BLASTX nr result

ID: Atractylodes21_contig00002495 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00002495
         (1879 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270244.2| PREDICTED: RNA-binding protein 40-like [Viti...   293   8e-77
ref|XP_002525464.1| RNA binding protein, putative [Ricinus commu...   292   2e-76
ref|XP_003632078.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding ...   286   1e-74
emb|CBI36672.3| unnamed protein product [Vitis vinifera]              286   1e-74
ref|XP_003548764.1| PREDICTED: uncharacterized protein LOC100818...   278   4e-72

>ref|XP_002270244.2| PREDICTED: RNA-binding protein 40-like [Vitis vinifera]
           gi|298205172|emb|CBI17231.3| unnamed protein product
           [Vitis vinifera]
          Length = 463

 Score =  293 bits (751), Expect = 8e-77
 Identities = 142/193 (73%), Positives = 165/193 (85%)
 Frame = -1

Query: 916 EAIVGPAIDRDVAHEAVGLKPATLVPKEIPMIKKKNTVLQIKITPKQTQTEQVDDGPSED 737
           EAIVGP +D+DVAHEAVG+KPATLVPKEIPMIKKKN VLQIKI PK     + +    ++
Sbjct: 269 EAIVGPGVDKDVAHEAVGVKPATLVPKEIPMIKKKNPVLQIKIVPKVITEHKDECSIMKE 328

Query: 736 IEELENENLSTKPFATVEELENGKLPPEEILSLPMFKNYNAGNPAPVLYIKNLAKDVVAD 557
            E+ E E+   KP+AT+EEL++GKLPPEEILSLPMFKNY AGNPAPVLYIKNLAKDVV D
Sbjct: 329 SEDSEKEDFDLKPYATLEELKSGKLPPEEILSLPMFKNYTAGNPAPVLYIKNLAKDVVVD 388

Query: 556 DFYFVFGAFFGSIETVKANLSVKLMQEGRMRGQAFVTFPSIDIAHRALNLVNGFVFKGKP 377
           DFYF+FG+ FGS++  K+ LSVKLMQEGRMRGQAFVTFPS+++AH ALNLVNG+VFKGKP
Sbjct: 389 DFYFIFGSLFGSVDAAKSGLSVKLMQEGRMRGQAFVTFPSVELAHHALNLVNGYVFKGKP 448

Query: 376 MIIQFGRNTSAGK 338
           MIIQFGRN +A K
Sbjct: 449 MIIQFGRNPAAAK 461



 Score =  172 bits (436), Expect = 3e-40
 Identities = 90/143 (62%), Positives = 106/143 (74%), Gaps = 3/143 (2%)
 Frame = -1

Query: 1537 NGRFRKNEFVDFSNEGLAIQAYRQLNGLRFLGKVLSVERASTPPHDTRSQQNKPMLGNDA 1358
            +GR R   FVDF +E LA QA RQLNGLRFLGKVL VERA+ P  D + Q+++ + G D 
Sbjct: 54   SGRLRNCAFVDFKSEMLASQALRQLNGLRFLGKVLLVERANKPTEDDK-QKSEALFGKDL 112

Query: 1357 MPSRD---DATLAKDSKQESMTKSLPALEPIAEKLGVEYPFPPHLMYAYPPPDGNILTNI 1187
                    D T+A+D  +   + SLPA EPIA +LG++YPFPPHL YAYPPPDGNILTNI
Sbjct: 113  TKPVSLIKDFTMARDLDEGLKSSSLPASEPIAARLGIDYPFPPHLEYAYPPPDGNILTNI 172

Query: 1186 LNALIAVPRFYTQVLHLMNKMNI 1118
            +NALIAVPRFY QVLHLMNKMNI
Sbjct: 173  VNALIAVPRFYVQVLHLMNKMNI 195


>ref|XP_002525464.1| RNA binding protein, putative [Ricinus communis]
           gi|223535277|gb|EEF36954.1| RNA binding protein,
           putative [Ricinus communis]
          Length = 450

 Score =  292 bits (748), Expect = 2e-76
 Identities = 141/195 (72%), Positives = 166/195 (85%)
 Frame = -1

Query: 916 EAIVGPAIDRDVAHEAVGLKPATLVPKEIPMIKKKNTVLQIKITPKQTQTEQVDDGPSED 737
           EAIVGP +D+DV HEAVGLKP++LVPKEIP+IKKKN VLQIKI PK +QTEQ DD   ++
Sbjct: 256 EAIVGPGVDKDVVHEAVGLKPSSLVPKEIPVIKKKNPVLQIKIAPKVSQTEQTDDISMKE 315

Query: 736 IEELENENLSTKPFATVEELENGKLPPEEILSLPMFKNYNAGNPAPVLYIKNLAKDVVAD 557
            +E + E L  KPFAT EELE+ KL PEEILSLP FKNY  GNPA VLYIKNL+KD+VAD
Sbjct: 316 SDEQDEEGLDHKPFATPEELESNKLAPEEILSLPQFKNYTVGNPASVLYIKNLSKDMVAD 375

