BLASTX nr result

ID: Atractylodes21_contig00002830 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00002830
         (806 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002524303.1| polypyrimidine tract binding protein, putati...   284   1e-74
ref|XP_003548101.1| PREDICTED: polypyrimidine tract-binding prot...   275   7e-72
ref|XP_003518587.1| PREDICTED: polypyrimidine tract-binding prot...   275   7e-72
ref|XP_002893943.1| predicted protein [Arabidopsis lyrata subsp....   272   6e-71
ref|XP_002306709.1| predicted protein [Populus trichocarpa] gi|2...   272   6e-71

>ref|XP_002524303.1| polypyrimidine tract binding protein, putative [Ricinus communis]
           gi|223536394|gb|EEF38043.1| polypyrimidine tract binding
           protein, putative [Ricinus communis]
          Length = 437

 Score =  284 bits (727), Expect = 1e-74
 Identities = 139/154 (90%), Positives = 147/154 (95%)
 Frame = -3

Query: 804 RNKPDHALVQMGDGFQAELAVQFLKGAEVFGKRLEVNFSKHANITMGAETHEYLNSNLNR 625
           RNKPDHALVQMGDGFQAELAV FLKGA +FGKRLEVNFSKH NIT GA+THEY+NSNLNR
Sbjct: 280 RNKPDHALVQMGDGFQAELAVHFLKGAVLFGKRLEVNFSKHPNITQGADTHEYVNSNLNR 339

Query: 624 FNRNAAKNYRYCCSPTKMIHLSTLPQDVTEEEIVSHLEEHGSIVNTKLFEMNGKKQALVL 445
           FNRNAAKNYRYCCSPTKMIHLSTLPQD+TEEEIVSHLEEHG+IVNTKLFEMNGKKQALVL
Sbjct: 340 FNRNAAKNYRYCCSPTKMIHLSTLPQDITEEEIVSHLEEHGTIVNTKLFEMNGKKQALVL 399

Query: 444 FETEEQATEALVCKHASSLGDSMIRISFSQLQTI 343
           FETEEQATEALVCKHA S+  S+IRISFSQLQ+I
Sbjct: 400 FETEEQATEALVCKHAISVAGSIIRISFSQLQSI 433


>ref|XP_003548101.1| PREDICTED: polypyrimidine tract-binding protein homolog 3-like
           [Glycine max]
          Length = 439

 Score =  275 bits (704), Expect = 7e-72
 Identities = 132/154 (85%), Positives = 145/154 (94%)
 Frame = -3

Query: 804 RNKPDHALVQMGDGFQAELAVQFLKGAEVFGKRLEVNFSKHANITMGAETHEYLNSNLNR 625
           RNKPDHAL+QMGDGFQAELAV FLKGA +FGKRLEVN+SKHANIT GA+THEY+NSNLNR
Sbjct: 286 RNKPDHALIQMGDGFQAELAVHFLKGAMLFGKRLEVNYSKHANITQGADTHEYVNSNLNR 345

Query: 624 FNRNAAKNYRYCCSPTKMIHLSTLPQDVTEEEIVSHLEEHGSIVNTKLFEMNGKKQALVL 445
           FNRNAAKNYRYCCSPTKM+HLSTLPQD+TEEE+VS LEEHG+IVN+K+FEMNGKKQALV 
Sbjct: 346 FNRNAAKNYRYCCSPTKMVHLSTLPQDITEEEVVSLLEEHGTIVNSKVFEMNGKKQALVQ 405

Query: 444 FETEEQATEALVCKHASSLGDSMIRISFSQLQTI 343
           FETEEQATEALVCKHAS L  S++RISFSQLQ I
Sbjct: 406 FETEEQATEALVCKHASPLSGSVVRISFSQLQNI 439


>ref|XP_003518587.1| PREDICTED: polypyrimidine tract-binding protein homolog 3-like
           [Glycine max]
          Length = 439

 Score =  275 bits (704), Expect = 7e-72
 Identities = 134/154 (87%), Positives = 144/154 (93%)
 Frame = -3

