFFQILSPSLRLLRIAPRGDQMVSFGVEDFEE 295

Query: 691  KYGAIEPSQFVDVMALVGDRSDNIPGVDGIGDVNAVQLISRFGTLENLLQHVDQVEEERI 512
            +YG ++PSQF D++AL GDRSDNIPGV GIGDV+AVQLISRFGTLE LL  VDQ++E+RI
Sbjct: 296  RYGGLKPSQFADMIALTGDRSDNIPGVHGIGDVHAVQLISRFGTLERLLDSVDQIKEDRI 355

Query: 511  RKALIANKE 485
            +KALI N E
Sbjct: 356  KKALIENAE 364



 Score =  113 bits (283), Expect(2) = e-147
 Identities = 56/77 (72%), Positives = 62/77 (80%)
 Frame = -1

Query: 425 ALIANKEQALLSKELALLRSDLPHYMVPFSISDLVFKKPEDNGEKFTNLLTAIGAYAEGF 246
           ALI N EQA+LSKELALLRSDLP YMVP +I DL F KPEDNG KF +LLTAI AYAEGF
Sbjct: 358 ALIENAEQAVLSKELALLRSDLPLYMVPLAIRDLSFNKPEDNGSKFNSLLTAISAYAEGF 417

Query: 245 SLDPVIRRAFYLWRKFE 195
           S DP+IRR  +LW K +
Sbjct: 418 SADPIIRRTVHLWGKLD 434


>ref|XP_003520177.1| PREDICTED: DNA polymerase I, thermostable-like [Glycine max]
          Length = 444

 Score =  430 bits (1105), Expect(2) = e-145
 Identities = 233/375 (62%), Positives = 277/375 (73%), Gaps = 13/375 (3%)
 Frame = -2

Query: 1570 MGCC---QFSHVLLNNFGRTL----YGCSRSFTTNHRARTPLHLVSS-SRIRSAKGYCKV 1415
            M CC   QF  +  ++F R L    +  +  FT N   +TP  L+SS SR   +KGYC+ 
Sbjct: 1    MACCYKYQFLFLHSHSFWRKLPFPRHVTASGFTCN--LQTPSLLLSSRSRALLSKGYCRA 58

Query: 1414 SNSSRSELSGT-----APAVSLKDLETVKGEATRQESSSFESSQKTENLVNVDSSNGRVM 1250
            ++ S   +  T     A    + +     G  T Q   S  S+   E + N +  NGRVM
Sbjct: 59   TSESPGAVPATPRSAAASGTLIPEAGIGIGTGTAQALQS-GSAGNAELVTNAEPLNGRVM 117

Query: 1249 LIDGTSIIYRSYYKLLANLHHGHLSNADGNGDWVLTISKALSLIIDVLEFTPSHVAVVFD 1070
            +IDGTSII+R+YYKLLA LHHGHL++ADGNGDWVL +  ALSLIIDVL+F PSHV VVFD
Sbjct: 118  IIDGTSIIHRAYYKLLAKLHHGHLTHADGNGDWVLMMFTALSLIIDVLKFIPSHVVVVFD 177

Query: 1069 HDGFCFGNMPQSPTQKFMAKGHTFRHTLYPSYKSNRPPTPDTIVQGLQYLKASIKAMSIK 890
            HDG   G+   S  + F AKG  FRH LYP+YKSNRPPTPDTIVQGLQY KASIKAMSIK
Sbjct: 178  HDGIPIGHTYNSSKESFTAKGQNFRHNLYPAYKSNRPPTPDTIVQGLQYFKASIKAMSIK 237

Query: 889  VIEVPGVEADDVIGTLAIRSVEAGFKVRVVSPDKDFFQILSPSLRLLRIAPRGVEMVSFG 710
            +IEVPGVEADDVIGTLA+RSV+AG+KVRVVSPDKDFFQILSPSLRLLRIAPRG EMVSFG
Sbjct: 238  IIEVPGVEADDVIGTLALRSVDAGYKVRVVSPDKDFFQILSPSLRLLRIAPRGDEMVSFG 297

Query: 709  MEDFAQKYGAIEPSQFVDVMALVGDRSDNIPGVDGIGDVNAVQLISRFGTLENLLQHVDQ 530
            +EDF ++YG ++PSQF D++AL GDRSDNIPGV GIGDV+AVQL+SRFGTLE LL  VDQ
Sbjct: 298  VEDFEERYGGLKPSQFADMIALTGDRSDNIPGVHGIGDVHAVQLLSRFGTLERLLDSVDQ 357