Query: 556 DFYFVFGAFFGSIETVKANLSVKLMQEGRMRGQAFVTFPSIDIAHRALNLVNGFVFKGKP 377
           DF+++FG+ FGS++  K  LSVKLMQEGRMRGQAFVTFPS+++AH+ALNLVNG+VFKGKP
Sbjct: 376 DFFYIFGSLFGSLDAAKVGLSVKLMQEGRMRGQAFVTFPSVELAHQALNLVNGYVFKGKP 435

Query: 376 MIIQFGRNTSAGKSN 332
           MIIQFGRN SA K+N
Sbjct: 436 MIIQFGRNPSASKTN 450



 Score =  162 bits (411), Expect = 2e-37
 Identities = 85/142 (59%), Positives = 101/142 (71%), Gaps = 3/142 (2%)
 Frame = -1

Query: 1534 GRFRKNEFVDFSNEGLAIQAYRQLNGLRFLGKVLSVERAST--PPHDTRSQQNKPMLGND 1361
            GR     FVDF NE LA QA RQLNGLRFLGKVL+ E+A+   P  +    Q++  +  D
Sbjct: 43   GRLTNCAFVDFKNEALAYQAQRQLNGLRFLGKVLAAEKANNNKPNENNVLTQSEAQIRKD 102

Query: 1360 -AMPSRDDATLAKDSKQESMTKSLPALEPIAEKLGVEYPFPPHLMYAYPPPDGNILTNIL 1184
              +P+  D   +     +  +KS+PA EPIA +LGV+YPFPPHL Y YPPPDGNILTNI+
Sbjct: 103  HTLPTSVDKDASAMIDTDGRSKSVPASEPIAPRLGVDYPFPPHLEYTYPPPDGNILTNIV 162

Query: 1183 NALIAVPRFYTQVLHLMNKMNI 1118
            NALIAVPRFYTQVLHLMNKMNI
Sbjct: 163  NALIAVPRFYTQVLHLMNKMNI 184


>ref|XP_003632078.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding protein 40-like [Vitis
           vinifera]
          Length = 463

 Score =  286 bits (733), Expect = 1e-74
 Identities = 139/193 (72%), Positives = 163/193 (84%)
 Frame = -1

Query: 916 EAIVGPAIDRDVAHEAVGLKPATLVPKEIPMIKKKNTVLQIKITPKQTQTEQVDDGPSED 737
           EAI GP +D+DVAHEAVG+KPATLVPKEIPMIKKKN VLQIKI PK     + +    ++
Sbjct: 269 EAIAGPGVDKDVAHEAVGVKPATLVPKEIPMIKKKNPVLQIKIAPKVITEHKDECSIMKE 328

Query: 736 IEELENENLSTKPFATVEELENGKLPPEEILSLPMFKNYNAGNPAPVLYIKNLAKDVVAD 557
            E+ E E+   K +AT+EEL++GKLPPEEILSLPMFKNY AGNPAPVLYIKNLAKDVV D
Sbjct: 329 SEDSEKEDFDLKHYATLEELKSGKLPPEEILSLPMFKNYAAGNPAPVLYIKNLAKDVVVD 388

Query: 556 DFYFVFGAFFGSIETVKANLSVKLMQEGRMRGQAFVTFPSIDIAHRALNLVNGFVFKGKP 377
           DFYF+FG+ FGS++  K+ LSVKLMQEGRMRGQAFVTFPS+++AH ALN+VNG+VFKGKP
Sbjct: 389 DFYFIFGSLFGSVDAAKSGLSVKLMQEGRMRGQAFVTFPSVELAHHALNVVNGYVFKGKP 448

Query: 376 MIIQFGRNTSAGK 338
           MIIQFGRN +A K
Sbjct: 449 MIIQFGRNPAAAK 461



 Score =  161 bits (408), Expect = 5e-37
 Identities = 86/143 (60%), Positives = 102/143 (71%), Gaps = 3/143 (2%)
 Frame = -1

Query: 1537 NGRFRKNEFVDFSNEGLAIQAYRQLNGLRFLGKVLSVERASTPPHDTRSQQNKPMLGNDA 1358
            +GR R   FVDF +E LA QA RQLNGLRFLGKVL VERA+ P  D + Q+++ + G D 
Sbjct: 54   SGRLRNCAFVDFKSEMLASQALRQLNGLRFLGKVLLVERANKPTEDDK-QKSEALFGKDL 112

Query: 1357 MPSRD---DATLAKDSKQESMTKSLPALEPIAEKLGVEYPFPPHLMYAYPPPDGNILTNI 1187
                    D T+A+D  +   + SLPA EPIA +LG++YPFPPHL Y    PDGNILTNI
Sbjct: 113  TKPASLIKDFTMARDLGEGLKSSSLPASEPIAARLGIDYPFPPHLEYVXSHPDGNILTNI 172

