BLASTX nr result

ID: Atractylodes21_contig00002440 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00002440
         (1122 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281066.1| PREDICTED: pre-mRNA-splicing factor SPF27 ho...   377   e-102
ref|XP_002322083.1| predicted protein [Populus trichocarpa] gi|2...   366   6e-99
ref|XP_004137495.1| PREDICTED: pre-mRNA-splicing factor SPF27 ho...   357   3e-96
ref|XP_003631066.1| Pre-mRNA-splicing factor SPF27-like protein ...   340   5e-91
ref|XP_002529563.1| Breast carcinoma amplified sequence, putativ...   335   9e-90

>ref|XP_002281066.1| PREDICTED: pre-mRNA-splicing factor SPF27 homolog [Vitis vinifera]
          Length = 256

 Score =  377 bits (968), Expect = e-102
 Identities = 186/245 (75%), Positives = 211/245 (86%), Gaps = 1/245 (0%)
 Frame = -2

Query: 1043 ICNGDKVMLLEAPP-SSRPSWSTSAAQIDALPYIDDEYGDPKVKAEVDRMIEEEMRRSSK 867
            + N   +++LEAPP +SRP     A  IDALPYIDD+YG PKVK EVDR++E+EMRRSSK
Sbjct: 1    MANDGDILMLEAPPQASRP-----AEFIDALPYIDDDYGHPKVKEEVDRLVEDEMRRSSK 55

Query: 866  KPSDYLKDLPPVAKFNFESYPMLAREYERVRAGKPMVPLDMSRYGLDIPSMNKRNDETAW 687
            KPSD+LKDLPP+  F F ++PMLAREYERVRAGKP V LDMSRYGL++P MNKRNDETAW
Sbjct: 56   KPSDFLKDLPPLPPFGFHNHPMLAREYERVRAGKPPVALDMSRYGLEMPPMNKRNDETAW 115

Query: 686  KQALQKSQRLLQHQVIRLENLDLMSRYGADVWKQHNQRLEAFLSRMQAQAAELNEKIEIV 507
            K ALQK+QRLLQHQVIRLENL+LMS++GADVWKQHNQRLEA+LSRMQA A E NEKIE V
Sbjct: 116  KHALQKAQRLLQHQVIRLENLELMSKHGADVWKQHNQRLEAYLSRMQALAMEQNEKIETV 175

Query: 506  NRERKYHQQNTAFELNALSAQWKELCEKNISIEAACVKIESYLEELKAEAMERGWNLDIN 327
            NRERKYHQQNTAFELNALSAQWKELCEKNI I  AC KIE+ +EEL+ EA ERGWNLD N
Sbjct: 176  NRERKYHQQNTAFELNALSAQWKELCEKNIEIRTACAKIENNIEELRREAAERGWNLDAN 235

Query: 326  MENGS 312
            ++NGS
Sbjct: 236  IDNGS 240


>ref|XP_002322083.1| predicted protein [Populus trichocarpa] gi|222869079|gb|EEF06210.1|
            predicted protein [Populus trichocarpa]
          Length = 255

 Score =  366 bits (939), Expect = 6e-99
 Identities = 183/255 (71%), Positives = 215/255 (84%), Gaps = 3/255 (1%)
 Frame = -2

Query: 1061 MTTANKICNGDKVMLLEAPPSSRPSWSTS--AAQIDALPYIDDEYGDPKVKAEVDRMIEE 888
            M T+N   NGD +ML  AP +SRP WSTS  A  IDALPYIDD+YG+P VKAEVDR++EE
Sbjct: 1    MATSNS-ANGDMLMLEAAPEASRP-WSTSSNAEIIDALPYIDDDYGNPSVKAEVDRLVEE 58

Query: 887  EMRRSSKKPSDYLKDLPPVAKFNFESYPMLAREYERVRAGKPMVPLDMSRYG-LDIPSMN 711
            EMRRSSKKPSD+LK+LPPV KF FE+YPMLA+EYERVRAG+P V LD SRY  LD+P+ N
Sbjct: 59   EMRRSSKKPSDFLKELPPVPKFTFENYPMLAKEYERVRAGRPPVTLDFSRYSHLDLPAAN 118

