BLASTX nr result

ID: Atractylodes21_contig00002444 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00002444
         (1103 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK36205.1| unknown [Lotus japonicus]                              382   e-104
ref|XP_002300699.1| predicted protein [Populus trichocarpa] gi|2...   377   e-102
gb|ACJ84671.1| unknown [Medicago truncatula]                          375   e-102
ref|XP_003607043.1| Signal recognition particle receptor subunit...   375   e-102
ref|XP_002265544.2| PREDICTED: signal recognition particle recep...   374   e-101

>gb|AFK36205.1| unknown [Lotus japonicus]
          Length = 259

 Score =  382 bits (982), Expect = e-104
 Identities = 186/240 (77%), Positives = 210/240 (87%)
 Frame = -3

Query: 954 EFARQIPPTQIYIAIGVVFFTLLLYLICAAFKHTISNTIVLSGLSGGGKTVLFYQLRDGS 775
           ++ RQ+PP Q+YIA  +  FT LL L    FK   +NT+VL+GL+G GKTVLFYQLRDGS
Sbjct: 20  DYLRQVPPEQLYIAAAIAVFTTLLLLSLRLFKRAKTNTVVLTGLTGSGKTVLFYQLRDGS 79

Query: 774 SHQGTVTSMEPNEGLFVLNTETSKKGKIKPVHLVDFPGHARLRPKLDEYLPQAAGIVFVV 595
           +HQGTVTSMEPNEG F+L++ET+KKGK+KPVH+VD PGH+RLRPKLDEYLPQAAG+VFVV
Sbjct: 80  THQGTVTSMEPNEGTFILHSETTKKGKVKPVHIVDVPGHSRLRPKLDEYLPQAAGVVFVV 139

Query: 594 DAVEFLPNCRAVSEYLYDILTKASVVKRKIPLLILCNKVDKVTAHTKEFIRKQLEKEIDK 415
           DAV+FLPNCRA SEYLYDILTK SVVK+KIPLLILCNK DKVTAHTKEFIR+QLEKEIDK
Sbjct: 140 DAVDFLPNCRAASEYLYDILTKGSVVKKKIPLLILCNKTDKVTAHTKEFIRRQLEKEIDK 199

Query: 414 LRTSRKAVSDADVTNEFTLGVPGEPFSFSQCINKVTVAEASALTGEILPLEQFIRERVKP 235
           LR SR AVSDADVTNEFTLGVPGE FSF+QC NKVT A+AS LTGEI  LE+FIRE VKP
Sbjct: 200 LRASRSAVSDADVTNEFTLGVPGEAFSFTQCCNKVTTADASGLTGEISQLEEFIREYVKP 259


>ref|XP_002300699.1| predicted protein [Populus trichocarpa] gi|222842425|gb|EEE79972.1|
            predicted protein [Populus trichocarpa]
          Length = 258

 Score =  377 bits (969), Expect = e-102
 Identities = 190/265 (71%), Positives = 220/265 (83%)
 Frame = -3

Query: 1032 LDRIELVKAQLQPYLRQGEEYVRRLEEFARQIPPTQIYIAIGVVFFTLLLYLICAAFKHT 853
            ++ IE  K + Q +L+QG EY       A Q+PPTQ+Y A+ V+ FT LL L     K T
Sbjct: 1    MEGIEQWKTEAQQWLQQGIEY-------AHQLPPTQLYAAVAVLLFTTLLLLTIRLLKRT 53

Query: 852  ISNTIVLSGLSGGGKTVLFYQLRDGSSHQGTVTSMEPNEGLFVLNTETSKKGKIKPVHLV 673
             SNTIVLSGLSG GKTVLFYQLRDGSSHQGTVTSMEPNEG F+L++E++KKGKIKPVH+V
Sbjct: 54   KSNTIVLSGLSGSGKTVLFYQLRDGSSHQGTVTSMEPNEGTFLLHSESAKKGKIKPVHVV 113

