BLASTX nr result

ID: Atractylodes21_contig00002832 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00002832
         (661 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001238295.1| uncharacterized protein LOC100527842 [Glycin...   147   2e-33
ref|XP_003533298.1| PREDICTED: dynein light chain 2, cytoplasmic...   145   5e-33
ref|NP_193328.4| dynein light chain LC8-type [Arabidopsis thalia...   145   7e-33
ref|XP_003546364.1| PREDICTED: dynein light chain 2, cytoplasmic...   145   7e-33
ref|XP_002870199.1| At4g15930 [Arabidopsis lyrata subsp. lyrata]...   145   9e-33

>ref|NP_001238295.1| uncharacterized protein LOC100527842 [Glycine max]
           gi|255633354|gb|ACU17034.1| unknown [Glycine max]
          Length = 118

 Score =  147 bits (371), Expect = 2e-33
 Identities = 75/126 (59%), Positives = 89/126 (70%)
 Frame = +1

Query: 46  MSEERKRSLVGVMAPAKSLPSADDRXXXXXXXXXXXXXXXXXXXXXXADMKEEMQSEAVN 225
           MSEE K++ VG +    + P++DD+                      ADM  +MQ EAV+
Sbjct: 1   MSEEAKKNFVGALT---ARPTSDDQKQAPALNVPPKKVIIKS-----ADMIPDMQKEAVD 52

Query: 226 IAISAFENLSVEKDIAEQIKKEFDKNHGPTWHCIVGKNFGSYVTHETNHFVYFYLDSKAV 405
           IA++AFE  +VEKD+AEQIKKEFDK HGPTWHCIVG+NFGSYVTHETNHFVYFYLD KAV
Sbjct: 53  IAVAAFERYNVEKDVAEQIKKEFDKRHGPTWHCIVGRNFGSYVTHETNHFVYFYLDQKAV 112

Query: 406 LLFKSG 423
           LLFKSG
Sbjct: 113 LLFKSG 118


>ref|XP_003533298.1| PREDICTED: dynein light chain 2, cytoplasmic-like [Glycine max]
          Length = 157

 Score =  145 bits (367), Expect = 5e-33
 Identities = 73/127 (57%), Positives = 90/127 (70%)
 Frame = +1

Query: 43  EMSEERKRSLVGVMAPAKSLPSADDRXXXXXXXXXXXXXXXXXXXXXXADMKEEMQSEAV 222
           +MSE+ K+++ G +    + P++DD+                      ADM  +MQ EAV
Sbjct: 35  KMSEDAKKNIAGALT---ARPNSDDQKPSPLPSPAPAVPPKKVIIKS-ADMIPDMQKEAV 90

Query: 223 NIAISAFENLSVEKDIAEQIKKEFDKNHGPTWHCIVGKNFGSYVTHETNHFVYFYLDSKA 402
           +IA++AFE  +VEKD+AEQIKKEFDK HGPTWHCIVG+NFGSYVTHETNHFVYFYLD KA
Sbjct: 91  DIAVAAFEKYNVEKDVAEQIKKEFDKRHGPTWHCIVGRNFGSYVTHETNHFVYFYLDQKA 150

Query: 403 VLLFKSG 423
           VLLFKSG
Sbjct: 151 VLLFKSG 157


>ref|NP_193328.4| dynein light chain LC8-type [Arabidopsis thaliana]
           gi|28466885|gb|AAO44051.1| At4g15930 [Arabidopsis
           thaliana] gi|332658267|gb|AEE83667.1| dynein light chain
           LC8-type [Arabidopsis thaliana]
          Length = 123

 Score =  145 bits (366), Expect = 7e-33
 Identities = 77/126 (61%), Positives = 87/126 (69%)
 Frame = +1

Query: 46  MSEERKRSLVGVMAPAKSLPSADDRXXXXXXXXXXXXXXXXXXXXXXADMKEEMQSEAVN 225
           MS+ R++  V   APA+++   DDR                      ADMK++MQ EA+ 
Sbjct: 1   MSDGRRKKSVNGGAPAQTI--LDDRRSSLPEVEASPPAGKRAVIKS-ADMKDDMQKEAIE 57

Query: 226 IAISAFENLSVEKDIAEQIKKEFDKNHGPTWHCIVGKNFGSYVTHETNHFVYFYLDSKAV 405
           IAISAFE  SVEKDIAE IKKEFDK HG TWHCIVG+NFGSYVTHETNHFVYFYLD KAV
Sbjct: 58  IAISAFEKYSVEKDIAENIKKEFDKKHGATWHCIVGRNFGSYVTHETNHFVYFYLDQKAV 117

Query: 406 LLFKSG 423
           LLFKSG
Sbjct: 118 LLFKSG 123


>ref|XP_003546364.1| PREDICTED: dynein light chain 2, cytoplasmic-like [Glycine max]
          Length = 122

 Score =  145 bits (366), Expect = 7e-33
 Identities = 73/126 (57%), Positives = 89/126 (70%)
 Frame = +1

Query: 46  MSEERKRSLVGVMAPAKSLPSADDRXXXXXXXXXXXXXXXXXXXXXXADMKEEMQSEAVN 225
           MSE+ K+++ G +    + P++DD+                      ADM  +MQ EAV+
Sbjct: 1   MSEDAKKNIAGALT---ARPNSDDQKLSPLPSPAPAVPPKKVIIKS-ADMIPDMQKEAVD 56

Query: 226 IAISAFENLSVEKDIAEQIKKEFDKNHGPTWHCIVGKNFGSYVTHETNHFVYFYLDSKAV 405
           IA++AFE  +VEKD+AEQIKKEFDK HGPTWHCIVG+NFGSYVTHETNHFVYFYLD KAV
Sbjct: 57  IAVAAFEKYNVEKDVAEQIKKEFDKRHGPTWHCIVGRNFGSYVTHETNHFVYFYLDQKAV 116

Query: 406 LLFKSG 423
           LLFKSG
Sbjct: 117 LLFKSG 122


>ref|XP_002870199.1| At4g15930 [Arabidopsis lyrata subsp. lyrata]
           gi|297316035|gb|EFH46458.1| At4g15930 [Arabidopsis
           lyrata subsp. lyrata]
          Length = 123

 Score =  145 bits (365), Expect = 9e-33
 Identities = 76/126 (60%), Positives = 89/126 (70%)
 Frame = +1

Query: 46  MSEERKRSLVGVMAPAKSLPSADDRXXXXXXXXXXXXXXXXXXXXXXADMKEEMQSEAVN 225
           MS+ R++  V   APA+++  +DDR                      ADMK++MQ EA++
Sbjct: 1   MSDGRRKKSVNGGAPAQTI--SDDRRSSLPEVEASPPAGKRAVIKS-ADMKDDMQKEAID 57

Query: 226 IAISAFENLSVEKDIAEQIKKEFDKNHGPTWHCIVGKNFGSYVTHETNHFVYFYLDSKAV 405
           IAISAFE  SVEKDIAE IKKEFDK HG TWHCIVG+NFGSYVTHETNHFVYFYL+ KAV
Sbjct: 58  IAISAFEKYSVEKDIAENIKKEFDKKHGATWHCIVGRNFGSYVTHETNHFVYFYLEQKAV 117

Query: 406 LLFKSG 423
           LLFKSG
Sbjct: 118 LLFKSG 123


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