Query: 710  KRNDETAWKQALQKSQRLLQHQVIRLENLDLMSRYGADVWKQHNQRLEAFLSRMQAQAAE 531
            K NDETAWKQALQ++QRLLQHQVIRLENL+LMS+YG +VW QHN++LE  L+R Q  A E
Sbjct: 119  KMNDETAWKQALQRAQRLLQHQVIRLENLELMSKYGPEVWIQHNRQLETMLTRTQKLARE 178

Query: 530  LNEKIEIVNRERKYHQQNTAFELNALSAQWKELCEKNISIEAACVKIESYLEELKAEAME 351
             NEKIE VNRERKYHQQNTA+ELNALSAQWKELC+KNI I+ AC+KIE+ +EELK E+ E
Sbjct: 179  QNEKIEAVNRERKYHQQNTAYELNALSAQWKELCQKNIEIQEACIKIENQIEELKRESSE 238

Query: 350  RGWNLDINMENGSSL 306
            RGWN++ N+ENGS L
Sbjct: 239  RGWNVEANIENGSLL 253


>ref|XP_004137495.1| PREDICTED: pre-mRNA-splicing factor SPF27 homolog [Cucumis sativus]
            gi|449503115|ref|XP_004161841.1| PREDICTED:
            pre-mRNA-splicing factor SPF27 homolog [Cucumis sativus]
          Length = 256

 Score =  357 bits (916), Expect = 3e-96
 Identities = 172/249 (69%), Positives = 212/249 (85%), Gaps = 4/249 (1%)
 Frame = -2

Query: 1037 NGDKVMLLEAPPS-SRPSW--STSAAQIDALPYIDDEYGDPKVKAEVDRMIEEEMRRSSK 867
            NGD +++LEAPP  S+P+W  S  A  IDALPYIDD+Y DP+VKAEVDR++EEEMRRSSK
Sbjct: 7    NGD-ILMLEAPPQPSQPAWRVSADAEVIDALPYIDDDYADPRVKAEVDRLVEEEMRRSSK 65

Query: 866  KPSDYLKDLPPVAKFNFESYPMLAREYERVRAGKPMVPLDMSRYGLDIPSMNKRNDETAW 687
            +P+D+LKDLPP+ KF FE +PMLAREYERVRAG+P VPLD++RY L+ P  NK+NDETAW
Sbjct: 66   RPADFLKDLPPLPKFKFEDHPMLAREYERVRAGRPPVPLDVARYKLETPPPNKKNDETAW 125

Query: 686  KQALQKSQRLLQHQVIRLENLDLMSRYGADVWKQHNQRLEAFLSRMQAQAAELNEKIEIV 507
            KQ LQK+Q LL+HQV+RLENLDLMS+YG D+WKQHN++LEA LSRMQ  A E NEKIE V
Sbjct: 126  KQTLQKAQCLLRHQVLRLENLDLMSKYGPDIWKQHNKQLEALLSRMQKLAQEQNEKIEKV 185

Query: 506  NRERKYHQQNTAFELNALSAQWKELCEKNISIEAACVKIESYLEELKAEAMERGWNLDIN 327
            NRERK+HQQN A+EL+ALS QWKELCEKN+ I+ AC ++E  ++EL+ EA E+GWNL++N
Sbjct: 186  NRERKFHQQNAAYELHALSTQWKELCEKNMEIQVACFQLEGQIQELRREAAEKGWNLEVN 245

Query: 326  MENGS-SLP 303
            +ENGS SLP
Sbjct: 246  VENGSVSLP 254


>ref|XP_003631066.1| Pre-mRNA-splicing factor SPF27-like protein [Medicago truncatula]
            gi|355525088|gb|AET05542.1| Pre-mRNA-splicing factor
            SPF27-like protein [Medicago truncatula]
            gi|388502546|gb|AFK39339.1| unknown [Medicago truncatula]
          Length = 261

 Score =  340 bits (871), Expect = 5e-91
 Identities = 163/248 (65%), Positives = 197/248 (79%)
 Frame = -2

