BLASTX nr result

ID: Atractylodes21_contig00002553 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00002553
         (1143 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003547685.1| PREDICTED: succinate dehydrogenase [ubiquino...   475   e-132
ref|XP_003553891.1| PREDICTED: succinate dehydrogenase [ubiquino...   473   e-131
gb|ADN34136.1| succinate dehydrogenase [Cucumis melo subsp. melo]     472   e-131
ref|NP_001234860.1| mitochondrial succinate dehydrogenase iron s...   471   e-130
ref|XP_004145686.1| PREDICTED: succinate dehydrogenase [ubiquino...   469   e-130

>ref|XP_003547685.1| PREDICTED: succinate dehydrogenase [ubiquinone] iron-sulfur subunit
           2, mitochondrial-like [Glycine max]
          Length = 279

 Score =  475 bits (1223), Expect = e-132
 Identities = 230/279 (82%), Positives = 243/279 (87%), Gaps = 3/279 (1%)
 Frame = +1

Query: 58  MATGXXXXXXXXXXXXPAAKLFLSRAHASEPQAQQVEPVARSTHNLKNFQIYRWNPDNPS 237
           MATG            PA KL + RAHASE QAQQVEP AR T  LK FQIYRWNP+NPS
Sbjct: 1   MATGLLKRAAQRVPSSPAFKLAILRAHASEAQAQQVEPKARETPTLKTFQIYRWNPENPS 60

Query: 238 KPELQNYQIDLKECGPMVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGCNGLACL 417
           KPEL++YQI+LKECGPMVLDALIKIKNEIDP+LTFRRSCREGICGSCAMNIDGCNGLACL
Sbjct: 61  KPELKDYQINLKECGPMVLDALIKIKNEIDPSLTFRRSCREGICGSCAMNIDGCNGLACL 120

Query: 418 TKIPT---ADATMITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSPAPSGWEGKEVP 588
           TKIP+   + AT ITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRK+P   G   KE+ 
Sbjct: 121 TKIPSEKNSAATTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKNPPVPG---KEIL 177

Query: 589 QSKKDRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWIMDSRDEYTKERL 768
           QSKK+R KLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWI DSRDEYTKERL
Sbjct: 178 QSKKEREKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERL 237

Query: 769 DAVNDEFKLYRCHTILNCARACPKGLNPGKQIQNIKSLQ 885
           DA+NDEFKLYRCHTILNCARACPKGLNPGKQI +IKSLQ
Sbjct: 238 DAINDEFKLYRCHTILNCARACPKGLNPGKQISHIKSLQ 276


>ref|XP_003553891.1| PREDICTED: succinate dehydrogenase [ubiquinone] iron-sulfur subunit
           2, mitochondrial-like [Glycine max]
          Length = 277

 Score =  473 bits (1218), Expect = e-131
 Identities = 229/277 (82%), Positives = 241/277 (87%), Gaps = 1/277 (0%)
 Frame = +1

Query: 58  MATGXXXXXXXXXXXXPAAKLFLSRAHASEPQAQQVEPVARSTHNLKNFQIYRWNPDNPS 237
           MATG            P  KL L RAHASE QAQQVEP AR T  LK FQIYRW+P+NPS
Sbjct: 1   MATGLLKRAAQRLPSSPGFKLALLRAHASEAQAQQVEPKARGTPTLKTFQIYRWSPENPS 60

Query: 238 KPELQNYQIDLKECGPMVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGCNGLACL 417
           KPEL++YQI+LKECGPMVLDALIKIKNEIDP+LTFRRSCREGICGSCAMNIDGCNGLACL
Sbjct: 61  KPELKDYQINLKECGPMVLDALIKIKNEIDPSLTFRRSCREGICGSCAMNIDGCNGLACL 120

Query: 418 TKIPTADA-TMITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSPAPSGWEGKEVPQS 594
           TKIP+  A T ITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRK+P   G   KE+ QS
Sbjct: 121 TKIPSEGAATTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKNPPEPG---KEILQS 177

Query: 595 KKDRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWIMDSRDEYTKERLDA 774
           KK+R KLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWI DSRDEYTKERLDA
Sbjct: 178 KKEREKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLDA 237

Query: 775 VNDEFKLYRCHTILNCARACPKGLNPGKQIQNIKSLQ 885
           +NDEFKLYRCHTILNCARACPKGLNPGKQI +IKSLQ
Sbjct: 238 INDEFKLYRCHTILNCARACPKGLNPGKQISHIKSLQ 274


>gb|ADN34136.1| succinate dehydrogenase [Cucumis melo subsp. melo]
          Length = 277

 Score =  472 bits (1214), Expect = e-131
 Identities = 225/276 (81%), Positives = 240/276 (86%)
 Frame = +1

Query: 58  MATGXXXXXXXXXXXXPAAKLFLSRAHASEPQAQQVEPVARSTHNLKNFQIYRWNPDNPS 237
           MATG              ++    RAHASE +AQQVE  A ++ NLK F IYRWNPD+PS
Sbjct: 1   MATGILRRVLSRVSASSPSRFVRIRAHASEAEAQQVEQKATASSNLKTFAIYRWNPDSPS 60

Query: 238 KPELQNYQIDLKECGPMVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGCNGLACL 417
           KPELQ Y+IDLKECGPMVLDALIKIKNEIDP+LTFRRSCREGICGSCAMNIDGCNGLACL
Sbjct: 61  KPELQEYKIDLKECGPMVLDALIKIKNEIDPSLTFRRSCREGICGSCAMNIDGCNGLACL 120

