BLASTX nr result

ID: Atractylodes21_contig00002347 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00002347
         (609 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAM12553.1|AF492469_1 tuber agglutinin [Helianthus tuberosus]      107   1e-21
gb|AAL84814.1|AF477031_1 tuber agglutinin [Helianthus tuberosus]      106   4e-21
gb|AAL84816.1|AF477033_1 tuber agglutinin [Helianthus tuberosus]      105   5e-21
pdb|1C3K|A Chain A, Crystal Structure Of Helianthus Tuberosus Le...   105   6e-21
gb|AAD11578.1| lectin 2 [Helianthus tuberosus]                        103   2e-20

>gb|AAM12553.1|AF492469_1 tuber agglutinin [Helianthus tuberosus]
          Length = 147

 Score =  107 bits (268), Expect = 1e-21
 Identities = 58/142 (40%), Positives = 78/142 (54%), Gaps = 1/142 (0%)
 Frame = -1

Query: 582 IALVGPWGSSDGENWSFKARG-KITKIFIGHGECIDSIGFASQGDDGNVLHSPRFGGFGG 406
           +   GPWG   G+ W   A G KIT I I  G CI SI F  +  D    HS +FG   G
Sbjct: 7   VVQAGPWGGKGGKRWLQTAHGGKITSIIIKGGTCIFSIQFVYKDKDNTEYHSGQFG-VQG 65

Query: 405 DAXXXXXXXXXXXLNVISGTIGYFESQMVVTSISFSTEERKFGPFGRENGTHFSLPISKA 226
           D            +  +SGT G +    VVTS++F T ++ +GPFG+   + FSLP++K 
Sbjct: 66  DKAETITFADDEDITAVSGTFGAYYHMTVVTSLTFQTNKKVYGPFGKVTSSSFSLPLTKG 125

Query: 225 IFAGFFGRSGDLLNAIGVYLKP 160
            FAGFFG SGD+L++IG  + P
Sbjct: 126 KFAGFFGNSGDVLDSIGGVVVP 147


>gb|AAL84814.1|AF477031_1 tuber agglutinin [Helianthus tuberosus]
          Length = 147

 Score =  106 bits (264), Expect = 4e-21
 Identities = 60/138 (43%), Positives = 78/138 (56%), Gaps = 1/138 (0%)
 Frame = -1

Query: 570 GPWGSSDGENWSFKARG-KITKIFIGHGECIDSIGFASQGDDGNVLHSPRFGGFGGDAXX 394
           GPWG + G+ W   ARG KIT I I  G CI SI F  +  D    HS +FG   GD   
Sbjct: 11  GPWGGNGGKRWLQTARGGKITSIIIKGGTCIFSIQFVYKDKDNIEYHSGQFG-VQGDKAE 69

Query: 393 XXXXXXXXXLNVISGTIGYFESQMVVTSISFSTEERKFGPFGRENGTHFSLPISKAIFAG 214
                    +  ISGT G +    VVTS++F T ++ +GPFG    + FSLP++K  FAG
Sbjct: 70  TITFADDEDITAISGTFGAYYHLTVVTSLTFQTNKKVYGPFGTVASSSFSLPLTKGKFAG 129

Query: 213 FFGRSGDLLNAIGVYLKP 160
           FFG SGD+L++IG  + P
Sbjct: 130 FFGNSGDVLDSIGGVVVP 147


>gb|AAL84816.1|AF477033_1 tuber agglutinin [Helianthus tuberosus]
          Length = 147

 Score =  105 bits (263), Expect = 5e-21
 Identities = 60/138 (43%), Positives = 78/138 (56%), Gaps = 1/138 (0%)
 Frame = -1

Query: 570 GPWGSSDGENWSFKARG-KITKIFIGHGECIDSIGFASQGDDGNVLHSPRFGGFGGDAXX 394
           GPWG + G+ W   A G KIT I I  G CI SI F  +  D    HS +FG   GD   
Sbjct: 11  GPWGGNGGKRWLQTAHGGKITSIIIKGGTCIFSIQFVYRDKDNIEHHSGQFG-VQGDKAE 69

