BLASTX nr result

ID: Atractylodes21_contig00002798 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00002798
         (345 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280604.1| PREDICTED: 30S ribosomal protein S1, chlorop...   199   2e-49
ref|XP_002519282.1| tex protein-relatedtranscription accessory p...   198   4e-49
ref|XP_004147619.1| PREDICTED: 30S ribosomal protein S1, chlorop...   197   1e-48
sp|P29344.1|RR1_SPIOL RecName: Full=30S ribosomal protein S1, ch...   195   3e-48
dbj|BAH57026.1| AT5G30510 [Arabidopsis thaliana]                      193   1e-47

>ref|XP_002280604.1| PREDICTED: 30S ribosomal protein S1, chloroplastic [Vitis vinifera]
           gi|296083203|emb|CBI22839.3| unnamed protein product
           [Vitis vinifera]
          Length = 410

 Score =  199 bits (507), Expect = 2e-49
 Identities = 95/114 (83%), Positives = 105/114 (92%)
 Frame = -3

Query: 343 YERCRTAPYEGVAFTVDDFHAAIEKYDYNSEIGTKVKGTVFNIDANGALVDVTAKSSAFL 164
           YERCRTAP EGV+F+ DDF++A++KYD+NSEIGTKVKGTVF  D NGALVD+TAKSSA+L
Sbjct: 63  YERCRTAPTEGVSFSADDFYSALDKYDFNSEIGTKVKGTVFCTDTNGALVDITAKSSAYL 122

Query: 163 PIREACIHGIKHVEEAGIVPGVREEFVIIGENEHDDSLILSLRQIQYDLAWERC 2
           P+ EACIH IKHVEEAGIVPGVREEFVIIGENE DDSLILSLR IQYDLAWERC
Sbjct: 123 PVYEACIHKIKHVEEAGIVPGVREEFVIIGENEADDSLILSLRSIQYDLAWERC 176


>ref|XP_002519282.1| tex protein-relatedtranscription accessory protein, putative
           [Ricinus communis] gi|223541597|gb|EEF43146.1| tex
           protein-relatedtranscription accessory protein, putative
           [Ricinus communis]
          Length = 412

 Score =  198 bits (503), Expect = 4e-49
 Identities = 93/114 (81%), Positives = 105/114 (92%)
 Frame = -3

Query: 343 YERCRTAPYEGVAFTVDDFHAAIEKYDYNSEIGTKVKGTVFNIDANGALVDVTAKSSAFL 164
           YERCRTAP EGVAFT +DFH+A+EKYD+NSEIGT VKGTVF  DANGA+VD+TAKSSA+L
Sbjct: 65  YERCRTAPMEGVAFTAEDFHSALEKYDFNSEIGTTVKGTVFMTDANGAVVDITAKSSAYL 124

Query: 163 PIREACIHGIKHVEEAGIVPGVREEFVIIGENEHDDSLILSLRQIQYDLAWERC 2
           P++EACIH IKHVEEAGIVPG+ +EFVIIGENE DDSLILSLR IQYDL+WERC
Sbjct: 125 PVQEACIHKIKHVEEAGIVPGLTQEFVIIGENEADDSLILSLRAIQYDLSWERC 178


>ref|XP_004147619.1| PREDICTED: 30S ribosomal protein S1, chloroplastic-like [Cucumis
           sativus] gi|449517357|ref|XP_004165712.1| PREDICTED: 30S
           ribosomal protein S1, chloroplastic-like [Cucumis
           sativus]
          Length = 413

 Score =  197 bits (500), Expect = 1e-48
 Identities = 91/114 (79%), Positives = 105/114 (92%)
 Frame = -3

Query: 343 YERCRTAPYEGVAFTVDDFHAAIEKYDYNSEIGTKVKGTVFNIDANGALVDVTAKSSAFL 164
           YERCR AP EG++FT++DFHAA+EKYD++SE+GTKVKGTVF  D NGALVD+TAKSSA+L
Sbjct: 67  YERCRNAPVEGISFTLEDFHAALEKYDFDSELGTKVKGTVFCTDNNGALVDITAKSSAYL 126

Query: 163 PIREACIHGIKHVEEAGIVPGVREEFVIIGENEHDDSLILSLRQIQYDLAWERC 2
           P++EACIH IKHVEEAG+ PG+REEFVIIGENE DDSLILSLR IQYDLAWERC
Sbjct: 127 PLQEACIHRIKHVEEAGVFPGLREEFVIIGENESDDSLILSLRSIQYDLAWERC 180


>sp|P29344.1|RR1_SPIOL RecName: Full=30S ribosomal protein S1, chloroplastic; AltName:
           Full=CS1; Flags: Precursor gi|18060|emb|CAA46927.1|
           ribosomal protein S1 [Spinacia oleracea]
           gi|170143|gb|AAA34045.1| chloroplast ribosomal protein
           S1 [Spinacia oleracea]
          Length = 411

 Score =  195 bits (496), Expect = 3e-48
 Identities = 91/114 (79%), Positives = 106/114 (92%)
 Frame = -3

Query: 343 YERCRTAPYEGVAFTVDDFHAAIEKYDYNSEIGTKVKGTVFNIDANGALVDVTAKSSAFL 164
           YERCR AP EGV+FT+DDFH A++KYD+NSE+G++VKGTVF  DANGALVD+TAKSSA+L
Sbjct: 64  YERCRNAPMEGVSFTIDDFHTALDKYDFNSEMGSRVKGTVFCTDANGALVDITAKSSAYL 123

Query: 163 PIREACIHGIKHVEEAGIVPGVREEFVIIGENEHDDSLILSLRQIQYDLAWERC 2
           P+ EACI+ IK+VEEAGI+PGVREEFVIIGENE DDSLILSLRQIQY+LAWERC
Sbjct: 124 PLAEACIYRIKNVEEAGIIPGVREEFVIIGENEADDSLILSLRQIQYELAWERC 177


>dbj|BAH57026.1| AT5G30510 [Arabidopsis thaliana]
          Length = 378

 Score =  193 bits (491), Expect = 1e-47
 Identities = 92/114 (80%), Positives = 104/114 (91%)
 Frame = -3

Query: 343 YERCRTAPYEGVAFTVDDFHAAIEKYDYNSEIGTKVKGTVFNIDANGALVDVTAKSSAFL 164
           YERCRT+P EGVAFTVDDF AAIE+YD+NSEIGT+VKGTVF  DANGALVD++AKSSA+L
Sbjct: 67  YERCRTSPMEGVAFTVDDFAAAIEQYDFNSEIGTRVKGTVFKTDANGALVDISAKSSAYL 126

Query: 163 PIREACIHGIKHVEEAGIVPGVREEFVIIGENEHDDSLILSLRQIQYDLAWERC 2
            + +ACIH IKHVEEAGIVPG+ EEFVIIGENE DDSL+LSLR IQY+LAWERC
Sbjct: 127 SVEQACIHRIKHVEEAGIVPGMVEEFVIIGENESDDSLLLSLRNIQYELAWERC 180


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