Query: 529  VEEERIRKALIANKE 485
            ++E+ I+KALI N E
Sbjct: 358  IKEDHIKKALIENAE 372



 Score =  115 bits (287), Expect(2) = e-145
 Identities = 56/77 (72%), Positives = 63/77 (81%)
 Frame = -1

Query: 425 ALIANKEQALLSKELALLRSDLPHYMVPFSISDLVFKKPEDNGEKFTNLLTAIGAYAEGF 246
           ALI N EQA+LSKELALLRSDLP YMVP +I DL F KPEDNG KF +LLTAI AYAEGF
Sbjct: 366 ALIENAEQAVLSKELALLRSDLPLYMVPLAIKDLSFNKPEDNGSKFNSLLTAISAYAEGF 425

Query: 245 SLDPVIRRAFYLWRKFE 195
           S DP+IRR  +LW+K +
Sbjct: 426 SADPIIRRTVHLWQKLD 442


>ref|NP_001078270.1| 5'-3' exonuclease-like protein [Arabidopsis thaliana]
            gi|332645360|gb|AEE78881.1| 5'-3' exonuclease-like
            protein [Arabidopsis thaliana]
          Length = 448

 Score =  426 bits (1094), Expect(2) = e-143
 Identities = 224/327 (68%), Positives = 266/327 (81%), Gaps = 1/327 (0%)
 Frame = -2

Query: 1462 LVSSSRIRSAKGYCKVSNSSRSELSGTAPAVSLKDLETVKGEATRQESS-SFESSQKTEN 1286
            L+S S  RSAK YC  S+ + SE S  A + S   L ++  + T Q     F+S ++  +
Sbjct: 55   LISPSLARSAKYYC--SSVAVSEFSNEAASGST--LTSISEDVTPQSIKYPFKSEERVAS 110

Query: 1285 LVNVDSSNGRVMLIDGTSIIYRSYYKLLANLHHGHLSNADGNGDWVLTISKALSLIIDVL 1106
                 SSNGRVMLIDGTSIIYR+YYKLLA L+HGHL++ADGN DWVLTI  +LSL+IDVL
Sbjct: 111  --TAASSNGRVMLIDGTSIIYRAYYKLLARLNHGHLAHADGNADWVLTIFSSLSLLIDVL 168

Query: 1105 EFTPSHVAVVFDHDGFCFGNMPQSPTQKFMAKGHTFRHTLYPSYKSNRPPTPDTIVQGLQ 926
            +F PSHVAVVFDHDG  +G    S T    AKG  FRHTLYP+YKSNRPPTPDTIVQGLQ
Sbjct: 169  KFLPSHVAVVFDHDGVPYGTTSNSSTGYRSAKGMNFRHTLYPAYKSNRPPTPDTIVQGLQ 228

Query: 925  YLKASIKAMSIKVIEVPGVEADDVIGTLAIRSVEAGFKVRVVSPDKDFFQILSPSLRLLR 746
            YLKASIKAMSIKVIEVPGVEADDVIGTLA+RS+ AGFKVRVVSPDKDFFQILSPSLRLLR
Sbjct: 229  YLKASIKAMSIKVIEVPGVEADDVIGTLAMRSISAGFKVRVVSPDKDFFQILSPSLRLLR 288

Query: 745  IAPRGVEMVSFGMEDFAQKYGAIEPSQFVDVMALVGDRSDNIPGVDGIGDVNAVQLISRF 566
            + PRG EM SFGMEDFA+K+G +EP+QFVD++AL GD+SDNIPGVDGIG+V+AV+LISRF
Sbjct: 289  LTPRGSEMASFGMEDFAKKFGNLEPAQFVDIIALAGDKSDNIPGVDGIGNVHAVELISRF 348

Query: 565  GTLENLLQHVDQVEEERIRKALIANKE 485
            GTLENLLQ VD+++E +I+++LIA+ +
Sbjct: 349  GTLENLLQSVDEIKEGKIKESLIASAD 375



 Score =  112 bits (281), Expect(2) = e-143
 Identities = 55/77 (71%), Positives = 63/77 (81%)
 Frame = -1

Query: 425 ALIANKEQALLSKELALLRSDLPHYMVPFSISDLVFKKPEDNGEKFTNLLTAIGAYAEGF 246
           +LIA+ +QA+LSK+LALLRSDLP Y+VPF   DL FKKPEDNGEK ++LL AI  YAEGF
Sbjct: 369 SLIASADQAILSKKLALLRSDLPDYIVPFDTKDLTFKKPEDNGEKLSSLLIAIADYAEGF 428

Query: 245 SLDPVIRRAFYLWRKFE 195
           S DPVIRRAF LW K E
Sbjct: 429 SADPVIRRAFRLWEKLE 445


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