BLASTX nr result

ID: Atractylodes21_contig00002821 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00002821
         (595 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003562090.1| PREDICTED: uncharacterized protein LOC100840...    83   1e-23
dbj|BAF36296.1| hypothetical protein [Ipomoea trifida]                 81   3e-23
ref|XP_002879125.1| cdk-subunit 1 [Arabidopsis lyrata subsp. lyr...    81   3e-23
gb|AAS79576.1| putative CDK regulatory subunit [Ipomoea trifida]       81   3e-23
ref|NP_180363.1| cyclin-dependent kinases regulatory subunit 1 [...    81   4e-23

>ref|XP_003562090.1| PREDICTED: uncharacterized protein LOC100840494 [Brachypodium
           distachyon]
          Length = 184

 Score = 82.8 bits (203), Expect(2) = 1e-23
 Identities = 45/63 (71%), Positives = 49/63 (77%), Gaps = 3/63 (4%)
 Frame = +2

Query: 23  TITTTLPLSLKGLY*IC---EIKAIMGQIQYSEKYFDDTFEYRHVVLPPEVAKLLPKNRL 193
           +I T LPL L+ L       E+   MGQIQYSEKYFDDTFEYRHVVLPPEVAKLLPKNRL
Sbjct: 70  SIRTNLPLPLRPLRSKRLDRELLVEMGQIQYSEKYFDDTFEYRHVVLPPEVAKLLPKNRL 129

Query: 194 LSE 202
           L+E
Sbjct: 130 LAE 132



 Score = 52.4 bits (124), Expect(2) = 1e-23
 Identities = 20/21 (95%), Positives = 21/21 (100%)
 Frame = +1

Query: 301 RGWVHYAIHRPEPHIMLFRRP 363
           RGWVHYA+HRPEPHIMLFRRP
Sbjct: 144 RGWVHYAVHRPEPHIMLFRRP 164


>dbj|BAF36296.1| hypothetical protein [Ipomoea trifida]
          Length = 1291

 Score = 81.3 bits (199), Expect(2) = 3e-23
 Identities = 38/38 (100%), Positives = 38/38 (100%)
 Frame = +2

Query: 89   MGQIQYSEKYFDDTFEYRHVVLPPEVAKLLPKNRLLSE 202
            MGQIQYSEKYFDDTFEYRHVVLPPEVAKLLPKNRLLSE
Sbjct: 1204 MGQIQYSEKYFDDTFEYRHVVLPPEVAKLLPKNRLLSE 1241



 Score = 52.8 bits (125), Expect(2) = 3e-23
 Identities = 21/21 (100%), Positives = 21/21 (100%)
 Frame = +1

Query: 301  RGWVHYAIHRPEPHIMLFRRP 363
            RGWVHYAIHRPEPHIMLFRRP
Sbjct: 1253 RGWVHYAIHRPEPHIMLFRRP 1273


>ref|XP_002879125.1| cdk-subunit 1 [Arabidopsis lyrata subsp. lyrata]
           gi|297324964|gb|EFH55384.1| cdk-subunit 1 [Arabidopsis
           lyrata subsp. lyrata]
          Length = 87

 Score = 81.3 bits (199), Expect(2) = 3e-23
 Identities = 38/38 (100%), Positives = 38/38 (100%)
 Frame = +2

Query: 89  MGQIQYSEKYFDDTFEYRHVVLPPEVAKLLPKNRLLSE 202
           MGQIQYSEKYFDDTFEYRHVVLPPEVAKLLPKNRLLSE
Sbjct: 1   MGQIQYSEKYFDDTFEYRHVVLPPEVAKLLPKNRLLSE 38



 Score = 52.8 bits (125), Expect(2) = 3e-23
 Identities = 21/21 (100%), Positives = 21/21 (100%)
 Frame = +1

Query: 301 RGWVHYAIHRPEPHIMLFRRP 363
           RGWVHYAIHRPEPHIMLFRRP
Sbjct: 50  RGWVHYAIHRPEPHIMLFRRP 70


>gb|AAS79576.1| putative CDK regulatory subunit [Ipomoea trifida]
          Length = 88

 Score = 81.3 bits (199), Expect(2) = 3e-23
 Identities = 38/38 (100%), Positives = 38/38 (100%)
 Frame = +2

Query: 89  MGQIQYSEKYFDDTFEYRHVVLPPEVAKLLPKNRLLSE 202
           MGQIQYSEKYFDDTFEYRHVVLPPEVAKLLPKNRLLSE
Sbjct: 1   MGQIQYSEKYFDDTFEYRHVVLPPEVAKLLPKNRLLSE 38



 Score = 52.8 bits (125), Expect(2) = 3e-23
 Identities = 21/21 (100%), Positives = 21/21 (100%)
 Frame = +1

Query: 301 RGWVHYAIHRPEPHIMLFRRP 363
           RGWVHYAIHRPEPHIMLFRRP
Sbjct: 50  RGWVHYAIHRPEPHIMLFRRP 70


>ref|NP_180363.1| cyclin-dependent kinases regulatory subunit 1 [Arabidopsis
           thaliana] gi|75097781|sp|O23249.1|CKS1_ARATH RecName:
           Full=Cyclin-dependent kinases regulatory subunit 1;
           AltName: Full=CKS1-At gi|2274859|emb|CAA03859.1| Cks1
           protein [Arabidopsis thaliana] gi|4510420|gb|AAD21506.1|
           putative cyclin-dependent kinase regulatory subunit
           [Arabidopsis thaliana] gi|21593913|gb|AAM65878.1|
           putative cyclin-dependent kinase regulatory subunit
           [Arabidopsis thaliana] gi|51969580|dbj|BAD43482.1|
           putative cyclin-dependent kinase regulatory subunit
           [Arabidopsis thaliana] gi|51969798|dbj|BAD43591.1|
           putative cyclin-dependent kinase regulatory subunit
           [Arabidopsis thaliana] gi|51970380|dbj|BAD43882.1|
           putative cyclin-dependent kinase regulatory subunit
           [Arabidopsis thaliana] gi|88010880|gb|ABD38867.1|
           At2g27960 [Arabidopsis thaliana]
           gi|330252970|gb|AEC08064.1| cyclin-dependent kinases
           regulatory subunit 1 [Arabidopsis thaliana]
          Length = 87

 Score = 81.3 bits (199), Expect(2) = 4e-23
 Identities = 38/38 (100%), Positives = 38/38 (100%)
 Frame = +2

Query: 89  MGQIQYSEKYFDDTFEYRHVVLPPEVAKLLPKNRLLSE 202
           MGQIQYSEKYFDDTFEYRHVVLPPEVAKLLPKNRLLSE
Sbjct: 1   MGQIQYSEKYFDDTFEYRHVVLPPEVAKLLPKNRLLSE 38



 Score = 52.4 bits (124), Expect(2) = 4e-23
 Identities = 20/21 (95%), Positives = 21/21 (100%)
 Frame = +1

Query: 301 RGWVHYAIHRPEPHIMLFRRP 363
           RGWVHYA+HRPEPHIMLFRRP
Sbjct: 50  RGWVHYAVHRPEPHIMLFRRP 70


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