BLASTX nr result

ID: Atractylodes21_contig00002447 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00002447
         (1943 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002304638.1| predicted protein [Populus trichocarpa] gi|2...   401   e-109
ref|XP_002297879.1| predicted protein [Populus trichocarpa] gi|2...   400   e-109
ref|XP_002271311.1| PREDICTED: cytochrome b-c1 complex subunit R...   396   e-108
sp|P49729.1|UCRI1_TOBAC RecName: Full=Cytochrome b-c1 complex su...   395   e-107
ref|XP_002512828.1| ubiquinol-cytochrome C reductase iron-sulfur...   395   e-107

>ref|XP_002304638.1| predicted protein [Populus trichocarpa] gi|222842070|gb|EEE79617.1|
           predicted protein [Populus trichocarpa]
          Length = 272

 Score =  401 bits (1030), Expect = e-109
 Identities = 199/260 (76%), Positives = 220/260 (84%), Gaps = 5/260 (1%)
 Frame = +1

Query: 154 WRHNNPASASIISTNTQIQDAAADYHLRSTHCSPPFNHPFH-QLSRGFASNLITPRFE-- 324
           WR +   SA  +S N+       D    S     P++  F   L RGF+S  +TP  +  
Sbjct: 14  WRCSQTTSA-FVSQNSPFLSDGRDSAASSRSILSPYHLSFTPDLIRGFSSGALTPGQDMG 72

Query: 325 --DKIPATVAAITNPTSKIIYDEHNHERYPPGDPSKRAFAYFVLTGGRFVYASLIRLLVL 498
               +PATVAA+ NPTSKI+YDEHNHERYPPGDPSKRAFAYFVLTGGRFVYASLIRLLVL
Sbjct: 73  IISDLPATVAAVKNPTSKIVYDEHNHERYPPGDPSKRAFAYFVLTGGRFVYASLIRLLVL 132

Query: 499 KFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIRRRTDDDVKLANSVDVSS 678
           KFVLSMSASKDVLA+ASLEVDLSSIEPGSTVTVKWRGKPVFIRRRT+DD+KLANSVDV+S
Sbjct: 133 KFVLSMSASKDVLAMASLEVDLSSIEPGSTVTVKWRGKPVFIRRRTEDDIKLANSVDVAS 192

Query: 679 LRDPQEDAARVKNPEWLIVVGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPA 858
           LRDPQEDAARVK+PEWL+VVGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPA
Sbjct: 193 LRDPQEDAARVKDPEWLVVVGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPA 252

Query: 859 PYNLEVPTYSFMEDNKLLIG 918
           P+NLEVPTYSF+E+NKLL+G
Sbjct: 253 PFNLEVPTYSFLEENKLLVG 272


>ref|XP_002297879.1| predicted protein [Populus trichocarpa] gi|222845137|gb|EEE82684.1|
           predicted protein [Populus trichocarpa]
          Length = 275

 Score =  400 bits (1029), Expect = e-109
 Identities = 200/262 (76%), Positives = 219/262 (83%), Gaps = 7/262 (2%)
 Frame = +1

Query: 154 WRHNNPASAS-IISTNTQ-IQDAAADYHLRSTHCSPPFNHPFH-QLSRGFASNLITPRFE 324
           WR +   + S  +S NT  + D   D    S     P+   F   L RGF+S  +T   +
Sbjct: 14  WRSSQSQTTSAFVSRNTAFVSDDGRDSAASSRPILSPYQFSFPPDLIRGFSSGALTSGHD 73

Query: 325 ----DKIPATVAAITNPTSKIIYDEHNHERYPPGDPSKRAFAYFVLTGGRFVYASLIRLL 492
                 +P TVAA+ NPTSKI+YDEHNHERYPPGDPSKRAFAYFVLTGGRFVYASLIRLL
Sbjct: 74  MGIISDLPPTVAAVKNPTSKIVYDEHNHERYPPGDPSKRAFAYFVLTGGRFVYASLIRLL 133

