BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00002355
         (369 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280003.2| PREDICTED: pentatricopeptide repeat-containi...   182   2e-44
emb|CBI26347.3| unnamed protein product [Vitis vinifera]              182   2e-44
ref|XP_002517032.1| pentatricopeptide repeat-containing protein,...   163   2e-38
ref|XP_002885540.1| pentatricopeptide repeat-containing protein ...   158   4e-37
ref|XP_002863007.1| pentatricopeptide repeat-containing protein ...   158   5e-37

>ref|XP_002280003.2| PREDICTED: pentatricopeptide repeat-containing protein At3g23020
           [Vitis vinifera]
          Length = 881

 Score =  182 bits (462), Expect = 2e-44
 Identities = 87/118 (73%), Positives = 104/118 (88%)
 Frame = +2

Query: 2   LPQKATFYLRKMQESGLVSDCVPYCAVISSFVKSSQLEMAVGLFKEMVGFKLEPDVVVYG 181
           LP KA FYL KMQE+ LVSDC+PYCAVISSF+K  QLEMA GLFKEM+G+ ++PDVVVYG
Sbjct: 583 LPHKAKFYLMKMQETQLVSDCIPYCAVISSFIKLGQLEMAEGLFKEMIGYNVQPDVVVYG 642

Query: 182 VLINAYADVGNIEEALHYVNAMNDKGLPMNSVICNSLIKLYTKVGCLKEAEEAYYMLQ 355
           +LINA+ADVGN+ EA++YVNA+ + GLPMN+VI NSLIKLYTKVG L+EA+EAY MLQ
Sbjct: 643 ILINAFADVGNVREAVNYVNALRNAGLPMNAVIYNSLIKLYTKVGYLEEAQEAYKMLQ 700



 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 32/108 (29%), Positives = 61/108 (56%)
 Frame = +2

Query: 8   QKATFYLRKMQESGLVSDCVPYCAVISSFVKSSQLEMAVGLFKEMVGFKLEPDVVVYGVL 187
           ++A   ++KM+E     D   Y  +IS   K + ++ A   FK+M   +LEPD+V Y  L
Sbjct: 377 EEAASLMQKMEELRCPPDTRTYNILISLHAKHNNIDRAASYFKKMKEARLEPDLVSYRTL 436

Query: 188 INAYADVGNIEEALHYVNAMNDKGLPMNSVICNSLIKLYTKVGCLKEA 331
           + A++    + EA   V+ M+++GL ++    ++L ++Y + G LK++
Sbjct: 437 LYAFSIRHLVGEAEILVSEMDERGLEIDEFTQSALTRMYIEAGMLKKS 484


>emb|CBI26347.3| unnamed protein product [Vitis vinifera]
          Length = 862

 Score =  182 bits (462), Expect = 2e-44
 Identities = 87/118 (73%), Positives = 104/118 (88%)
 Frame = +2

Query: 2   LPQKATFYLRKMQESGLVSDCVPYCAVISSFVKSSQLEMAVGLFKEMVGFKLEPDVVVYG 181
           LP KA FYL KMQE+ LVSDC+PYCAVISSF+K  QLEMA GLFKEM+G+ ++PDVVVYG
Sbjct: 564 LPHKAKFYLMKMQETQLVSDCIPYCAVISSFIKLGQLEMAEGLFKEMIGYNVQPDVVVYG 623

Query: 182 VLINAYADVGNIEEALHYVNAMNDKGLPMNSVICNSLIKLYTKVGCLKEAEEAYYMLQ 355
           +LINA+ADVGN+ EA++YVNA+ + GLPMN+VI NSLIKLYTKVG L+EA+EAY MLQ
Sbjct: 624 ILINAFADVGNVREAVNYVNALRNAGLPMNAVIYNSLIKLYTKVGYLEEAQEAYKMLQ 681



 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 32/108 (29%), Positives = 61/108 (56%)
 Frame = +2

