BLASTX nr result

ID: Atractylodes21_contig00002354 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00002354
         (288 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002317295.1| predicted protein [Populus trichocarpa] gi|2...    74   1e-11
ref|XP_002519709.1| conserved hypothetical protein [Ricinus comm...    71   8e-11
gb|AFK34959.1| unknown [Lotus japonicus]                               70   2e-10
ref|XP_004134587.1| PREDICTED: uncharacterized protein ycf23-lik...    65   4e-09
ref|XP_004162606.1| PREDICTED: uncharacterized protein ycf23-lik...    65   6e-09

>ref|XP_002317295.1| predicted protein [Populus trichocarpa] gi|222860360|gb|EEE97907.1|
           predicted protein [Populus trichocarpa]
          Length = 304

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 42/74 (56%), Positives = 49/74 (66%), Gaps = 4/74 (5%)
 Frame = -2

Query: 212 SSSICTPNSLLSYTRLKPNSNSI----PSHLPKRPSTLSFTPRASLSTPKETILKSFHER 45
           SSS+C P S  S++ LK N N +    PS  P +      T RA LST KET+LK FHER
Sbjct: 3   SSSVCMPISPSSHSLLKANHNPLQGSKPSCSPSKIRASYLTTRALLSTTKETVLKDFHER 62

Query: 44  RALKIISGLQNFDK 3
           RALKIISGLQNF+K
Sbjct: 63  RALKIISGLQNFNK 76


>ref|XP_002519709.1| conserved hypothetical protein [Ricinus communis]
           gi|223541126|gb|EEF42682.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 361

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 44/83 (53%), Positives = 56/83 (67%), Gaps = 8/83 (9%)
 Frame = -2

Query: 227 KVKEMSSSICTPNSLLSYTRLKPNSNS-IPSHLPKRPSTLSFTPRASLSTP-------KE 72
           K+++M SSI TP S  S+T L+PN++  + + LP +P   S   RASL+T        KE
Sbjct: 51  KLRKMHSSIFTPISSSSHTLLRPNNSPFLGNFLPSKPC-FSLKKRASLATTQALLSSTKE 109

Query: 71  TILKSFHERRALKIISGLQNFDK 3
           T+LK F ERRALKIISGLQNFDK
Sbjct: 110 TVLKDFQERRALKIISGLQNFDK 132


>gb|AFK34959.1| unknown [Lotus japonicus]
          Length = 305

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 42/76 (55%), Positives = 46/76 (60%), Gaps = 5/76 (6%)
 Frame = -2

Query: 215 MSSSICTPNSLLSYTRLKPNSN-----SIPSHLPKRPSTLSFTPRASLSTPKETILKSFH 51
           M S  CTP S  S+T LKPN+N     S     P       FT RA LS+ KET+LK F 
Sbjct: 1   MHSLTCTPVSSPSHTPLKPNNNNPLLGSTWRPCPPLKRRACFTTRALLSSTKETVLKDFQ 60

Query: 50  ERRALKIISGLQNFDK 3
           ERRALKIISGL NFDK
Sbjct: 61  ERRALKIISGLHNFDK 76


>ref|XP_004134587.1| PREDICTED: uncharacterized protein ycf23-like [Cucumis sativus]
          Length = 350

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 44/103 (42%), Positives = 52/103 (50%), Gaps = 11/103 (10%)
 Frame = -2

Query: 278 ANFSYPFSLPGSTQ*KCKVK------EMSSSICTPNSLLSYTRLKPNSNSIPSHLPKRPS 117
           A F YPF L       C  K       M +S C+P+S  S    K N N +  HL   P 
Sbjct: 20  APFPYPFPLLLLLLQHCLQKLYLGKKNMHTSFCSPSSSSSLAIFKLNQNPLLPHLVSTPR 79

Query: 116 TL-----SFTPRASLSTPKETILKSFHERRALKIISGLQNFDK 3
                  + T RA LS  +E +LK FHERRALKIISGLQN D+
Sbjct: 80  LTLKRRPASTTRALLSAHRELVLKDFHERRALKIISGLQNLDR 122


>ref|XP_004162606.1| PREDICTED: uncharacterized protein ycf23-like [Cucumis sativus]
          Length = 352

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 37/78 (47%), Positives = 45/78 (57%), Gaps = 5/78 (6%)
 Frame = -2

Query: 221 KEMSSSICTPNSLLSYTRLKPNSNSIPSHLPKRPSTL-----SFTPRASLSTPKETILKS 57
           K M +S C+P+S  S    K N N +  HL   P        + T RA LS  +E +LK 
Sbjct: 47  KNMHTSFCSPSSSSSLAIFKLNQNPLLPHLVSTPRLTLKRRPASTTRALLSAHRELVLKD 106

Query: 56  FHERRALKIISGLQNFDK 3
           FHERRALKIISGLQN D+
Sbjct: 107 FHERRALKIISGLQNLDR 124


Top