BLASTX nr result

ID: Atractylodes21_contig00002397 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00002397
         (503 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275411.2| PREDICTED: tRNA-dihydrouridine synthase 3-li...   206   1e-51
ref|XP_003522816.1| PREDICTED: tRNA-dihydrouridine synthase 3-li...   204   6e-51
ref|XP_004148548.1| PREDICTED: tRNA-dihydrouridine(47) synthase ...   201   5e-50
ref|XP_003604013.1| tRNA-dihydrouridine synthase 3-like protein ...   186   2e-45
ref|XP_002513011.1| tRNA-dihydrouridine synthase, putative [Rici...   186   2e-45

>ref|XP_002275411.2| PREDICTED: tRNA-dihydrouridine synthase 3-like [Vitis vinifera]
           gi|297744713|emb|CBI37975.3| unnamed protein product
           [Vitis vinifera]
          Length = 678

 Score =  206 bits (525), Expect = 1e-51
 Identities = 101/154 (65%), Positives = 118/154 (76%), Gaps = 1/154 (0%)
 Frame = +3

Query: 45  DAVPVSTTASAPVIKEKKSKRQLKRERIQEKQSTRNICPMVAKTGKADSCPYNDKCRFSH 224
           D    S    +  +KEKKSKRQLKRER QE++S  NIC  +AKTG  ++CPYN+KCRFSH
Sbjct: 48  DVASDSKYTPSTFVKEKKSKRQLKRERRQEQKSALNICSEIAKTGNVNACPYNEKCRFSH 107

Query: 225 DIEAFKAQKPADLEGVCPFEGDDGPCPYGLACRFLGTHTTDVATGTLSGH-KNSEVNGLK 401
           D+EA+KAQKP DLEG CPF   +G CPYGLACRF GTH   VA G L+ H KNSE+NGL 
Sbjct: 108 DLEAYKAQKPDDLEGSCPFTSAEGACPYGLACRFSGTHKDGVAAGNLNLHKKNSEINGLN 167

Query: 402 KDVQRLLWKNKMKFPKADAKLKALGLMGPSAKSK 503
           KDVQ+LLWKNK++FPKADAKLK LGL+G  A SK
Sbjct: 168 KDVQKLLWKNKIRFPKADAKLKLLGLLG-KANSK 200


>ref|XP_003522816.1| PREDICTED: tRNA-dihydrouridine synthase 3-like [Glycine max]
          Length = 706

 Score =  204 bits (519), Expect = 6e-51
 Identities = 106/167 (63%), Positives = 122/167 (73%), Gaps = 1/167 (0%)
 Frame = +3

Query: 6   PNRLSSDNNGSSGDAVPVSTTASAPVIKEKKSKRQLKRERIQEKQSTRNICPMVAKTGKA 185
           P R SS N+G S   +P     ++ + KEKKSKRQLKRER  E++S RN+CP +AKTG  
Sbjct: 65  PVRSSSPNDGVS---IPNDNNKTSVLAKEKKSKRQLKRERRLEQKSARNLCPEIAKTGDV 121

Query: 186 DSCPYNDKCRFSHDIEAFKAQKPADLEGVCPFEGDDGPCPYGLACRFLGTHTTDVATGTL 365
            SCPY DKCRFSHD+EAFKAQKPADLEG CPF    G CPYGL CRF  TH   V +  L
Sbjct: 122 SSCPYKDKCRFSHDLEAFKAQKPADLEGQCPFFKSGGACPYGLGCRFSSTHEDGVPSANL 181

Query: 366 SGHK-NSEVNGLKKDVQRLLWKNKMKFPKADAKLKALGLMGPSAKSK 503
           +G K NSEVNGL K VQ+LLWKNKM F KADA+LK+LGL+G S KSK
Sbjct: 182 NGLKNNSEVNGLSKHVQKLLWKNKMSFSKADAQLKSLGLVGTS-KSK 227


>ref|XP_004148548.1| PREDICTED: tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like
           [Cucumis sativus] gi|449519930|ref|XP_004166987.1|
           PREDICTED: tRNA-dihydrouridine(47) synthase
           [NAD(P)(+)]-like [Cucumis sativus]
          Length = 698

 Score =  201 bits (511), Expect = 5e-50
 Identities = 98/146 (67%), Positives = 118/146 (80%), Gaps = 1/146 (0%)
 Frame = +3