Query: 1058 TTANKICNGDKVMLLEAPPSSRPSWSTSAAQIDALPYIDDEYGDPKVKAEVDRMIEEEMR 879
            +++N   NGD V++LEAPPS   S  + A  IDALPYIDD+Y DP+VK EVDR++EEEMR
Sbjct: 8    SSSNSNSNGD-VLMLEAPPSYGRSSHSDAEIIDALPYIDDDYSDPRVKIEVDRLVEEEMR 66

Query: 878  RSSKKPSDYLKDLPPVAKFNFESYPMLAREYERVRAGKPMVPLDMSRYGLDIPSMNKRND 699
            RSSKKP+D+LKD PP+   NF  YPM+ REYERVRAG+P V LD SRY L+ P +NKRND
Sbjct: 67   RSSKKPADFLKDFPPLPSSNFHDYPMIGREYERVRAGRPPVSLDRSRYELEAPPVNKRND 126

Query: 698  ETAWKQALQKSQRLLQHQVIRLENLDLMSRYGADVWKQHNQRLEAFLSRMQAQAAELNEK 519
            ETAWK A+Q++QRLLQ+Q IR+ENLDL+ ++G D WKQHNQRLE +LSRMQ  A E N+K
Sbjct: 127  ETAWKLAIQRAQRLLQYQTIRMENLDLLFKHGPDAWKQHNQRLEVYLSRMQKLAQEQNDK 186

Query: 518  IEIVNRERKYHQQNTAFELNALSAQWKELCEKNISIEAACVKIESYLEELKAEAMERGWN 339
            IE VNRERKYHQQNTA+ELNALS QW ELC+KNI I+  C  +E++L EL+ EA ERGWN
Sbjct: 187  IEKVNRERKYHQQNTAYELNALSMQWNELCQKNIDIKVVCASVETHLNELRREAAERGWN 246

Query: 338  LDINMENG 315
            LD   ENG
Sbjct: 247  LDAITENG 254


>ref|XP_002529563.1| Breast carcinoma amplified sequence, putative [Ricinus communis]
            gi|223530975|gb|EEF32832.1| Breast carcinoma amplified
            sequence, putative [Ricinus communis]
          Length = 237

 Score =  335 bits (860), Expect = 9e-90
 Identities = 168/232 (72%), Positives = 191/232 (82%), Gaps = 3/232 (1%)
 Frame = -2

Query: 1037 NGDKVMLLEAPPSSRPSW--STSAAQIDALPYIDDEYGDPKVKAEVDRMIEEEMRRSSKK 864
            NG+ +++LEA P +   W  ST+A  +DALPYIDDEYG+P +KAEVDR++EEEMRRS KK
Sbjct: 7    NGE-ILMLEAAPEASKKWTHSTNAEIVDALPYIDDEYGNPSIKAEVDRLVEEEMRRSHKK 65

Query: 863  PSDYLKDLPPVAKFNFESYPMLAREYERVRAGKPMVPLDMSRYG-LDIPSMNKRNDETAW 687
            PSD+LKDLPP+  F FE+YPML +EYERVRAGKP V LD SRY  LD+PS NK NDETAW
Sbjct: 66   PSDFLKDLPPLPTFTFENYPMLGKEYERVRAGKPPVTLDFSRYSHLDLPSANKMNDETAW 125

Query: 686  KQALQKSQRLLQHQVIRLENLDLMSRYGADVWKQHNQRLEAFLSRMQAQAAELNEKIEIV 507
            KQALQ+ QRLLQHQVIRLENL+LMS+YG DVW QHN+ LEA LSRMQ  A E NEKIE V
Sbjct: 126  KQALQRGQRLLQHQVIRLENLELMSKYGPDVWIQHNRTLEAMLSRMQKLAQEQNEKIEAV 185

Query: 506  NRERKYHQQNTAFELNALSAQWKELCEKNISIEAACVKIESYLEELKAEAME 351
            NRERKYHQQNTA+ELNALS QWKELC KNI I+AAC KIE  +EELK EA E
Sbjct: 186  NRERKYHQQNTAYELNALSMQWKELCLKNIEIQAACTKIEMQIEELKKEAAE 237


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