BLASTX nr result

ID: Atractylodes21_contig00002560 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00002560
         (545 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAP72956.1| putative MDR-like P-glycoprotein [Lactuca sativa]      248   4e-64
gb|ABX82929.1| LO4 [Solanum pennellii]                                228   4e-58
ref|NP_001234209.1| L04 [Solanum lycopersicum] gi|162280535|gb|A...   228   4e-58
gb|AAN28720.2| MDR-like p-glycoprotein [Arabidopsis thaliana]         223   1e-56
ref|NP_189528.1| ABC transporter B family member 19 [Arabidopsis...   223   1e-56

>gb|AAP72956.1| putative MDR-like P-glycoprotein [Lactuca sativa]
          Length = 1251

 Score =  248 bits (633), Expect = 4e-64
 Identities = 118/134 (88%), Positives = 128/134 (95%)
 Frame = +1

Query: 142 SKMSETGKAMPAQAEKNKEQSLPFYRLFSFADKFDYLLMILGSIGAIIHGSSMPFFFLLF 321
           ++ +E  KAMPAQAEK KEQS+PFY+LFSFADKFDY LMILGSIGAIIHGSSMPFFFLLF
Sbjct: 2   AETTEASKAMPAQAEKRKEQSIPFYQLFSFADKFDYALMILGSIGAIIHGSSMPFFFLLF 61

Query: 322 GQMVNGFGKNQSNLSTMTHEVSKYALYFVYLGLVVCVSSYAEIGCWMYTGERQVSALRKK 501
           GQM+NGFGKNQS+L+TMTHEVSKYALYFVYLGLVVC+SSYAEIGCWMYTGERQVS LRK+
Sbjct: 62  GQMINGFGKNQSDLNTMTHEVSKYALYFVYLGLVVCISSYAEIGCWMYTGERQVSTLRKR 121

Query: 502 YLEAVLKQDVGFYD 543
           YLEAVLKQDVGFYD
Sbjct: 122 YLEAVLKQDVGFYD 135


>gb|ABX82929.1| LO4 [Solanum pennellii]
          Length = 1249

 Score =  228 bits (582), Expect = 4e-58
 Identities = 113/134 (84%), Positives = 123/134 (91%), Gaps = 2/134 (1%)
 Frame = +1

Query: 148 MSET--GKAMPAQAEKNKEQSLPFYRLFSFADKFDYLLMILGSIGAIIHGSSMPFFFLLF 321
           M+ET  GK+MP +AEK KEQSLPFY+LFSFADK+DYLLM  GSIGAI+HGSSMP FFLLF
Sbjct: 1   MAETTEGKSMP-EAEKKKEQSLPFYQLFSFADKYDYLLMTCGSIGAILHGSSMPVFFLLF 59

Query: 322 GQMVNGFGKNQSNLSTMTHEVSKYALYFVYLGLVVCVSSYAEIGCWMYTGERQVSALRKK 501
           G+MVNGFGKNQ +L  MTHEVSKYALYFVYLGL+VC SSYAEIGCWMYTGERQVSALRKK
Sbjct: 60  GEMVNGFGKNQMDLHKMTHEVSKYALYFVYLGLIVCASSYAEIGCWMYTGERQVSALRKK 119

Query: 502 YLEAVLKQDVGFYD 543
           YLEAVLKQDVGF+D
Sbjct: 120 YLEAVLKQDVGFFD 133


>ref|NP_001234209.1| L04 [Solanum lycopersicum] gi|162280535|gb|ABX82928.1| L04 [Solanum
           lycopersicum]
          Length = 1249

 Score =  228 bits (582), Expect = 4e-58
 Identities = 113/134 (84%), Positives = 123/134 (91%), Gaps = 2/134 (1%)
 Frame = +1

Query: 148 MSET--GKAMPAQAEKNKEQSLPFYRLFSFADKFDYLLMILGSIGAIIHGSSMPFFFLLF 321
           M+ET  GK+MP +AEK KEQSLPFY+LFSFADK+DYLLM  GSIGAI+HGSSMP FFLLF
Sbjct: 1   MAETTEGKSMP-EAEKKKEQSLPFYQLFSFADKYDYLLMTCGSIGAILHGSSMPVFFLLF 59

