BLASTX nr result

ID: Atractylodes21_contig00002682 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00002682
         (1246 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002531713.1| ubiquitin conjugating enzyme, putative [Rici...   271   3e-70
ref|XP_003541847.1| PREDICTED: uncharacterized protein LOC100810...   271   3e-70
ref|XP_003539595.1| PREDICTED: probable ubiquitin-conjugating en...   268   2e-69
ref|XP_002882934.1| ubiquitin-conjugating enzyme 23 [Arabidopsis...   266   1e-68
ref|XP_002317497.1| predicted protein [Populus trichocarpa] gi|2...   265   1e-68

>ref|XP_002531713.1| ubiquitin conjugating enzyme, putative [Ricinus communis]
           gi|223528656|gb|EEF30672.1| ubiquitin conjugating
           enzyme, putative [Ricinus communis]
          Length = 647

 Score =  271 bits (693), Expect = 3e-70
 Identities = 124/163 (76%), Positives = 143/163 (87%), Gaps = 1/163 (0%)
 Frame = -3

Query: 488 MARLDNEDVLKKYESFKKFDTVLDHSDHHYLKQNSATK-PPKNWAKKIQEEWRILEKDLP 312
           +  ++ +D+L KY++FK+FDTV DHSDHHY  + S+ K PPKNWAKKIQEEWRILE DLP
Sbjct: 347 LKHVNEDDILSKYQNFKRFDTVEDHSDHHYASKGSSVKQPPKNWAKKIQEEWRILENDLP 406

Query: 311 DTIFVRVYESRMDLLRAVIIGAEGTPYHDGLFFFDVCFPSNYPDVPPLVHYHSGGLRINP 132
           D IFVR+YESRMDLLRAVIIGAEGTPYHDGLFFFDV FPS YP++PP V+YHSGGLR+NP
Sbjct: 407 DGIFVRIYESRMDLLRAVIIGAEGTPYHDGLFFFDVFFPSGYPNIPPNVYYHSGGLRLNP 466

Query: 131 NLYNCGKVCLSLLNTWTGGRNERWVPGHSTMLQVLVSIQGLIL 3
           NLYNCGKVCLSLL TW G +NE+W+PG ST+LQVLVSIQ LIL
Sbjct: 467 NLYNCGKVCLSLLGTWHGNKNEKWLPGVSTVLQVLVSIQALIL 509



 Score = 60.1 bits (144), Expect = 1e-06
 Identities = 31/76 (40%), Positives = 43/76 (56%), Gaps = 7/76 (9%)
 Frame = -3

Query: 1214 LGHSLRSFAPGSNNFFDLDGVGSD-------SYTTDVYADEDDYATLQSHFDNIDLPSGI 1056
            L +  +   PGS     +DG  SD         T+D + D D+YA LQ+HFDN+D+P G+
Sbjct: 75   LPYPSKGSGPGSQKTVIVDGSNSDMLDNECIDITSDDFMDFDEYAYLQAHFDNVDIPPGV 134

Query: 1055 EAPIPWLPDTLKMKKR 1008
            E PIP L D+L   K+
Sbjct: 135  EVPIPCLLDSLHKTKK 150


>ref|XP_003541847.1| PREDICTED: uncharacterized protein LOC100810772 [Glycine max]
          Length = 733

 Score =  271 bits (692), Expect = 3e-70
 Identities = 127/157 (80%), Positives = 143/157 (91%), Gaps = 1/157 (0%)
 Frame = -3

Query: 470 EDVLKKYESFKKFDTVLDHSDHHYLKQNSAT-KPPKNWAKKIQEEWRILEKDLPDTIFVR 294
           E++L+K +SFK+FDTV D SDHH+ + NS+  +PPKNWAKKIQEEWRILEKDLP +IFVR
Sbjct: 433 EEILRKLQSFKQFDTVEDTSDHHFFRSNSSMHQPPKNWAKKIQEEWRILEKDLPASIFVR 492

Query: 293 VYESRMDLLRAVIIGAEGTPYHDGLFFFDVCFPSNYPDVPPLVHYHSGGLRINPNLYNCG 114
           VYESRMDLLRAVIIGAEGTPYHDGLFFFDV FPS YP+VPP VHYHSGGLR+NPNLY CG
Sbjct: 493 VYESRMDLLRAVIIGAEGTPYHDGLFFFDVFFPSAYPNVPPKVHYHSGGLRLNPNLYACG 552

