BLASTX nr result

ID: Atractylodes21_contig00002719 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00002719
         (915 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002306300.1| predicted protein [Populus trichocarpa] gi|2...   315   9e-84
ref|XP_002531675.1| poly-A binding protein, putative [Ricinus co...   312   6e-83
ref|XP_002309968.1| predicted protein [Populus trichocarpa] gi|2...   303   3e-80
ref|XP_002866661.1| polyadenylate-binding protein family protein...   301   1e-79
ref|NP_201329.1| RNA recognition motif-containing protein [Arabi...   298   1e-78

>ref|XP_002306300.1| predicted protein [Populus trichocarpa] gi|222855749|gb|EEE93296.1|
           predicted protein [Populus trichocarpa]
          Length = 218

 Score =  315 bits (807), Expect = 9e-84
 Identities = 161/209 (77%), Positives = 168/209 (80%)
 Frame = -1

Query: 867 MEEEEHEVYGGDIPDVGEMEGDGDPHHADVEMATADDDAVKXXXXXXXXXXXXXXXXXXX 688
           MEEEEHEVYGG+IPDV   EGD DPH+ADV+M+ ADDDAVK                   
Sbjct: 1   MEEEEHEVYGGEIPDV---EGDMDPHNADVDMSAADDDAVKELDEMKKRLKEMEEEAAAL 57

Query: 687 XXMQAKVEKEMGAVQDPXXXXXXXXSREEVDTRSIFVGNVDYACTPEEVQQHFQSCGTVN 508
             MQAKVEKEMGAVQDP        +REE D+RS+FVGNVDYACTPEEVQQHFQSCGTVN
Sbjct: 58  REMQAKVEKEMGAVQDPATAAANQANREEADSRSVFVGNVDYACTPEEVQQHFQSCGTVN 117

Query: 507 RVTILTDKFGQPKGFAYVEFLEVEAVQEALALNESELHGRQLKVMAKRTNVPGMKQYRGR 328
           RVTILTDKFGQPKGFAYVEFLEVEAVQEALALNESELHGRQLKV  KRTNVPGMKQYR R
Sbjct: 118 RVTILTDKFGQPKGFAYVEFLEVEAVQEALALNESELHGRQLKVSPKRTNVPGMKQYRPR 177

Query: 327 RFNPYMGYRGFRRPYVPPYFYSPYGYGKV 241
           R NPYMGYR FRRPY PPYFYSPYGYGKV
Sbjct: 178 RINPYMGYR-FRRPYAPPYFYSPYGYGKV 205


>ref|XP_002531675.1| poly-A binding protein, putative [Ricinus communis]
           gi|223528706|gb|EEF30719.1| poly-A binding protein,
           putative [Ricinus communis]
          Length = 218

 Score =  312 bits (800), Expect = 6e-83
 Identities = 157/208 (75%), Positives = 168/208 (80%)
 Frame = -1

Query: 867 MEEEEHEVYGGDIPDVGEMEGDGDPHHADVEMATADDDAVKXXXXXXXXXXXXXXXXXXX 688
           MEEEEHEVYGG+IPD   MEGD DPH+ D++M+ ADDDAVK                   
Sbjct: 1   MEEEEHEVYGGEIPD---MEGDIDPHNVDMDMSAADDDAVKELDEMKKRLKEMEEEAAAL 57

Query: 687 XXMQAKVEKEMGAVQDPXXXXXXXXSREEVDTRSIFVGNVDYACTPEEVQQHFQSCGTVN 508
             MQAKVEKEMGAVQDP        ++EE D+RS+FVGNVDYACTPEEVQQHFQSCGTVN
Sbjct: 58  REMQAKVEKEMGAVQDPASAAANQANKEETDSRSVFVGNVDYACTPEEVQQHFQSCGTVN 117

Query: 507 RVTILTDKFGQPKGFAYVEFLEVEAVQEALALNESELHGRQLKVMAKRTNVPGMKQYRGR 328
           RVTILTDKFGQPKGFAYVEFLEVEA+QEAL LNESELHGRQLKV+ KRTNVPGMKQYR R
Sbjct: 118 RVTILTDKFGQPKGFAYVEFLEVEAIQEALLLNESELHGRQLKVLPKRTNVPGMKQYRPR 177

Query: 327 RFNPYMGYRGFRRPYVPPYFYSPYGYGK 244
           RFNPYMGYR FRRPYVPPYFYSPYGYGK
Sbjct: 178 RFNPYMGYR-FRRPYVPPYFYSPYGYGK 204


>ref|XP_002309968.1| predicted protein [Populus trichocarpa] gi|222852871|gb|EEE90418.1|
           predicted protein [Populus trichocarpa]
          Length = 218

 Score =  303 bits (777), Expect = 3e-80
 Identities = 155/209 (74%), Positives = 165/209 (78%)
 Frame = -1

Query: 867 MEEEEHEVYGGDIPDVGEMEGDGDPHHADVEMATADDDAVKXXXXXXXXXXXXXXXXXXX 688
           MEEEEHEVYGG+IPDV   EGD DPH+ADV+M+ A+DDAVK                   
Sbjct: 1   MEEEEHEVYGGEIPDV---EGDMDPHNADVDMSAAEDDAVKELDEMKKRLKEMEEEAAAL 57