Query: 672  DFPGHARLRPKLDEYLPQAAGIVFVVDAVEFLPNCRAVSEYLYDILTKASVVKRKIPLLI 493
            D PGH+RLRPKLD++LPQAAGIVFVVDA+EFLPN  AV+EYLYDILTKASVVKRK+P+LI
Sbjct: 114  DVPGHSRLRPKLDDFLPQAAGIVFVVDALEFLPNLSAVTEYLYDILTKASVVKRKLPVLI 173

Query: 492  LCNKVDKVTAHTKEFIRKQLEKEIDKLRTSRKAVSDADVTNEFTLGVPGEPFSFSQCINK 313
             CNK DKVTAHTKEFIRKQLEKEI+KLR SR  VSDAD+ N++TLG+PGE FSFSQCINK
Sbjct: 174  CCNKTDKVTAHTKEFIRKQLEKEIEKLRVSRSGVSDADIANDYTLGIPGEVFSFSQCINK 233

Query: 312  VTVAEASALTGEILPLEQFIRERVK 238
            VT+ EAS LTGEI  +E+FIR  VK
Sbjct: 234  VTIGEASGLTGEISQVEEFIRAHVK 258


>gb|ACJ84671.1| unknown [Medicago truncatula]
          Length = 260

 Score =  375 bits (964), Expect = e-102
 Identities = 187/259 (72%), Positives = 215/259 (83%), Gaps = 4/259 (1%)
 Frame = -3

Query: 1002 LQPYLRQGEEYVRRL----EEFARQIPPTQIYIAIGVVFFTLLLYLICAAFKHTISNTIV 835
            +Q  L Q +E    L     ++ R +PP Q+Y A  +  FT LL L     K T SNTIV
Sbjct: 1    MQHELEQWKEQFSHLWNVANDYLRDVPPNQLYAAAAIAIFTTLLLLFLRVLKRTESNTIV 60

Query: 834  LSGLSGGGKTVLFYQLRDGSSHQGTVTSMEPNEGLFVLNTETSKKGKIKPVHLVDFPGHA 655
            L+GLSG GKTVLFYQLRDGS+HQGTVTSMEPNEG F+L+ ET+KKGKIKPVH+VD PGH+
Sbjct: 61   LTGLSGSGKTVLFYQLRDGSTHQGTVTSMEPNEGTFILHGETAKKGKIKPVHIVDVPGHS 120

Query: 654  RLRPKLDEYLPQAAGIVFVVDAVEFLPNCRAVSEYLYDILTKASVVKRKIPLLILCNKVD 475
            RLRPKLDE+LPQAAGIVFVVDA++FLPNCRA SEYLYD+LTK SVV++KIPLLILCNK D
Sbjct: 121  RLRPKLDEFLPQAAGIVFVVDALDFLPNCRAASEYLYDLLTKGSVVRKKIPLLILCNKTD 180

Query: 474  KVTAHTKEFIRKQLEKEIDKLRTSRKAVSDADVTNEFTLGVPGEPFSFSQCINKVTVAEA 295
            KVTAHTKEFIR+Q+EKEIDKLR+SR AVS+ADVTNEFTLGVPGEPFSF+QC NKVT A+A
Sbjct: 181  KVTAHTKEFIRRQIEKEIDKLRSSRSAVSEADVTNEFTLGVPGEPFSFTQCSNKVTTADA 240

Query: 294  SALTGEILPLEQFIRERVK 238
            S LTGEI  L++FIRE VK
Sbjct: 241  SGLTGEISQLQEFIREYVK 259


>ref|XP_003607043.1| Signal recognition particle receptor subunit beta [Medicago
            truncatula] gi|355508098|gb|AES89240.1| Signal
            recognition particle receptor subunit beta [Medicago
            truncatula]
          Length = 260

 Score =  375 bits (964), Expect = e-102
 Identities = 187/259 (72%), Positives = 215/259 (83%), Gaps = 4/259 (1%)
 Frame = -3

Query: 1002 LQPYLRQGEEYVRRL----EEFARQIPPTQIYIAIGVVFFTLLLYLICAAFKHTISNTIV 835
            +Q  L Q +E    L     ++ R +PP Q+Y A  +  FT LL L     K T SNTIV
Sbjct: 1    MQHELEQWKEQFSHLWNVANDYLRDVPPNQLYAAAAIAIFTTLLLLFLRVLKRTKSNTIV 60