Query: 393 XXXXXXXXXLNVISGTIGYFESQMVVTSISFSTEERKFGPFGRENGTHFSLPISKAIFAG 214
                    +  ISGT G +    VVTS++F T ++ +GPFG   G+ FSLP++K  FAG
Sbjct: 70  TITFADDEDITGISGTFGAYYQMTVVTSLTFKTNKKVYGPFGTVAGSSFSLPLTKGKFAG 129

Query: 213 FFGRSGDLLNAIGVYLKP 160
           FFG SGD+L++IG  + P
Sbjct: 130 FFGNSGDVLDSIGGVVVP 147


>pdb|1C3K|A Chain A, Crystal Structure Of Helianthus Tuberosus Lectin
           gi|6980705|pdb|1C3M|A Chain A, Crystal Structure Of
           Heltuba Complexed To Man(1-3)man gi|6980706|pdb|1C3N|A
           Chain A, Crystal Structure Of Helianthus Tuberosus
           Lectin Complexed To Man(1- 2)man
           gi|4091895|gb|AAD11575.1| lectin 1 [Helianthus
           tuberosus]
          Length = 147

 Score =  105 bits (262), Expect = 6e-21
 Identities = 59/138 (42%), Positives = 77/138 (55%), Gaps = 1/138 (0%)
 Frame = -1

Query: 570 GPWGSSDGENWSFKARG-KITKIFIGHGECIDSIGFASQGDDGNVLHSPRFGGFGGDAXX 394
           GPWG + G+ W   A G KIT I I  G CI SI F  +  D    HS +FG  G D   
Sbjct: 11  GPWGGNGGKRWLQTAHGGKITSIIIKGGTCIFSIQFVYKDKDNIEYHSGKFGVLG-DKAE 69

Query: 393 XXXXXXXXXLNVISGTIGYFESQMVVTSISFSTEERKFGPFGRENGTHFSLPISKAIFAG 214
                    +  ISGT G +    VVTS++F T ++ +GPFG    + FSLP++K  FAG
Sbjct: 70  TITFAEDEDITAISGTFGAYYHMTVVTSLTFQTNKKVYGPFGTVASSSFSLPLTKGKFAG 129

Query: 213 FFGRSGDLLNAIGVYLKP 160
           FFG SGD+L++IG  + P
Sbjct: 130 FFGNSGDVLDSIGGVVVP 147


>gb|AAD11578.1| lectin 2 [Helianthus tuberosus]
          Length = 147

 Score =  103 bits (258), Expect = 2e-20
 Identities = 59/138 (42%), Positives = 77/138 (55%), Gaps = 1/138 (0%)
 Frame = -1

Query: 570 GPWGSSDGENWSFKARG-KITKIFIGHGECIDSIGFASQGDDGNVLHSPRFGGFGGDAXX 394
           GPWG + G+ W   A G KIT I I  G CI SI F  +  D     S +FG   GD   
Sbjct: 11  GPWGGNGGKRWLQTAHGGKITSIIIKGGTCIFSIQFVYKDKDNIEYLSGQFG-VQGDKAE 69

Query: 393 XXXXXXXXXLNVISGTIGYFESQMVVTSISFSTEERKFGPFGRENGTHFSLPISKAIFAG 214
                    +  ISGT G +    VVTS++F T ++ +GPFG   G+ FSLP++K  FAG
Sbjct: 70  TITFADDEDITAISGTFGAYYQMTVVTSLTFQTNKKVYGPFGTVAGSRFSLPLTKGKFAG 129

Query: 213 FFGRSGDLLNAIGVYLKP 160
           FFG SGD+L++IG  + P
Sbjct: 130 FFGNSGDVLDSIGGVVVP 147


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