Query: 1186 LNALIAVPRFYTQVLHLMNKMNI 1118
            +NALIAVPRFY QVLHLMNKMNI
Sbjct: 173  VNALIAVPRFYVQVLHLMNKMNI 195


>emb|CBI36672.3| unnamed protein product [Vitis vinifera]
          Length = 263

 Score =  286 bits (733), Expect = 1e-74
 Identities = 139/193 (72%), Positives = 163/193 (84%)
 Frame = -1

Query: 916 EAIVGPAIDRDVAHEAVGLKPATLVPKEIPMIKKKNTVLQIKITPKQTQTEQVDDGPSED 737
           EAI GP +D+DVAHEAVG+KPATLVPKEIPMIKKKN VLQIKI PK     + +    ++
Sbjct: 69  EAIAGPGVDKDVAHEAVGVKPATLVPKEIPMIKKKNPVLQIKIAPKVITEHKDECSIMKE 128

Query: 736 IEELENENLSTKPFATVEELENGKLPPEEILSLPMFKNYNAGNPAPVLYIKNLAKDVVAD 557
            E+ E E+   K +AT+EEL++GKLPPEEILSLPMFKNY AGNPAPVLYIKNLAKDVV D
Sbjct: 129 SEDSEKEDFDLKHYATLEELKSGKLPPEEILSLPMFKNYAAGNPAPVLYIKNLAKDVVVD 188

Query: 556 DFYFVFGAFFGSIETVKANLSVKLMQEGRMRGQAFVTFPSIDIAHRALNLVNGFVFKGKP 377
           DFYF+FG+ FGS++  K+ LSVKLMQEGRMRGQAFVTFPS+++AH ALN+VNG+VFKGKP
Sbjct: 189 DFYFIFGSLFGSVDAAKSGLSVKLMQEGRMRGQAFVTFPSVELAHHALNVVNGYVFKGKP 248

Query: 376 MIIQFGRNTSAGK 338
           MIIQFGRN +A K
Sbjct: 249 MIIQFGRNPAAAK 261


>ref|XP_003548764.1| PREDICTED: uncharacterized protein LOC100818499 [Glycine max]
          Length = 456

 Score =  278 bits (711), Expect = 4e-72
 Identities = 138/194 (71%), Positives = 160/194 (82%)
 Frame = -1

Query: 916 EAIVGPAIDRDVAHEAVGLKPATLVPKEIPMIKKKNTVLQIKITPKQTQTEQVDDGPSED 737
           E IVGPAID+ VAHE+VG+KPATLVPKEIP+IKK N VL+I I PK T  E  DD  +++
Sbjct: 263 ETIVGPAIDKGVAHESVGVKPATLVPKEIPVIKK-NHVLKINIVPKATVKEHKDDDTTQE 321

Query: 736 IEELENENLSTKPFATVEELENGKLPPEEILSLPMFKNYNAGNPAPVLYIKNLAKDVVAD 557
           ++E E +      F T +ELE GKLPPEEILSLPMFKNY AGNPAPVLYIKNLAKDV+AD
Sbjct: 322 LQEPEKDVPDPNKFFTPDELERGKLPPEEILSLPMFKNYTAGNPAPVLYIKNLAKDVIAD 381

Query: 556 DFYFVFGAFFGSIETVKANLSVKLMQEGRMRGQAFVTFPSIDIAHRALNLVNGFVFKGKP 377
           DFYF+FG+ FGSIE  K+ L VKLMQEGRMRGQAF+TFPSI++AH ALNLVNG+V KGKP
Sbjct: 382 DFYFIFGSLFGSIEAAKSGLQVKLMQEGRMRGQAFITFPSIELAHHALNLVNGYVLKGKP 441

Query: 376 MIIQFGRNTSAGKS 335
           MIIQFGRN +A K+
Sbjct: 442 MIIQFGRNPAAAKA 455



 Score =  162 bits (411), Expect = 2e-37
 Identities = 87/141 (61%), Positives = 100/141 (70%), Gaps = 1/141 (0%)
 Frame = -1

Query: 1537 NGRFRKNEFVDFSNEGLAIQAYRQLNGLRFLGKVLSVERASTPPHDTRSQQNKPMLGNDA 1358
            + R R   F DF NE +A QA RQLNGLRFLGKVLS ERAS P  +   + +   LG D 
Sbjct: 57   SARLRNCAFADFKNEIVASQAQRQLNGLRFLGKVLSAERASNPT-ENGEKSSGDQLGKDP 115

Query: 1357 MPSR-DDATLAKDSKQESMTKSLPALEPIAEKLGVEYPFPPHLMYAYPPPDGNILTNILN 1181
              S   +A + K    ++ +  LP  EPIA++LGV YPFPPHL YAYPPPDGNILTNI+N
Sbjct: 116  KTSMLMNANVTKPIDGDTKSGGLPIPEPIADRLGVNYPFPPHLEYAYPPPDGNILTNIVN 175

Query: 1180 ALIAVPRFYTQVLHLMNKMNI 1118
            ALIAVPRFYTQVLHLMNKMNI
Sbjct: 176  ALIAVPRFYTQVLHLMNKMNI 196


Top