Query: 322 GQMVNGFGKNQSNLSTMTHEVSKYALYFVYLGLVVCVSSYAEIGCWMYTGERQVSALRKK 501
           G+MVNGFGKNQ +L  MTHEVSKYALYFVYLGL+VC SSYAEIGCWMYTGERQVSALRKK
Sbjct: 60  GEMVNGFGKNQMDLHKMTHEVSKYALYFVYLGLIVCASSYAEIGCWMYTGERQVSALRKK 119

Query: 502 YLEAVLKQDVGFYD 543
           YLEAVLKQDVGF+D
Sbjct: 120 YLEAVLKQDVGFFD 133


>gb|AAN28720.2| MDR-like p-glycoprotein [Arabidopsis thaliana]
          Length = 1252

 Score =  223 bits (569), Expect = 1e-56
 Identities = 108/136 (79%), Positives = 121/136 (88%), Gaps = 4/136 (2%)
 Frame = +1

Query: 148 MSETG----KAMPAQAEKNKEQSLPFYRLFSFADKFDYLLMILGSIGAIIHGSSMPFFFL 315
           MSET     K +PA+AEK KEQSLPF++LFSFADKFDYLLM +GS+GAI+HGSSMP FFL
Sbjct: 1   MSETNTTDAKTVPAEAEKKKEQSLPFFKLFSFADKFDYLLMFVGSLGAIVHGSSMPVFFL 60

Query: 316 LFGQMVNGFGKNQSNLSTMTHEVSKYALYFVYLGLVVCVSSYAEIGCWMYTGERQVSALR 495
           LFGQMVNGFGKNQ +L  M HEVS+Y+LYFVYLGLVVC SSYAEI CWMY+GERQV+ALR
Sbjct: 61  LFGQMVNGFGKNQMDLHQMVHEVSRYSLYFVYLGLVVCFSSYAEIACWMYSGERQVAALR 120

Query: 496 KKYLEAVLKQDVGFYD 543
           KKYLEAVLKQDVGF+D
Sbjct: 121 KKYLEAVLKQDVGFFD 136


>ref|NP_189528.1| ABC transporter B family member 19 [Arabidopsis thaliana]
           gi|75335092|sp|Q9LJX0.1|AB19B_ARATH RecName: Full=ABC
           transporter B family member 19; Short=ABC transporter
           ABCB.19; Short=AtABCB19; AltName: Full=Multidrug
           resistance protein 11; AltName: Full=P-glycoprotein 19
           gi|9294227|dbj|BAB02129.1| P-glycoprotein; multi-drug
           resistance related; ABC transporter-like protein
           [Arabidopsis thaliana] gi|332643977|gb|AEE77498.1| ABC
           transporter B family member 19 [Arabidopsis thaliana]
          Length = 1252

 Score =  223 bits (569), Expect = 1e-56
 Identities = 108/136 (79%), Positives = 121/136 (88%), Gaps = 4/136 (2%)
 Frame = +1

Query: 148 MSETG----KAMPAQAEKNKEQSLPFYRLFSFADKFDYLLMILGSIGAIIHGSSMPFFFL 315
           MSET     K +PA+AEK KEQSLPF++LFSFADKFDYLLM +GS+GAI+HGSSMP FFL
Sbjct: 1   MSETNTTDAKTVPAEAEKKKEQSLPFFKLFSFADKFDYLLMFVGSLGAIVHGSSMPVFFL 60

Query: 316 LFGQMVNGFGKNQSNLSTMTHEVSKYALYFVYLGLVVCVSSYAEIGCWMYTGERQVSALR 495
           LFGQMVNGFGKNQ +L  M HEVS+Y+LYFVYLGLVVC SSYAEI CWMY+GERQV+ALR
Sbjct: 61  LFGQMVNGFGKNQMDLHQMVHEVSRYSLYFVYLGLVVCFSSYAEIACWMYSGERQVAALR 120

Query: 496 KKYLEAVLKQDVGFYD 543
           KKYLEAVLKQDVGF+D
Sbjct: 121 KKYLEAVLKQDVGFFD 136


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