Query: 804 RNKPDHALVQMGDGFQAELAVQFLKGAEVFGKRLEVNFSKHANITMGAETHEYLNSNLNR 625
           RNKPDHAL+QMGDGFQAELAV FLKGA +FGKRLEVN+SKHANIT GA+THEY NSNLNR
Sbjct: 286 RNKPDHALIQMGDGFQAELAVHFLKGAMLFGKRLEVNYSKHANITQGADTHEYANSNLNR 345

Query: 624 FNRNAAKNYRYCCSPTKMIHLSTLPQDVTEEEIVSHLEEHGSIVNTKLFEMNGKKQALVL 445
           FNRNAAKNYRYCCSPTKMIHLSTLPQD+TEEEIVS LEEHG+IVN+K+FEMNGKKQALV 
Sbjct: 346 FNRNAAKNYRYCCSPTKMIHLSTLPQDITEEEIVSLLEEHGTIVNSKVFEMNGKKQALVQ 405

Query: 444 FETEEQATEALVCKHASSLGDSMIRISFSQLQTI 343
           FETEEQATEALVCKHAS L  S++RISFSQLQ I
Sbjct: 406 FETEEQATEALVCKHASPLSGSVVRISFSQLQNI 439


>ref|XP_002893943.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297339785|gb|EFH70202.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 432

 Score =  272 bits (696), Expect = 6e-71
 Identities = 130/154 (84%), Positives = 145/154 (94%)
 Frame = -3

Query: 804 RNKPDHALVQMGDGFQAELAVQFLKGAEVFGKRLEVNFSKHANITMGAETHEYLNSNLNR 625
           RNKPDHALVQMGDGFQAELAV FLKGA +FGKRLEVNFSKH NIT G ++H+Y+NSNLNR
Sbjct: 279 RNKPDHALVQMGDGFQAELAVHFLKGAVLFGKRLEVNFSKHPNITPGTDSHDYVNSNLNR 338

Query: 624 FNRNAAKNYRYCCSPTKMIHLSTLPQDVTEEEIVSHLEEHGSIVNTKLFEMNGKKQALVL 445
           FNRNAAKNYRYCCSPTKMIHLSTLPQDVTEEE+++H++EHG+IVNTK+FEMNGKKQALV 
Sbjct: 339 FNRNAAKNYRYCCSPTKMIHLSTLPQDVTEEEVMNHVQEHGAIVNTKVFEMNGKKQALVQ 398

Query: 444 FETEEQATEALVCKHASSLGDSMIRISFSQLQTI 343
           FE EE+A EALVCKHA+SLG S+IRISFSQLQTI
Sbjct: 399 FENEEEAAEALVCKHATSLGGSIIRISFSQLQTI 432


>ref|XP_002306709.1| predicted protein [Populus trichocarpa] gi|222856158|gb|EEE93705.1|
           predicted protein [Populus trichocarpa]
          Length = 434

 Score =  272 bits (696), Expect = 6e-71
 Identities = 131/154 (85%), Positives = 146/154 (94%)
 Frame = -3

Query: 804 RNKPDHALVQMGDGFQAELAVQFLKGAEVFGKRLEVNFSKHANITMGAETHEYLNSNLNR 625
           RNKPDHALVQMGDGFQAELAV FLKGA +FGKR+EVNFSKH NIT GA+THEY++SNLNR
Sbjct: 277 RNKPDHALVQMGDGFQAELAVHFLKGAMLFGKRMEVNFSKHPNITQGADTHEYMHSNLNR 336

Query: 624 FNRNAAKNYRYCCSPTKMIHLSTLPQDVTEEEIVSHLEEHGSIVNTKLFEMNGKKQALVL 445
           FNRNAAKNYRYCCSPTKMIHLSTLPQ +TE+EIVS +EEHG++VNTKLFEMNGKKQALVL
Sbjct: 337 FNRNAAKNYRYCCSPTKMIHLSTLPQVITEDEIVSLVEEHGTVVNTKLFEMNGKKQALVL 396

Query: 444 FETEEQATEALVCKHASSLGDSMIRISFSQLQTI 343
           FETEE+ATEALVCKHA+SL  S++RISFSQLQ+I
Sbjct: 397 FETEEEATEALVCKHATSLAGSIVRISFSQLQSI 430


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