BLASTX nr result

ID: Atractylodes21_contig00002290 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00002290
         (1342 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002310654.1| predicted protein [Populus trichocarpa] gi|2...   587   e-165
ref|XP_002278958.1| PREDICTED: photosystem II stability/assembly...   584   e-164
ref|XP_003540641.1| PREDICTED: photosystem II stability/assembly...   583   e-164
ref|XP_002520925.1| Photosystem II stability/assembly factor HCF...   583   e-164
ref|XP_004135957.1| PREDICTED: photosystem II stability/assembly...   580   e-163

>ref|XP_002310654.1| predicted protein [Populus trichocarpa] gi|222853557|gb|EEE91104.1|
            predicted protein [Populus trichocarpa]
          Length = 394

 Score =  587 bits (1513), Expect = e-165
 Identities = 290/377 (76%), Positives = 323/377 (85%), Gaps = 3/377 (0%)
 Frame = -3

Query: 1328 RNFQQPPRSLSTIKASALNRRDFIXXXXXXXXXXXXAPIIGLDNPSIAKA---DALSEWE 1158
            +N   P +     +   LNRR FI            +P+I   NP  A A   D+LSEWE
Sbjct: 20   QNSHSPSQQPRLSQRPELNRRHFISQTASLSSLPLLSPLIL--NPQQANAAAEDSLSEWE 77

Query: 1157 RVFLPIDPGVVLLDIAFVPEDPSHGFLLGTRQTLLETKDGGNTWISRSISSAEDEDFNYR 978
            RV+LPIDPGVVLLDIAFVP+D +HGFLLGTRQT++ETKDGGNTW+ RSI SAEDEDFNYR
Sbjct: 78   RVYLPIDPGVVLLDIAFVPDDTNHGFLLGTRQTIMETKDGGNTWVQRSIPSAEDEDFNYR 137

Query: 977  FNAISFKGKEGWIVGKPAILLHTSDSGDSWERIPLSAELPGDMVYIKATGENSAEMVTDE 798
            FN+ISFKGKEGWIVGKPAILL+T+DSG++WERIPLSA+LPGDMVYIKATGE SAEMVTDE
Sbjct: 138  FNSISFKGKEGWIVGKPAILLYTADSGETWERIPLSAQLPGDMVYIKATGEKSAEMVTDE 197

Query: 797  GAIYVTANRGYNWRAAVQETVSATLNRTVSSGISGASYYTGTFNTVNRSPEGNYVAVSSR 618
            GAIY+T+NRGYNWRAAVQE+VSATLNRTVSSGISGASYYTGTFNTVNRSP GNYVAVSSR
Sbjct: 198  GAIYITSNRGYNWRAAVQESVSATLNRTVSSGISGASYYTGTFNTVNRSPNGNYVAVSSR 257

Query: 617  GNFYLTWEPGQPYWQPHNRSVARRIQNMGWRADXXXXXXXXXXXXXLSKGTGITEEFEEI 438
            GNFYLTWEPGQ +WQPHNR++ARRIQNMGWRAD             LSKGTGI+EEFEEI
Sbjct: 258  GNFYLTWEPGQAFWQPHNRAIARRIQNMGWRADGGLWLLVRGGGLYLSKGTGISEEFEEI 317

Query: 437  PVQSRGFGILDVGYKSKEEAWAAGGSGVLLKTTNSGKSWSRDKAADNIAANLYSVKFIND 258
            PVQSRGFGILDVGY+SKEEAWAAGGSGVLL+TTN GK+W+RDKAADNIAANLYSVKFI+D
Sbjct: 318  PVQSRGFGILDVGYRSKEEAWAAGGSGVLLRTTNGGKTWTRDKAADNIAANLYSVKFIDD 377

Query: 257  RQGFVLGNDGVLLKYLG 207
            ++GFVLGNDGVLL+YLG
Sbjct: 378  KKGFVLGNDGVLLRYLG 394


>ref|XP_002278958.1| PREDICTED: photosystem II stability/assembly factor HCF136,
            chloroplastic [Vitis vinifera]
            gi|297737938|emb|CBI27139.3| unnamed protein product
            [Vitis vinifera]
          Length = 404