Query: 113 KVCLSLLNTWTGGRNERWVPGHSTMLQVLVSIQGLIL 3
           KVCLSLLNTW+G +NE+WVPG ST+LQVLVSIQGLIL
Sbjct: 553 KVCLSLLNTWSGSKNEKWVPGMSTILQVLVSIQGLIL 589



 Score = 65.1 bits (157), Expect = 4e-08
 Identities = 35/79 (44%), Positives = 44/79 (55%), Gaps = 9/79 (11%)
 Frame = -3

Query: 1205 SLRSFAPGSNNFFDLDGVGSD-SYTTDVYAD--------EDDYATLQSHFDNIDLPSGIE 1053
            S  +F   SNN  ++DG GSD SY  D Y D         D+YA LQ HFDN+D+P GIE
Sbjct: 116  SSNNFPSVSNNMINIDGHGSDQSYDDDDYIDILSEDYMDVDEYALLQKHFDNVDIPPGIE 175

Query: 1052 APIPWLPDTLKMKKRASAN 996
            AP  WLP    +  + + N
Sbjct: 176  APFTWLPPDYVVGSKKTEN 194


>ref|XP_003539595.1| PREDICTED: probable ubiquitin-conjugating enzyme E2 25-like
           [Glycine max]
          Length = 695

 Score =  268 bits (685), Expect = 2e-69
 Identities = 125/157 (79%), Positives = 143/157 (91%), Gaps = 1/157 (0%)
 Frame = -3

Query: 470 EDVLKKYESFKKFDTVLDHSDHHYLKQNSAT-KPPKNWAKKIQEEWRILEKDLPDTIFVR 294
           E++L+K+ SFK+FDTV D SDHH+ + NS+  +PPKNWAKKIQEEWRILEKDLP +IFVR
Sbjct: 395 EEILRKFRSFKQFDTVEDISDHHFFRSNSSMHQPPKNWAKKIQEEWRILEKDLPASIFVR 454

Query: 293 VYESRMDLLRAVIIGAEGTPYHDGLFFFDVCFPSNYPDVPPLVHYHSGGLRINPNLYNCG 114
           V+ESRMDLLRAVIIGAEGTPYHDGLFFFDV FPS YP+VPP VHYHSGGLR+NPNLY CG
Sbjct: 455 VFESRMDLLRAVIIGAEGTPYHDGLFFFDVFFPSAYPNVPPKVHYHSGGLRLNPNLYACG 514

Query: 113 KVCLSLLNTWTGGRNERWVPGHSTMLQVLVSIQGLIL 3
           KVCLSLLNTW+G +NE+W+PG ST+LQVLVSIQGLIL
Sbjct: 515 KVCLSLLNTWSGSKNEKWLPGVSTILQVLVSIQGLIL 551



 Score = 67.0 bits (162), Expect = 9e-09
 Identities = 39/86 (45%), Positives = 48/86 (55%), Gaps = 10/86 (11%)
 Frame = -3

Query: 1205 SLRSFAPGSNNFFDLDGVGSD-SYTTDVY--------ADEDDYATLQSHFDNIDLPSGIE 1053
            S  +F   SNN  ++DG GSD SY  D Y         D D+YA LQ HFDN+D+P+GIE
Sbjct: 88   SSNNFPSVSNNLINIDGHGSDLSYDDDDYFDILSEDYMDVDEYALLQKHFDNVDIPTGIE 147

Query: 1052 APIPWL-PDTLKMKKRASANQLATSH 978
            AP  WL PD +   K+   N L   H
Sbjct: 148  APFTWLPPDYVVGSKKTGNNTLYPWH 173


>ref|XP_002882934.1| ubiquitin-conjugating enzyme 23 [Arabidopsis lyrata subsp. lyrata]
            gi|297328774|gb|EFH59193.1| ubiquitin-conjugating enzyme
            23 [Arabidopsis lyrata subsp. lyrata]
          Length = 605

 Score =  266 bits (679), Expect = 1e-68
 Identities = 172/420 (40%), Positives = 225/420 (53%), Gaps = 24/420 (5%)
 Frame = -3

Query: 1190 APGSNNFFDLDGV-------GSDSYTTDVYADEDDYATLQSHFDNIDLPSGIEAPIPWLP 1032
            +P SN+  D D +        S+ Y  ++  + D+Y+  Q  FD  D+P+G+E  + W P
Sbjct: 79   SPISNSLLDPDTLIYEDDENYSEQYDFEMEEETDNYSMYQDLFDGKDIPTGVEVSMDWFP 138