Query: 687 XXMQAKVEKEMGAVQDPXXXXXXXXSREEVDTRSIFVGNVDYACTPEEVQQHFQSCGTVN 508
             MQAKVEKEMGAV DP        ++EE D+RS+FVGNVDYACTPEEVQQHFQSCGTVN
Sbjct: 58  REMQAKVEKEMGAVPDPASAAANQANKEEADSRSVFVGNVDYACTPEEVQQHFQSCGTVN 117

Query: 507 RVTILTDKFGQPKGFAYVEFLEVEAVQEALALNESELHGRQLKVMAKRTNVPGMKQYRGR 328
           RVTILTDKFGQPKGFAYVEF+EVEAVQEALALNESELHGRQLKV  KRTNVPGMKQY  R
Sbjct: 118 RVTILTDKFGQPKGFAYVEFVEVEAVQEALALNESELHGRQLKVSPKRTNVPGMKQYHPR 177

Query: 327 RFNPYMGYRGFRRPYVPPYFYSPYGYGKV 241
            FNPYMG R FRRPY PPYFYSPYGYGKV
Sbjct: 178 SFNPYMGNR-FRRPYAPPYFYSPYGYGKV 205


>ref|XP_002866661.1| polyadenylate-binding protein family protein [Arabidopsis lyrata
           subsp. lyrata] gi|297312496|gb|EFH42920.1|
           polyadenylate-binding protein family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 220

 Score =  301 bits (771), Expect = 1e-79
 Identities = 151/208 (72%), Positives = 167/208 (80%)
 Frame = -1

Query: 867 MEEEEHEVYGGDIPDVGEMEGDGDPHHADVEMATADDDAVKXXXXXXXXXXXXXXXXXXX 688
           MEEEEHEVYGG+IPDVGEM+GD +  + D++MA ADDDAVK                   
Sbjct: 1   MEEEEHEVYGGEIPDVGEMDGDMEALNPDLDMAAADDDAVKELDEMKKRLKEMEDEAAAL 60

Query: 687 XXMQAKVEKEMGAVQDPXXXXXXXXSREEVDTRSIFVGNVDYACTPEEVQQHFQSCGTVN 508
             MQAKVEKEMGA QDP         +EEVD RS+FVGNVDYACTPEEVQQHFQ+CGTV+
Sbjct: 61  REMQAKVEKEMGA-QDPASIAANQAGKEEVDARSVFVGNVDYACTPEEVQQHFQTCGTVH 119

Query: 507 RVTILTDKFGQPKGFAYVEFLEVEAVQEALALNESELHGRQLKVMAKRTNVPGMKQYRGR 328
           RVTILTDKFGQPKGFAYVEF+EVEAVQEAL LNESELHGRQLKV+ KRTNVPG+KQ+RGR
Sbjct: 120 RVTILTDKFGQPKGFAYVEFVEVEAVQEALQLNESELHGRQLKVLQKRTNVPGLKQFRGR 179

Query: 327 RFNPYMGYRGFRRPYVPPYFYSPYGYGK 244
           RFNPYMGYR FRRP++PPY YSPYGYGK
Sbjct: 180 RFNPYMGYR-FRRPFMPPYMYSPYGYGK 206


>ref|NP_201329.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
           gi|14423494|gb|AAK62429.1|AF386984_1 poly(A)-binding
           protein II-like [Arabidopsis thaliana]
           gi|10178188|dbj|BAB11662.1| poly(A)-binding protein
           II-like [Arabidopsis thaliana]
           gi|23197620|gb|AAN15337.1| poly(A)-binding protein
           II-like [Arabidopsis thaliana]
           gi|332010647|gb|AED98030.1| RNA recognition
           motif-containing protein [Arabidopsis thaliana]
          Length = 220

 Score =  298 bits (763), Expect = 1e-78
 Identities = 150/208 (72%), Positives = 166/208 (79%)
 Frame = -1

Query: 867 MEEEEHEVYGGDIPDVGEMEGDGDPHHADVEMATADDDAVKXXXXXXXXXXXXXXXXXXX 688
           MEEEEHEVYGG+IPDVGEM+GD +  + D++MA ADDDAVK                   
Sbjct: 1   MEEEEHEVYGGEIPDVGEMDGDMEALNPDLDMAAADDDAVKELDEMKKRLKEMEDEAAAL 60

Query: 687 XXMQAKVEKEMGAVQDPXXXXXXXXSREEVDTRSIFVGNVDYACTPEEVQQHFQSCGTVN 508
             MQAKVEKEMGA QDP         +EEVD RS+FVGNVDYACTPEEVQQHFQ+CGTV+
Sbjct: 61  REMQAKVEKEMGA-QDPASIAANQAGKEEVDARSVFVGNVDYACTPEEVQQHFQTCGTVH 119

Query: 507 RVTILTDKFGQPKGFAYVEFLEVEAVQEALALNESELHGRQLKVMAKRTNVPGMKQYRGR 328
           RVTILTDKFGQPKGFAYVEF+EVEAVQEAL LNESELHGRQLKV+ KRTNVPG+KQ+RGR
Sbjct: 120 RVTILTDKFGQPKGFAYVEFVEVEAVQEALQLNESELHGRQLKVLQKRTNVPGLKQFRGR 179

Query: 327 RFNPYMGYRGFRRPYVPPYFYSPYGYGK 244
           RFNPYMGYR FRRP++ PY YSPYGYGK
Sbjct: 180 RFNPYMGYR-FRRPFMSPYMYSPYGYGK 206


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