BLASTX nr result

ID: Atractylodes21_contig00002283 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00002283
         (825 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272147.1| PREDICTED: upstream activation factor subuni...   137   2e-30
emb|CAN78429.1| hypothetical protein VITISV_011142 [Vitis vinifera]   137   3e-30
ref|XP_002518650.1| brg-1 associated factor, putative [Ricinus c...   131   2e-28
ref|XP_002313162.1| predicted protein [Populus trichocarpa] gi|2...   131   2e-28
ref|XP_002298761.1| predicted protein [Populus trichocarpa] gi|1...   131   2e-28

>ref|XP_002272147.1| PREDICTED: upstream activation factor subunit spp27 [Vitis
           vinifera]
          Length = 145

 Score =  137 bits (346), Expect = 2e-30
 Identities = 79/147 (53%), Positives = 91/147 (61%), Gaps = 1/147 (0%)
 Frame = +3

Query: 66  MAMPLGFFSTLXXXXXXXXXXXXXXXXMLVH-PASFQPSHARLRTLVTYATASKPATETE 242
           MAM LG  ST                  L H P     ++ RL   VT A ASKP     
Sbjct: 1   MAMSLGVISTFFSGETASFSKSALSLTSLRHLPPPSPHTNLRLVRTVTSAAASKPPAAA- 59

Query: 243 TKKRAPRGFAKPRPVSPEMKDFLGGRTEIPRTEVLKVIWAYIKEKGLQDPANKKVIICDE 422
           T KR PRG  KPR +SPEM+DFLG   EIPRT+ LK IWAYIK+  LQDP NKK+I+CDE
Sbjct: 60  TGKREPRGIMKPRRISPEMQDFLGV-PEIPRTQALKQIWAYIKQHNLQDPENKKIIVCDE 118

Query: 423 KLKKIFGDRDQIMFLEIAGLISPHFLK 503
           KLK IF  +D++ FLEIAGLI+PHFLK
Sbjct: 119 KLKSIFAGKDRVGFLEIAGLINPHFLK 145


>emb|CAN78429.1| hypothetical protein VITISV_011142 [Vitis vinifera]
          Length = 145

 Score =  137 bits (345), Expect = 3e-30
 Identities = 79/147 (53%), Positives = 91/147 (61%), Gaps = 1/147 (0%)
 Frame = +3

Query: 66  MAMPLGFFSTLXXXXXXXXXXXXXXXXMLVH-PASFQPSHARLRTLVTYATASKPATETE 242
           MAM LG  ST                  L H P     ++ RL   VT A ASKP     
Sbjct: 1   MAMSLGVXSTFFSGETASFSKSALSLTSLRHLPPPSPHTNLRLVRTVTSAAASKPPAAA- 59

Query: 243 TKKRAPRGFAKPRPVSPEMKDFLGGRTEIPRTEVLKVIWAYIKEKGLQDPANKKVIICDE 422
           T KR PRG  KPR +SPEM+DFLG   EIPRT+ LK IWAYIK+  LQDP NKK+I+CDE
Sbjct: 60  TGKREPRGIMKPRRISPEMQDFLGV-PEIPRTQALKQIWAYIKQHNLQDPENKKIIVCDE 118

Query: 423 KLKKIFGDRDQIMFLEIAGLISPHFLK 503
           KLK IF  +D++ FLEIAGLI+PHFLK
Sbjct: 119 KLKSIFAGKDRVGFLEIAGLINPHFLK 145


>ref|XP_002518650.1| brg-1 associated factor, putative [Ricinus communis]
           gi|223542031|gb|EEF43575.1| brg-1 associated factor,
           putative [Ricinus communis]
          Length = 141

 Score =  131 bits (330), Expect = 2e-28
 Identities = 67/110 (60%), Positives = 81/110 (73%)
 Frame = +3

Query: 174 PSHARLRTLVTYATASKPATETETKKRAPRGFAKPRPVSPEMKDFLGGRTEIPRTEVLKV 353
           PS A LR +V   T     +  + ++R PRG  KPR VSPEM + +G  +EIPRT+ LK 
Sbjct: 34  PSSANLR-MVRTVTCCATVSSQQQEQRRPRGIMKPRRVSPEMAELVGA-SEIPRTQALKR 91

Query: 354 IWAYIKEKGLQDPANKKVIICDEKLKKIFGDRDQIMFLEIAGLISPHFLK 503
           IWA+IKE  LQDP NKK+IICDEKLKKIFG RD++ FLE+AGLISPHFLK
Sbjct: 92  IWAHIKENNLQDPENKKIIICDEKLKKIFGGRDRVGFLEVAGLISPHFLK 141


>ref|XP_002313162.1| predicted protein [Populus trichocarpa] gi|222849570|gb|EEE87117.1|
           predicted protein [Populus trichocarpa]
          Length = 141

 Score =  131 bits (330), Expect = 2e-28
 Identities = 72/112 (64%), Positives = 83/112 (74%), Gaps = 2/112 (1%)
 Frame = +3

Query: 174 PSHARL--RTLVTYATASKPATETETKKRAPRGFAKPRPVSPEMKDFLGGRTEIPRTEVL 347
           P++ R+   T+VT ATAS       T  RAPRG  KPR VSPEM DF+G   E+ RT+ L
Sbjct: 38  PANPRMVRSTVVTCATAS-------TGNRAPRGIMKPRRVSPEMADFIGA-PEVSRTQAL 89

Query: 348 KVIWAYIKEKGLQDPANKKVIICDEKLKKIFGDRDQIMFLEIAGLISPHFLK 503
           K+IWA+IKE  LQDP+NKK IICDEKLKKIF  RDQ+ FLEIAGLISPHFLK
Sbjct: 90  KLIWAHIKEHNLQDPSNKKNIICDEKLKKIFAGRDQVGFLEIAGLISPHFLK 141


>ref|XP_002298761.1| predicted protein [Populus trichocarpa] gi|118485810|gb|ABK94753.1|
           unknown [Populus trichocarpa]
           gi|222846019|gb|EEE83566.1| predicted protein [Populus
           trichocarpa]
          Length = 140

 Score =  131 bits (330), Expect = 2e-28
 Identities = 72/112 (64%), Positives = 85/112 (75%), Gaps = 1/112 (0%)
 Frame = +3

Query: 171 QPSHARL-RTLVTYATASKPATETETKKRAPRGFAKPRPVSPEMKDFLGGRTEIPRTEVL 347
           +P + R+ RT+VT ATAS       T  RAP G  KP+ VSPEM DF+G   E+ RT+VL
Sbjct: 37  RPVNLRMGRTVVTCATAS-------TGNRAPSGIMKPKRVSPEMADFVGA-PEVSRTQVL 88

Query: 348 KVIWAYIKEKGLQDPANKKVIICDEKLKKIFGDRDQIMFLEIAGLISPHFLK 503
           K+IWA+IKE+ LQDP+NKK IICDEKLKKIF  RDQ+ FLEIAGLISPHFLK
Sbjct: 89  KLIWAHIKERNLQDPSNKKNIICDEKLKKIFPGRDQVGFLEIAGLISPHFLK 140


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