Query: 1031 DTLKMKKRASANQLATSHTQLEVSHPHMVDPLWAAACLARXXXXXXXXXXXXXXSGLQTQ 852
            ++     + SA+  + S  + +V+                              SG+Q+Q
Sbjct: 139  NSAD---KESASGSSKSSNKSDVT--------------------GNSSKKATKGSGIQSQ 175

Query: 851  SNPKNVLSVETPPTIQHQNVPSYCTYDQLGGMRVPGTAY------------FXXXXXXXX 708
             +  ++ +    P  Q  N   +    + GG+ +P +AY            F        
Sbjct: 176  FSFPDMAT----PIAQPWNALPH----KAGGV-IPNSAYALPQNSKAFQPPFTLGSSTSK 226

Query: 707  XXXXXXXXSQLPMDTTYPLGVDAPIPKWQKSIMKIHLEMN----KGYSGIYPTEDMLVDQ 540
                     Q P DT   LG +AP P    S + + +  N    KGY   Y  E+ ++  
Sbjct: 227  TYFSNHFQPQTP-DTV--LG-EAPAPAAGSSGLLLQVPPNTPGFKGYGARYRVEEAILPP 282

Query: 539  DAGNFRRXXXXXXXXXSMARLDNEDVLKKYESFKKFDTVLDHSDHHYL-KQNSATKPPKN 363
            DA   +R              + ED L  Y  FK+FD V D SDHHY  K NS+ +  K 
Sbjct: 283  DASRVKR--------------NMEDFLGLYLFFKRFDIVEDFSDHHYASKGNSSKQHSKE 328

Query: 362  WAKKIQEEWRILEKDLPDTIFVRVYESRMDLLRAVIIGAEGTPYHDGLFFFDVCFPSNYP 183
            WAK+IQ+EW+ILEKDLPD IFVR YESRMDLLRAVIIGA+GTPYHDGLFFFD+ FP  YP
Sbjct: 329  WAKRIQDEWKILEKDLPDMIFVRAYESRMDLLRAVIIGAQGTPYHDGLFFFDIFFPDTYP 388

Query: 182  DVPPLVHYHSGGLRINPNLYNCGKVCLSLLNTWTGGRNERWVPGHSTMLQVLVSIQGLIL 3
             VPP VHYHSGGLRINPNLYNCGKVCLSLL TW+G + E+W+P  STMLQVLVSIQGLIL
Sbjct: 389  SVPPTVHYHSGGLRINPNLYNCGKVCLSLLGTWSGSQREKWIPNTSTMLQVLVSIQGLIL 448


>ref|XP_002317497.1| predicted protein [Populus trichocarpa] gi|222860562|gb|EEE98109.1|
           predicted protein [Populus trichocarpa]
          Length = 480

 Score =  265 bits (678), Expect = 1e-68
 Identities = 122/163 (74%), Positives = 141/163 (86%), Gaps = 1/163 (0%)
 Frame = -3

Query: 488 MARLDNEDVLKKYESFKKFDTVLDHSDHHYLKQNSATK-PPKNWAKKIQEEWRILEKDLP 312
           +  ++ +D+L+K++ FK+FDTV DHSDHHY  + S  K PPK WAK+IQEEWRILE DLP
Sbjct: 181 LKNVNKDDILRKFQLFKRFDTVEDHSDHHYTSKGSLMKQPPKTWAKRIQEEWRILENDLP 240

Query: 311 DTIFVRVYESRMDLLRAVIIGAEGTPYHDGLFFFDVCFPSNYPDVPPLVHYHSGGLRINP 132
           D+IFVRVYE+RMDLLRAVIIGAEGTPYHDGLFFFDV FP+ YP VPPLV+YHSGGLR+NP
Sbjct: 241 DSIFVRVYETRMDLLRAVIIGAEGTPYHDGLFFFDVFFPAGYPKVPPLVYYHSGGLRLNP 300

Query: 131 NLYNCGKVCLSLLNTWTGGRNERWVPGHSTMLQVLVSIQGLIL 3
           NLYNCGKVCLSLL TW G +NE+W PG ST+LQVLVSIQ LIL
Sbjct: 301 NLYNCGKVCLSLLGTWQGNKNEKWQPGVSTVLQVLVSIQALIL 343


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