Query: 418 TKIPTADATMITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSPAPSGWEGKEVPQSK 597
           TKIP+ D++ ITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKS  P    GKE+ QSK
Sbjct: 121 TKIPSGDSSTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPPV--PGKEILQSK 178

Query: 598 KDRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWIMDSRDEYTKERLDAV 777
           KDRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWI DSRDEYTKERL+A+
Sbjct: 179 KDRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLEAI 238

Query: 778 NDEFKLYRCHTILNCARACPKGLNPGKQIQNIKSLQ 885
           NDEFKLYRCHTILNCARACPKGLNPGKQIQ+IKSLQ
Sbjct: 239 NDEFKLYRCHTILNCARACPKGLNPGKQIQHIKSLQ 274


>ref|NP_001234860.1| mitochondrial succinate dehydrogenase iron sulfur subunit [Solanum
           lycopersicum] gi|270303918|gb|ACZ71182.1| mitochondrial
           succinate dehydrogenase iron sulfur subunit [Solanum
           lycopersicum]
          Length = 274

 Score =  471 bits (1213), Expect = e-130
 Identities = 222/260 (85%), Positives = 238/260 (91%)
 Frame = +1

Query: 106 PAAKLFLSRAHASEPQAQQVEPVARSTHNLKNFQIYRWNPDNPSKPELQNYQIDLKECGP 285
           PAA+L ++RAHAS+ QAQ+VE    S  NLK+FQIYRW PDNP KPEL+ Y+IDLKECGP
Sbjct: 18  PAARLLVARAHASDSQAQKVE----SKPNLKSFQIYRWTPDNPGKPELKEYKIDLKECGP 73

Query: 286 MVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGCNGLACLTKIPTADATMITPLPH 465
           MVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGCNGLACLTKI +   + ITPLPH
Sbjct: 74  MVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGCNGLACLTKISSDSESTITPLPH 133

Query: 466 MFVIKDLVVDMTNFYNQYKSIEPWLKRKSPAPSGWEGKEVPQSKKDRAKLDGMYECILCA 645
           MFVIKDLVVDMTNFYNQYKSIEPWLKRK+PAP+   GKE+PQSK DRAKLDGMYECILCA
Sbjct: 134 MFVIKDLVVDMTNFYNQYKSIEPWLKRKTPAPT--PGKEIPQSKSDRAKLDGMYECILCA 191

Query: 646 CCSTSCPSYWWNPESYLGPAALLHANRWIMDSRDEYTKERLDAVNDEFKLYRCHTILNCA 825
           CCSTSCPSYWWNPESYLGPAALLHANRWIMDSRDEYT+ERLDAVNDEFKLYRCHTILNC+
Sbjct: 192 CCSTSCPSYWWNPESYLGPAALLHANRWIMDSRDEYTQERLDAVNDEFKLYRCHTILNCS 251

Query: 826 RACPKGLNPGKQIQNIKSLQ 885
           RACPKGLNPGK IQNIK L+
Sbjct: 252 RACPKGLNPGKHIQNIKKLE 271


>ref|XP_004145686.1| PREDICTED: succinate dehydrogenase [ubiquinone] iron-sulfur subunit
           2, mitochondrial-like [Cucumis sativus]
           gi|449492901|ref|XP_004159135.1| PREDICTED: succinate
           dehydrogenase [ubiquinone] iron-sulfur subunit 2,
           mitochondrial-like [Cucumis sativus]
          Length = 277

 Score =  469 bits (1207), Expect = e-130
 Identities = 224/276 (81%), Positives = 238/276 (86%)
 Frame = +1

Query: 58  MATGXXXXXXXXXXXXPAAKLFLSRAHASEPQAQQVEPVARSTHNLKNFQIYRWNPDNPS 237
           MATG              ++    RAHASE QAQQV+  A ++ +LK F IYRWNPD+PS
Sbjct: 1   MATGILRRALSRVSASSPSRFLRIRAHASEAQAQQVDQKAAASSHLKTFAIYRWNPDSPS 60

Query: 238 KPELQNYQIDLKECGPMVLDALIKIKNEIDPTLTFRRSCREGICGSCAMNIDGCNGLACL 417
           KPELQ Y+IDLKECGPMVLDALIKIKNEIDP+LTFRRSCREGICGSCAMNIDGCNGLACL
Sbjct: 61  KPELQEYKIDLKECGPMVLDALIKIKNEIDPSLTFRRSCREGICGSCAMNIDGCNGLACL 120

Query: 418 TKIPTADATMITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSPAPSGWEGKEVPQSK 597
           TKI + D++ ITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKS  P    GKE+ QSK
Sbjct: 121 TKISSGDSSTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKSEPPV--PGKEILQSK 178

Query: 598 KDRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWIMDSRDEYTKERLDAV 777
           KDRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWI DSRDEYTKERLDA+
Sbjct: 179 KDRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLDAI 238

Query: 778 NDEFKLYRCHTILNCARACPKGLNPGKQIQNIKSLQ 885
           NDEFKLYRCHTILNCARACPKGLNPGKQIQNIK LQ
Sbjct: 239 NDEFKLYRCHTILNCARACPKGLNPGKQIQNIKGLQ 274


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