Query: 834  LSGLSGGGKTVLFYQLRDGSSHQGTVTSMEPNEGLFVLNTETSKKGKIKPVHLVDFPGHA 655
            L+GLSG GKTVLFYQLRDGS+HQGTVTSMEPNEG F+L+ ET+KKGKIKPVH+VD PGH+
Sbjct: 61   LTGLSGSGKTVLFYQLRDGSTHQGTVTSMEPNEGTFILHGETAKKGKIKPVHIVDVPGHS 120

Query: 654  RLRPKLDEYLPQAAGIVFVVDAVEFLPNCRAVSEYLYDILTKASVVKRKIPLLILCNKVD 475
            RLRPKLDE+LPQAAGIVFVVDA++FLPNCRA SEYLYD+LTK SVV++KIPLLILCNK D
Sbjct: 121  RLRPKLDEFLPQAAGIVFVVDALDFLPNCRAASEYLYDLLTKGSVVRKKIPLLILCNKTD 180

Query: 474  KVTAHTKEFIRKQLEKEIDKLRTSRKAVSDADVTNEFTLGVPGEPFSFSQCINKVTVAEA 295
            KVTAHTKEFIR+Q+EKEIDKLR+SR AVS+ADVTNEFTLGVPGEPFSF+QC NKVT A+A
Sbjct: 181  KVTAHTKEFIRRQIEKEIDKLRSSRSAVSEADVTNEFTLGVPGEPFSFTQCSNKVTTADA 240

Query: 294  SALTGEILPLEQFIRERVK 238
            S LTGEI  L++FIRE VK
Sbjct: 241  SGLTGEISQLQEFIREYVK 259


>ref|XP_002265544.2| PREDICTED: signal recognition particle receptor subunit beta-like
            [Vitis vinifera] gi|297739076|emb|CBI28565.3| unnamed
            protein product [Vitis vinifera]
          Length = 259

 Score =  374 bits (961), Expect = e-101
 Identities = 191/266 (71%), Positives = 216/266 (81%)
 Frame = -3

Query: 1032 LDRIELVKAQLQPYLRQGEEYVRRLEEFARQIPPTQIYIAIGVVFFTLLLYLICAAFKHT 853
            +D +E  + QLQ + RQG E+         Q+P TQ+Y AI VVF T    L    FK T
Sbjct: 1    MDELEQWRIQLQQWSRQGAEWFH-------QMPETQLYAAIAVVFVTTFFLLSIRLFKRT 53

Query: 852  ISNTIVLSGLSGGGKTVLFYQLRDGSSHQGTVTSMEPNEGLFVLNTETSKKGKIKPVHLV 673
             SNT+VL+GLSG GKT LFYQL+DGSSH GTVTSM+PNEG FVL++E +KKGKIKPVH+V
Sbjct: 54   KSNTVVLTGLSGSGKTTLFYQLQDGSSHLGTVTSMDPNEGTFVLHSEIAKKGKIKPVHVV 113

Query: 672  DFPGHARLRPKLDEYLPQAAGIVFVVDAVEFLPNCRAVSEYLYDILTKASVVKRKIPLLI 493
            D PGH+RLRPKLDE+LPQAAGIVFVVDA+EFLPNCRA SEYLYDILTK+SVVK+KIP+LI
Sbjct: 114  DVPGHSRLRPKLDEFLPQAAGIVFVVDALEFLPNCRAASEYLYDILTKSSVVKKKIPVLI 173

Query: 492  LCNKVDKVTAHTKEFIRKQLEKEIDKLRTSRKAVSDADVTNEFTLGVPGEPFSFSQCINK 313
            LCNK DKVTAHTKEFIRKQLEKEI+K R SR A+S ADV NEFTLGVPGE F FSQC NK
Sbjct: 174  LCNKTDKVTAHTKEFIRKQLEKEIEKFRASRSAISAADVVNEFTLGVPGEAFGFSQCHNK 233

Query: 312  VTVAEASALTGEILPLEQFIRERVKP 235
            VTVA+AS LTGEI  LE+FIRE VKP
Sbjct: 234  VTVADASGLTGEISQLEEFIREYVKP 259


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