Query: 8   QKATFYLRKMQESGLVSDCVPYCAVISSFVKSSQLEMAVGLFKEMVGFKLEPDVVVYGVL 187
           ++A   ++KM+E     D   Y  +IS   K + ++ A   FK+M   +LEPD+V Y  L
Sbjct: 358 EEAASLMQKMEELRCPPDTRTYNILISLHAKHNNIDRAASYFKKMKEARLEPDLVSYRTL 417

Query: 188 INAYADVGNIEEALHYVNAMNDKGLPMNSVICNSLIKLYTKVGCLKEA 331
           + A++    + EA   V+ M+++GL ++    ++L ++Y + G LK++
Sbjct: 418 LYAFSIRHLVGEAEILVSEMDERGLEIDEFTQSALTRMYIEAGMLKKS 465


>ref|XP_002517032.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223543667|gb|EEF45195.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 875

 Score =  163 bits (412), Expect = 2e-38
 Identities = 80/121 (66%), Positives = 99/121 (81%)
 Frame = +2

Query: 2   LPQKATFYLRKMQESGLVSDCVPYCAVISSFVKSSQLEMAVGLFKEMVGFKLEPDVVVYG 181
           LP KA  YL+KMQE+GLVSDCV YCAVISSFVK  +LEMA  ++KEMVGF ++PD++VYG
Sbjct: 588 LPDKAKHYLKKMQEAGLVSDCVQYCAVISSFVKLGKLEMAEEVYKEMVGFDVKPDIIVYG 647

Query: 182 VLINAYADVGNIEEALHYVNAMNDKGLPMNSVICNSLIKLYTKVGCLKEAEEAYYMLQRL 361
           VLINA+AD G ++EA+ Y++AM   GLP N+VI NSLIKLYTKVG L+EA+E Y +LQ  
Sbjct: 648 VLINAFADSGCVKEAISYIDAMKGAGLPGNTVIYNSLIKLYTKVGYLREAQETYKLLQSS 707

Query: 362 D 364
           D
Sbjct: 708 D 708


>ref|XP_002885540.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297331380|gb|EFH61799.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 841

 Score =  158 bits (400), Expect = 4e-37
 Identities = 78/119 (65%), Positives = 93/119 (78%)
 Frame = +2

Query: 2   LPQKATFYLRKMQESGLVSDCVPYCAVISSFVKSSQLEMAVGLFKEMVGFKLEPDVVVYG 181
           +P KA  YL KM+E+G VSDC+PYCAVISSFVK  QL MA  ++KEMV + +EPDVVVYG
Sbjct: 554 MPDKAKCYLEKMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYG 613

Query: 182 VLINAYADVGNIEEALHYVNAMNDKGLPMNSVICNSLIKLYTKVGCLKEAEEAYYMLQR 358
           VLINA+AD GN+++A+ YV AM + G+P NSVI NSLIKLYTKVG L EAE  Y  L R
Sbjct: 614 VLINAFADTGNVQQAMSYVEAMKEAGIPENSVIYNSLIKLYTKVGYLDEAEAIYRKLLR 672


>ref|XP_002863007.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297308804|gb|EFH39266.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 842

 Score =  158 bits (399), Expect = 5e-37
 Identities = 78/119 (65%), Positives = 93/119 (78%)
 Frame = +2

Query: 2   LPQKATFYLRKMQESGLVSDCVPYCAVISSFVKSSQLEMAVGLFKEMVGFKLEPDVVVYG 181
           +P KA  YL KM+E+G VSDC+PYCAVISSFVK  QL MA  ++KEMV + +EPDVVVYG
Sbjct: 555 MPDKAKCYLEKMRETGYVSDCIPYCAVISSFVKLGQLNMAEEVYKEMVEYNIEPDVVVYG 614

Query: 182 VLINAYADVGNIEEALHYVNAMNDKGLPMNSVICNSLIKLYTKVGCLKEAEEAYYMLQR 358
           VLINA+AD GN+++A+ YV AM + G+P NSVI NSLIKLYTKVG L EAE  Y  L R
Sbjct: 615 VLINAFADTGNVQQAMSYVEAMKEAGIPGNSVIYNSLIKLYTKVGYLDEAEAIYRKLLR 673