Query: 493 VLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIRRRTDDDVKLANSVDV 672
           VLKFVLSMSASKDVLA+ASLEVDLSSIEPGSTVTVKWRGKPVFIRRRT+DD+KLANSVD+
Sbjct: 134 VLKFVLSMSASKDVLAMASLEVDLSSIEPGSTVTVKWRGKPVFIRRRTEDDIKLANSVDL 193

Query: 673 SSLRDPQEDAARVKNPEWLIVVGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKG 852
           +SLRDPQEDAARVKNPEWL+VVGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKG
Sbjct: 194 ASLRDPQEDAARVKNPEWLVVVGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKG 253

Query: 853 PAPYNLEVPTYSFMEDNKLLIG 918
           PAPYNLEVPTYSFME+NKLL+G
Sbjct: 254 PAPYNLEVPTYSFMEENKLLVG 275


>ref|XP_002271311.1| PREDICTED: cytochrome b-c1 complex subunit Rieske-2, mitochondrial
           [Vitis vinifera] gi|296085532|emb|CBI29264.3| unnamed
           protein product [Vitis vinifera]
          Length = 272

 Score =  396 bits (1018), Expect = e-108
 Identities = 194/255 (76%), Positives = 218/255 (85%), Gaps = 5/255 (1%)
 Frame = +1

Query: 169 PASASIISTNTQIQDA-AADYHLRSTHCSPPFNHPFHQLSRGFASNLITPRFE----DKI 333
           PAS++++S   +I  +   D   RS      FN  F  L RGF+S  + P  +      +
Sbjct: 21  PASSALLS---RIHSSNGGDGSSRSISSPHLFNSEFRDLIRGFSSESLAPSHDLGMISDL 77

Query: 334 PATVAAITNPTSKIIYDEHNHERYPPGDPSKRAFAYFVLTGGRFVYASLIRLLVLKFVLS 513
           P TVAA+ NPTSKI+YD+HNHER+PPGDPSKRAFAYFVLTGGRF+YASLIRLLVLKFVLS
Sbjct: 78  PPTVAALKNPTSKIVYDDHNHERFPPGDPSKRAFAYFVLTGGRFIYASLIRLLVLKFVLS 137

Query: 514 MSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIRRRTDDDVKLANSVDVSSLRDPQ 693
           MSASKDVLALAS+EVDLSSIEPGSTVTVKWRGKPVFIRRRT+DD+KLANSVDV SLRDPQ
Sbjct: 138 MSASKDVLALASIEVDLSSIEPGSTVTVKWRGKPVFIRRRTEDDIKLANSVDVGSLRDPQ 197

Query: 694 EDAARVKNPEWLIVVGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAPYNLE 873
           EDA RVK+PEWLIV+GVCTHLGCIPLPNAGDFGGWFCPCHGSHYD+SGRIRKGPAPYNLE
Sbjct: 198 EDAVRVKDPEWLIVIGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDVSGRIRKGPAPYNLE 257

Query: 874 VPTYSFMEDNKLLIG 918
           VPTYSF+E+NKL+IG
Sbjct: 258 VPTYSFLEENKLMIG 272


>sp|P49729.1|UCRI1_TOBAC RecName: Full=Cytochrome b-c1 complex subunit Rieske-1,
           mitochondrial; AltName: Full=Complex III subunit 5-1;
           AltName: Full=Rieske iron-sulfur protein 1; Short=RISP1;
           AltName: Full=Ubiquinol-cytochrome c reductase
           iron-sulfur subunit 1; Flags: Precursor
           gi|170322|gb|AAA34112.1| Rieske Fe-S protein, partial
           [Nicotiana tabacum]
          Length = 258

 Score =  395 bits (1016), Expect = e-107
 Identities = 194/254 (76%), Positives = 215/254 (84%), Gaps = 4/254 (1%)
 Frame = +1

