BLASTX nr result

ID: Atractylodes21_contig00002324 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00002324
         (362 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFN53638.1| hypothetical protein [Linum usitatissimum]             137   7e-31
ref|XP_002276914.1| PREDICTED: U4/U6 small nuclear ribonucleopro...   136   2e-30
emb|CAN64891.1| hypothetical protein VITISV_016440 [Vitis vinifera]   136   2e-30
ref|XP_002308919.1| predicted protein [Populus trichocarpa] gi|2...   134   1e-29
ref|XP_002530100.1| U4/U6 small nuclear ribonucleoprotein Prp4, ...   133   2e-29

>gb|AFN53638.1| hypothetical protein [Linum usitatissimum]
          Length = 685

 Score =  137 bits (346), Expect = 7e-31
 Identities = 73/120 (60%), Positives = 82/120 (68%)
 Frame = -1

Query: 362 LRMIMAKLDSEGQLERLMKXXXXXXXXXXXVXXXXXXXXXXXEAIQYPFYTEGSMALLKA 183
           LRM+MAKLDSEGQLE+LMK                         ++YPFYTEGS  LL A
Sbjct: 304 LRMLMAKLDSEGQLEKLMKAHEEEEAAATTTAYDAEEEM-----VEYPFYTEGSRELLNA 358

Query: 182 RYEIAKDSVVKAAMRLGSARRKRDDPDEDLDAEINWALENAKSFALDCSEIGDDRPLSGC 3
           R  I K SVV+AA+RL  ARRKRDDPDED DAEINWALE A++ ALDCSE+GDDRPLS C
Sbjct: 359 RVSIVKYSVVRAALRLQRARRKRDDPDEDEDAEINWALEQARNLALDCSEVGDDRPLSSC 418


>ref|XP_002276914.1| PREDICTED: U4/U6 small nuclear ribonucleoprotein PRP4-like
           protein-like [Vitis vinifera]
          Length = 577

 Score =  136 bits (342), Expect = 2e-30
 Identities = 73/120 (60%), Positives = 83/120 (69%)
 Frame = -1

Query: 362 LRMIMAKLDSEGQLERLMKXXXXXXXXXXXVXXXXXXXXXXXEAIQYPFYTEGSMALLKA 183
           LRMIMAKLD+EGQLE+LMK                         +QYPFYTEGS +LL+A
Sbjct: 176 LRMIMAKLDAEGQLEKLMKAHEEEEAAAPVAMEEVEEE-----TLQYPFYTEGSKSLLEA 230

Query: 182 RYEIAKDSVVKAAMRLGSARRKRDDPDEDLDAEINWALENAKSFALDCSEIGDDRPLSGC 3
           R EIAK S+ +AA RL  ARRKRDDPDEDLDAE++W L+ A S  LDCSEIGDDRPLSGC
Sbjct: 231 RVEIAKYSIKRAASRLYRARRKRDDPDEDLDAEMDWVLKEAGSLVLDCSEIGDDRPLSGC 290


>emb|CAN64891.1| hypothetical protein VITISV_016440 [Vitis vinifera]
          Length = 1088

 Score =  136 bits (342), Expect = 2e-30
 Identities = 73/120 (60%), Positives = 83/120 (69%)
 Frame = -1

Query: 362  LRMIMAKLDSEGQLERLMKXXXXXXXXXXXVXXXXXXXXXXXEAIQYPFYTEGSMALLKA 183
            LRMIMAKLD+EGQLE+LMK                         +QYPFYTEGS +LL+A
Sbjct: 687  LRMIMAKLDAEGQLEKLMKAHEEEEAAAPVAMEEVEEE-----TLQYPFYTEGSKSLLEA 741

Query: 182  RYEIAKDSVVKAAMRLGSARRKRDDPDEDLDAEINWALENAKSFALDCSEIGDDRPLSGC 3
            R EIAK S+ +AA RL  ARRKRDDPDEDLDAE++W L+ A S  LDCSEIGDDRPLSGC
Sbjct: 742  RVEIAKYSIKRAASRLYRARRKRDDPDEDLDAEMDWVLKEAGSLVLDCSEIGDDRPLSGC 801


>ref|XP_002308919.1| predicted protein [Populus trichocarpa] gi|222854895|gb|EEE92442.1|
           predicted protein [Populus trichocarpa]
          Length = 548

 Score =  134 bits (336), Expect = 1e-29
 Identities = 71/120 (59%), Positives = 83/120 (69%)
 Frame = -1

Query: 362 LRMIMAKLDSEGQLERLMKXXXXXXXXXXXVXXXXXXXXXXXEAIQYPFYTEGSMALLKA 183
           LRM+MAKLDSEGQLE+LMK                         +QYPFYTEGS  LL A
Sbjct: 148 LRMLMAKLDSEGQLEKLMKVHEEEEAASTAAAEDAEEEF-----VQYPFYTEGSKELLDA 202

Query: 182 RYEIAKDSVVKAAMRLGSARRKRDDPDEDLDAEINWALENAKSFALDCSEIGDDRPLSGC 3
           R +IAK S+ KAA+RL  ARRKRDDPDED DAEI+W+L  A+S +L+CSE+GDDRPLSGC
Sbjct: 203 RIDIAKYSISKAALRLQRARRKRDDPDEDEDAEIDWSLNQAESLSLNCSELGDDRPLSGC 262


>ref|XP_002530100.1| U4/U6 small nuclear ribonucleoprotein Prp4, putative [Ricinus
           communis] gi|223530411|gb|EEF32299.1| U4/U6 small
           nuclear ribonucleoprotein Prp4, putative [Ricinus
           communis]
          Length = 541

 Score =  133 bits (334), Expect = 2e-29
 Identities = 72/120 (60%), Positives = 83/120 (69%)
 Frame = -1

Query: 362 LRMIMAKLDSEGQLERLMKXXXXXXXXXXXVXXXXXXXXXXXEAIQYPFYTEGSMALLKA 183
           LRM+MAKLDSEGQLE+LM                        E ++YPFYTEGS  LL A
Sbjct: 140 LRMLMAKLDSEGQLEKLM----IAHEEDVASATAGVMEDGEDEVLEYPFYTEGSKELLNA 195

Query: 182 RYEIAKDSVVKAAMRLGSARRKRDDPDEDLDAEINWALENAKSFALDCSEIGDDRPLSGC 3
           R +IAK SVVKA++R+  ARRKRDDPDED+D+EI+W LE A SF LD SEIGDDRPLSGC
Sbjct: 196 RIDIAKYSVVKASLRIQRARRKRDDPDEDVDSEIDWVLEQAGSFVLDSSEIGDDRPLSGC 255


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