Query: 69  ASAPVIKEKKSKRQLKRERIQEKQSTRNICPMVAKTGKADSCPYNDKCRFSHDIEAFKAQ 248
           A + ++KEKKSKRQLKRER QE++STR++CP +AKTG   SC Y+DKCRFSHDIEAFK+Q
Sbjct: 77  APSTLVKEKKSKRQLKRERRQEQKSTRHLCPEIAKTGDVSSCRYSDKCRFSHDIEAFKSQ 136

Query: 249 KPADLEGVCPFEGDDGPCPYGLACRFLGTHTTDVATG-TLSGHKNSEVNGLKKDVQRLLW 425
           KPADLEG CPF G +  CPYGLACRF GTH   V  G +++  + SE+NGL KD+Q+LLW
Sbjct: 137 KPADLEGECPFSGAEQLCPYGLACRFAGTHKEGVPAGSSVTLKRCSEMNGLNKDIQKLLW 196

Query: 426 KNKMKFPKADAKLKALGLMGPSAKSK 503
           KNKMKFPKAD+KLK LGL+G   KSK
Sbjct: 197 KNKMKFPKADSKLKELGLLG-HGKSK 221


>ref|XP_003604013.1| tRNA-dihydrouridine synthase 3-like protein [Medicago truncatula]
           gi|355493061|gb|AES74264.1| tRNA-dihydrouridine synthase
           3-like protein [Medicago truncatula]
          Length = 691

 Score =  186 bits (472), Expect = 2e-45
 Identities = 91/150 (60%), Positives = 109/150 (72%), Gaps = 6/150 (4%)
 Frame = +3

Query: 60  STTASAP------VIKEKKSKRQLKRERIQEKQSTRNICPMVAKTGKADSCPYNDKCRFS 221
           +TT+SAP      + KEKKSKRQLKRER+Q+K+ST+N+CP +AK+G  +SCPY   CRFS
Sbjct: 43  TTTSSAPNDKPPVLAKEKKSKRQLKRERLQDKKSTKNLCPNLAKSGDVNSCPYQVNCRFS 102

Query: 222 HDIEAFKAQKPADLEGVCPFEGDDGPCPYGLACRFLGTHTTDVATGTLSGHKNSEVNGLK 401
           HDI+AFK QK ADLEG CPF   +G CPYGL+CRFL TH       +       EVNG  
Sbjct: 103 HDIQAFKEQKLADLEGECPFLKSEGACPYGLSCRFLNTHQEGKPLSSNGLKVRCEVNGFS 162

Query: 402 KDVQRLLWKNKMKFPKADAKLKALGLMGPS 491
           KDVQ+LLWKNKM FPK DAKLK+LGL+  S
Sbjct: 163 KDVQKLLWKNKMTFPKTDAKLKSLGLLNKS 192


>ref|XP_002513011.1| tRNA-dihydrouridine synthase, putative [Ricinus communis]
           gi|223548022|gb|EEF49514.1| tRNA-dihydrouridine
           synthase, putative [Ricinus communis]
          Length = 686

 Score =  186 bits (472), Expect = 2e-45
 Identities = 93/139 (66%), Positives = 106/139 (76%), Gaps = 2/139 (1%)
 Frame = +3

Query: 81  VIKEKKSKRQLKRERIQEKQSTRNICPMVAKTGKADSCPYNDKCRFSHDIEAFKAQKPAD 260
           V KEKKSKRQLKRER +EK+S  N+CP +AKT   +SC Y DKCRFSHD+EAFKAQKP D
Sbjct: 69  VSKEKKSKRQLKRERREEKKSALNLCPELAKTEDVNSCRYGDKCRFSHDLEAFKAQKPDD 128

Query: 261 LEGVCPF-EGDDGPCPYGLACRFLGTHTTDVATGTLSGHK-NSEVNGLKKDVQRLLWKNK 434
           +EG CPF  G+   CPYGLACRF  TH   V     +  K +SEVNGL KDVQ+LLWKN+
Sbjct: 129 IEGKCPFINGEGKACPYGLACRFYSTHENGVKGDASNTRKQSSEVNGLNKDVQKLLWKNR 188

Query: 435 MKFPKADAKLKALGLMGPS 491
            KFPKADA LK+LGLMGPS
Sbjct: 189 FKFPKADAILKSLGLMGPS 207


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