 Score =  584 bits (1506), Expect = e-164
 Identities = 280/336 (83%), Positives = 312/336 (92%)
 Frame = -3

Query: 1214 IIGLDNPSIAKADALSEWERVFLPIDPGVVLLDIAFVPEDPSHGFLLGTRQTLLETKDGG 1035
            I+G++ P+ ++   LSEWERV+LPIDPGVVLLDIAFVP+D SHGFLLGTRQT++ETKDGG
Sbjct: 69   ILGIEPPAKSEEPLLSEWERVYLPIDPGVVLLDIAFVPDDLSHGFLLGTRQTIMETKDGG 128

Query: 1034 NTWISRSISSAEDEDFNYRFNAISFKGKEGWIVGKPAILLHTSDSGDSWERIPLSAELPG 855
            NTW+ RSI SAEDEDFNYRFN+ISFKGKEGWIVGKP+ILL+TSD+G+SWERIPLSA+LPG
Sbjct: 129  NTWVPRSIPSAEDEDFNYRFNSISFKGKEGWIVGKPSILLYTSDAGESWERIPLSAQLPG 188

Query: 854  DMVYIKATGENSAEMVTDEGAIYVTANRGYNWRAAVQETVSATLNRTVSSGISGASYYTG 675
            D+VYIKATGE SAEMVTDEGAIYVT+NRGYNWRAAVQETVSATLNRTVSSGISGASYYTG
Sbjct: 189  DIVYIKATGEKSAEMVTDEGAIYVTSNRGYNWRAAVQETVSATLNRTVSSGISGASYYTG 248

Query: 674  TFNTVNRSPEGNYVAVSSRGNFYLTWEPGQPYWQPHNRSVARRIQNMGWRADXXXXXXXX 495
            TFNTVNRSP+G+YVAVSSRGNFYLTWEPGQPYWQPHNR+VARRIQNMGWRAD        
Sbjct: 249  TFNTVNRSPDGSYVAVSSRGNFYLTWEPGQPYWQPHNRAVARRIQNMGWRADGGLWLLVR 308

Query: 494  XXXXXLSKGTGITEEFEEIPVQSRGFGILDVGYKSKEEAWAAGGSGVLLKTTNSGKSWSR 315
                 LSKGTGI+E+FEEIPVQSRGFGILDVGY+SKEEAWAAGGSGVLL+TTN GK+W+R
Sbjct: 309  GGGLYLSKGTGISEDFEEIPVQSRGFGILDVGYRSKEEAWAAGGSGVLLRTTNGGKTWTR 368

Query: 314  DKAADNIAANLYSVKFINDRQGFVLGNDGVLLKYLG 207
            DKAADNIAANLYSVKFI+D +GFVLGNDGVLL++LG
Sbjct: 369  DKAADNIAANLYSVKFIDDTKGFVLGNDGVLLRFLG 404


>ref|XP_003540641.1| PREDICTED: photosystem II stability/assembly factor HCF136,
            chloroplastic-like [Glycine max]
          Length = 393

 Score =  583 bits (1504), Expect = e-164
 Identities = 281/335 (83%), Positives = 305/335 (91%)
 Frame = -3

Query: 1211 IGLDNPSIAKADALSEWERVFLPIDPGVVLLDIAFVPEDPSHGFLLGTRQTLLETKDGGN 1032
            + L   +    DALSEWERV+LPIDPGVVLLDIAFVP+DP+HGFLLGTRQT+LETKDGGN
Sbjct: 59   VSLPQLTARSEDALSEWERVYLPIDPGVVLLDIAFVPDDPNHGFLLGTRQTILETKDGGN 118

Query: 1031 TWISRSISSAEDEDFNYRFNAISFKGKEGWIVGKPAILLHTSDSGDSWERIPLSAELPGD 852
            TW  RSI SAEDEDFNYRFN+ISFKGKEGWIVGKP+ILL+TSD+GDSWERIPLSAELPGD
Sbjct: 119  TWAPRSIPSAEDEDFNYRFNSISFKGKEGWIVGKPSILLYTSDAGDSWERIPLSAELPGD 178