Query: 169 PASASIISTNTQIQDAAADYHLRSTHCSPPFNHPFHQLSRGFASNLITPRFE----DKIP 336
           P+S++ IS N    D   D        SP     F   +RGF+SN ++P  +      +P
Sbjct: 8   PSSSAFISANHFSSD---DDSSSPRSISPSLASVFLHHTRGFSSNSVSPAHDMGLVPDLP 64

Query: 337 ATVAAITNPTSKIIYDEHNHERYPPGDPSKRAFAYFVLTGGRFVYASLIRLLVLKFVLSM 516
            TVAAI NPTSKI+YDEHNHERYPPGDPSKRAFAYFVLTGGRFVYASL+RLL+LKFVLSM
Sbjct: 65  PTVAAIKNPTSKIVYDEHNHERYPPGDPSKRAFAYFVLTGGRFVYASLMRLLILKFVLSM 124

Query: 517 SASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIRRRTDDDVKLANSVDVSSLRDPQE 696
           SASKDVLALASLEVDLSSIEPG+TVTVKWRGKPVFIRRRT+DD+ LANSVD+ SLRDPQ+
Sbjct: 125 SASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTEDDISLANSVDLGSLRDPQQ 184

Query: 697 DAARVKNPEWLIVVGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAPYNLEV 876
           DA RVKNPEWL+V+GVCTHLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAPYNLEV
Sbjct: 185 DAERVKNPEWLVVIGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKGPAPYNLEV 244

Query: 877 PTYSFMEDNKLLIG 918
           PTYSF+E+NKLLIG
Sbjct: 245 PTYSFLEENKLLIG 258


>ref|XP_002512828.1| ubiquinol-cytochrome C reductase iron-sulfur subunit, putative
           [Ricinus communis] gi|223547839|gb|EEF49331.1|
           ubiquinol-cytochrome C reductase iron-sulfur subunit,
           putative [Ricinus communis]
          Length = 280

 Score =  395 bits (1014), Expect = e-107
 Identities = 196/262 (74%), Positives = 224/262 (85%), Gaps = 7/262 (2%)
 Frame = +1

Query: 154 WRHNNPASASIISTNT-QIQDAAADYHLRSTHCSP--PFNHPFHQLSRGFASNLITPRFE 324
           WR N  A+++I S N     D+++   ++S   +    F   FH   RGF+S+ + P+ E
Sbjct: 19  WRPNQAATSAIASRNPINGGDSSSSDDVKSKVLNDYFAFRPQFHIPHRGFSSDSLMPKNE 78

Query: 325 D----KIPATVAAITNPTSKIIYDEHNHERYPPGDPSKRAFAYFVLTGGRFVYASLIRLL 492
           D    ++PATVAAI NPT KI+YDE+NHER+PPGDPSKRAFAYFVLTGGRFVYASLIRLL
Sbjct: 79  DGIVSEVPATVAAIKNPTPKIVYDEYNHERFPPGDPSKRAFAYFVLTGGRFVYASLIRLL 138

Query: 493 VLKFVLSMSASKDVLALASLEVDLSSIEPGSTVTVKWRGKPVFIRRRTDDDVKLANSVDV 672
           +LK VLSMSASKDVLALASLEVDLSSIEPG+TVTVKWRGKPVFIRRRT+DD+KLANSV++
Sbjct: 139 ILKLVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIRRRTEDDIKLANSVEL 198

Query: 673 SSLRDPQEDAARVKNPEWLIVVGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKG 852
           +SLRDPQ DA RVKNPEWLIVVGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKG
Sbjct: 199 ASLRDPQPDADRVKNPEWLIVVGVCTHLGCIPLPNAGDFGGWFCPCHGSHYDISGRIRKG 258

Query: 853 PAPYNLEVPTYSFMEDNKLLIG 918
           PAPYNLEVPTYSF+++NKLLIG
Sbjct: 259 PAPYNLEVPTYSFLDENKLLIG 280


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