Query: 851  MVYIKATGENSAEMVTDEGAIYVTANRGYNWRAAVQETVSATLNRTVSSGISGASYYTGT 672
            MVYIKATGE SAEMVTDEGAIYVTANRGYNWRAAVQETVSATLNRTVSSGISGASYYTGT
Sbjct: 179  MVYIKATGEKSAEMVTDEGAIYVTANRGYNWRAAVQETVSATLNRTVSSGISGASYYTGT 238

Query: 671  FNTVNRSPEGNYVAVSSRGNFYLTWEPGQPYWQPHNRSVARRIQNMGWRADXXXXXXXXX 492
            FNTVNRSP+G YVAVSSRGNFYLTWEPGQP+WQPHNR+VARRIQNMGWRAD         
Sbjct: 239  FNTVNRSPDGRYVAVSSRGNFYLTWEPGQPFWQPHNRAVARRIQNMGWRADGGLWLLVRG 298

Query: 491  XXXXLSKGTGITEEFEEIPVQSRGFGILDVGYKSKEEAWAAGGSGVLLKTTNSGKSWSRD 312
                LSKG G+TEEFEE+PVQSRGFGILDVGY+S +EAWAAGGSG+LL+TTN GKSW RD
Sbjct: 299  GGLYLSKGKGLTEEFEEVPVQSRGFGILDVGYRSTDEAWAAGGSGILLRTTNGGKSWIRD 358

Query: 311  KAADNIAANLYSVKFINDRQGFVLGNDGVLLKYLG 207
            KAADNIAANLYSVKFI++++GFVLGNDGVLL+YLG
Sbjct: 359  KAADNIAANLYSVKFIDEKKGFVLGNDGVLLRYLG 393


>ref|XP_002520925.1| Photosystem II stability/assembly factor HCF136, chloroplast
            precursor, putative [Ricinus communis]
            gi|223539891|gb|EEF41470.1| Photosystem II
            stability/assembly factor HCF136, chloroplast precursor,
            putative [Ricinus communis]
          Length = 397

 Score =  583 bits (1502), Expect = e-164
 Identities = 288/379 (75%), Positives = 327/379 (86%), Gaps = 3/379 (0%)
 Frame = -3

Query: 1334 HSRNFQQPPRSLSTIKAS---ALNRRDFIXXXXXXXXXXXXAPIIGLDNPSIAKADALSE 1164
            HS++   P  SL+ +      +LNRR F+            +P+I +  P+ A+ + LSE
Sbjct: 21   HSQSRFVPKASLNNVHLPHHHSLNRRQFLSQTATVSLPLLSSPLI-IQQPANAE-ETLSE 78

Query: 1163 WERVFLPIDPGVVLLDIAFVPEDPSHGFLLGTRQTLLETKDGGNTWISRSISSAEDEDFN 984
            WERV+LP DPGVVLLDIAFVP+D +HGFLLGTRQT+LETKDGGNTW+SRSI SAEDEDFN
Sbjct: 79   WERVYLPSDPGVVLLDIAFVPDDMNHGFLLGTRQTILETKDGGNTWVSRSIPSAEDEDFN 138

Query: 983  YRFNAISFKGKEGWIVGKPAILLHTSDSGDSWERIPLSAELPGDMVYIKATGENSAEMVT 804
            YRFN+ISFKGKEGWIVGKPAILL+TSD+GDSW+RIPLSA+LPGDMVYIKATGE SAEMVT
Sbjct: 139  YRFNSISFKGKEGWIVGKPAILLYTSDAGDSWQRIPLSAQLPGDMVYIKATGEKSAEMVT 198

Query: 803  DEGAIYVTANRGYNWRAAVQETVSATLNRTVSSGISGASYYTGTFNTVNRSPEGNYVAVS 624
            D+GAIY+T+N GYNWRAAVQETVSATLNRTVSSGISGASYYTGTFNTVNRSP+GNYVAVS
Sbjct: 199  DQGAIYITSNGGYNWRAAVQETVSATLNRTVSSGISGASYYTGTFNTVNRSPDGNYVAVS 258

Query: 623  SRGNFYLTWEPGQPYWQPHNRSVARRIQNMGWRADXXXXXXXXXXXXXLSKGTGITEEFE 444
            SRGNFYLTWEPGQP+WQPHNR+VARRIQNMGWRAD             LSKGTGI+E+FE
Sbjct: 259  SRGNFYLTWEPGQPFWQPHNRAVARRIQNMGWRADGGLWLLVRGGGLYLSKGTGISEDFE 318

Query: 443  EIPVQSRGFGILDVGYKSKEEAWAAGGSGVLLKTTNSGKSWSRDKAADNIAANLYSVKFI 264
            EI VQSRGFGILDVGY+SK+EAWAAGGSG+LL+TTN GK+W+RDKAAD+IAANLYSVKFI
Sbjct: 319  EISVQSRGFGILDVGYRSKDEAWAAGGSGILLRTTNGGKTWTRDKAADSIAANLYSVKFI 378

Query: 263  NDRQGFVLGNDGVLLKYLG 207
            ND +GFVLGNDGVLL+YLG
Sbjct: 379  NDSKGFVLGNDGVLLRYLG 397


>ref|XP_004135957.1| PREDICTED: photosystem II stability/assembly factor HCF136,
            chloroplastic-like [Cucumis sativus]
            gi|449488796|ref|XP_004158174.1| PREDICTED: photosystem
            II stability/assembly factor HCF136, chloroplastic-like
            [Cucumis sativus]
          Length = 406

 Score =  580 bits (1496), Expect = e-163
 Identities = 287/374 (76%), Positives = 324/374 (86%), Gaps = 6/374 (1%)
 Frame = -3

Query: 1310 PRSLST------IKASALNRRDFIXXXXXXXXXXXXAPIIGLDNPSIAKADALSEWERVF 1149
            PR+LS+      +  S++NRR F+             P I    P+ ++ ++LSEWER++
Sbjct: 35   PRTLSSTTPKASLHNSSINRRHFVADTAAAVSLSLS-PFIAPVQPAKSE-ESLSEWERLY 92

Query: 1148 LPIDPGVVLLDIAFVPEDPSHGFLLGTRQTLLETKDGGNTWISRSISSAEDEDFNYRFNA 969
            LPIDPGVVLLDIAFVP+D +HGFLLGTRQT+LETKDGG TW  RSI SAE+EDFNYRFN+
Sbjct: 93   LPIDPGVVLLDIAFVPDDMNHGFLLGTRQTILETKDGGRTWAPRSIPSAEEEDFNYRFNS 152

Query: 968  ISFKGKEGWIVGKPAILLHTSDSGDSWERIPLSAELPGDMVYIKATGENSAEMVTDEGAI 789
            ISFKGKEGWIVGKPAILL+TSD+G+SWERIPLSA+LPGDMVYIKATGE SAEMVTDEGAI
Sbjct: 153  ISFKGKEGWIVGKPAILLYTSDAGESWERIPLSAQLPGDMVYIKATGEKSAEMVTDEGAI 212

Query: 788  YVTANRGYNWRAAVQETVSATLNRTVSSGISGASYYTGTFNTVNRSPEGNYVAVSSRGNF 609
            YVT+N+GYNW+AAVQETVSATLNRTVSSGISGASYYTGTFNTVNRSP+G YVAVSSRGNF
Sbjct: 213  YVTSNKGYNWKAAVQETVSATLNRTVSSGISGASYYTGTFNTVNRSPDGRYVAVSSRGNF 272

Query: 608  YLTWEPGQPYWQPHNRSVARRIQNMGWRADXXXXXXXXXXXXXLSKGTGITEEFEEIPVQ 429
            YLTWEPGQP+WQPHNR++ARRIQNMGWRAD             LSKGTGI+EEFEE+PVQ
Sbjct: 273  YLTWEPGQPFWQPHNRAIARRIQNMGWRADGGLWLLVRGGGLFLSKGTGISEEFEEVPVQ 332

Query: 428  SRGFGILDVGYKSKEEAWAAGGSGVLLKTTNSGKSWSRDKAADNIAANLYSVKFINDRQG 249
            SRGFGILDVGY+SKEEAWAAGGSGVLLKTTN G+SW+RDKAADNIAANLYSVKFIND++G
Sbjct: 333  SRGFGILDVGYRSKEEAWAAGGSGVLLKTTNGGRSWTRDKAADNIAANLYSVKFINDKKG 392

Query: 248  FVLGNDGVLLKYLG 207
            FVLGNDGVLL+YLG
Sbjct: 393  FVLGNDGVLLQYLG 406


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