BLASTX nr result

ID: Atractylodes21_contig00002161 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00002161
         (475 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281340.1| PREDICTED: uncharacterized protein LOC100245...   123   1e-26
ref|XP_002326517.1| predicted protein [Populus trichocarpa] gi|2...   116   2e-24
ref|XP_002519830.1| DNA binding protein, putative [Ricinus commu...   114   6e-24
ref|XP_002329567.1| predicted protein [Populus trichocarpa] gi|2...   112   3e-23
ref|XP_004148734.1| PREDICTED: uncharacterized protein LOC101204...   105   5e-21

>ref|XP_002281340.1| PREDICTED: uncharacterized protein LOC100245362 [Vitis vinifera]
           gi|297742130|emb|CBI33917.3| unnamed protein product
           [Vitis vinifera]
          Length = 353

 Score =  123 bits (309), Expect = 1e-26
 Identities = 70/119 (58%), Positives = 81/119 (68%)
 Frame = -1

Query: 358 FGDGSSPPGGFRAGGFSIEPARKKRGRPRKYSPSPDGNIALGLXXXXXXXXXXXXXXXGH 179
           +GDGSS   G R  GF+IEPA+KKRGRPRKY+P  DGNIALGL                 
Sbjct: 65  YGDGSST--GLRPCGFNIEPAKKKRGRPRKYAP--DGNIALGLAPTPIP----------- 109

Query: 178 LETSNDGGSAGGVTPNTDSSAKKHRGRPPGSGKKQLDALGAPGVGFTPHVITVKAGEDI 2
             T+  G + G  TP+++  AK++RGRPPGSGKKQLDALGA GVGFTPHVITV  GEDI
Sbjct: 110 -STAAHGDATG--TPSSEPPAKRNRGRPPGSGKKQLDALGAAGVGFTPHVITVNVGEDI 165


>ref|XP_002326517.1| predicted protein [Populus trichocarpa] gi|222833839|gb|EEE72316.1|
           predicted protein [Populus trichocarpa]
          Length = 286

 Score =  116 bits (290), Expect = 2e-24
 Identities = 66/107 (61%), Positives = 73/107 (68%), Gaps = 3/107 (2%)
 Frame = -1

Query: 313 FSIEPARKKRGRPRKYSPSPDGNIALGLXXXXXXXXXXXXXXXGHLETSNDGGSAGGVTP 134
           FSIEPA+KKRGRPRKY+P  DGNIALGL                  +  + GG+  GV P
Sbjct: 3   FSIEPAKKKRGRPRKYTP--DGNIALGLSPTPIHSGMSAG------QADSSGGAGSGVMP 54

Query: 133 NTDSS--AKKHRGRPPGSGKKQLDALGAP-GVGFTPHVITVKAGEDI 2
           +  S   +KKHRGRPPGSGKKQLDALG   GVGFTPHVITVKAGEDI
Sbjct: 55  DVASEHPSKKHRGRPPGSGKKQLDALGGTGGVGFTPHVITVKAGEDI 101


>ref|XP_002519830.1| DNA binding protein, putative [Ricinus communis]
           gi|223540876|gb|EEF42434.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 376

 Score =  114 bits (286), Expect = 6e-24
 Identities = 71/122 (58%), Positives = 80/122 (65%), Gaps = 5/122 (4%)
 Frame = -1

Query: 352 DGSSPPG--GFRAGGFSIEPARKKRGRPRKYSPSPDGNIALGLXXXXXXXXXXXXXXXGH 179
           DGSSPP   G R   FS++PA+KKRGRPRKY+P  DGNIALGL                H
Sbjct: 76  DGSSPPSSSGMR---FSMDPAKKKRGRPRKYTP--DGNIALGLSPTPISSSATSLPP--H 128

Query: 178 LETSNDGGSAGGVTPN--TDSSAKKHRGRPPGSGKKQLDAL-GAPGVGFTPHVITVKAGE 8
           +  S  G   G  TP   +D  +K++RGRPPGSGKKQLDAL G  GVGFTPHVITVKAGE
Sbjct: 129 VADSGSGVGVGIGTPAIASDPPSKRNRGRPPGSGKKQLDALGGVGGVGFTPHVITVKAGE 188

Query: 7   DI 2
           DI
Sbjct: 189 DI 190


>ref|XP_002329567.1| predicted protein [Populus trichocarpa] gi|222870276|gb|EEF07407.1|
           predicted protein [Populus trichocarpa]
          Length = 375

 Score =  112 bits (280), Expect = 3e-23
 Identities = 71/122 (58%), Positives = 78/122 (63%), Gaps = 5/122 (4%)
 Frame = -1

Query: 352 DGSSPPG--GFRAGGFSIEPARKKRGRPRKYSPSPDGNIALGLXXXXXXXXXXXXXXXGH 179
           DGSSP    G R   FSIEPA+KKRGRPRKY+P  DGNIALGL                 
Sbjct: 83  DGSSPTSSSGMR---FSIEPAKKKRGRPRKYTP--DGNIALGLSPTPVPSG--------- 128

Query: 178 LETSNDGGSAGGVTPNTDSS--AKKHRGRPPGSGKKQLDAL-GAPGVGFTPHVITVKAGE 8
           +   +     GGVT +  S   +KK+RGRPPGSGKKQLDAL G  GVGFTPHVITVKAGE
Sbjct: 129 ISAGHADSGGGGVTHDAASEHPSKKNRGRPPGSGKKQLDALGGVGGVGFTPHVITVKAGE 188

Query: 7   DI 2
           DI
Sbjct: 189 DI 190


>ref|XP_004148734.1| PREDICTED: uncharacterized protein LOC101204243 [Cucumis sativus]
           gi|449511145|ref|XP_004163876.1| PREDICTED:
           uncharacterized LOC101204243 [Cucumis sativus]
          Length = 362

 Score =  105 bits (261), Expect = 5e-21
 Identities = 66/140 (47%), Positives = 78/140 (55%), Gaps = 12/140 (8%)
 Frame = -1

Query: 385 RFPFDASDQFGDGSSPPGG------------FRAGGFSIEPARKKRGRPRKYSPSPDGNI 242
           RFPF++    G  S P                R GGF+I+  +KKRGRPRKYSP  DGNI
Sbjct: 60  RFPFNS--MMGSSSKPSESPNAASYDGSQSELRTGGFNIDSGKKKRGRPRKYSP--DGNI 115

Query: 241 ALGLXXXXXXXXXXXXXXXGHLETSNDGGSAGGVTPNTDSSAKKHRGRPPGSGKKQLDAL 62
           ALGL                   ++    SAG  +P  D   KK+RGRPPG+GK+Q+DAL
Sbjct: 116 ALGLSPTPIT------------SSAVPADSAGMHSP--DPRPKKNRGRPPGTGKRQMDAL 161

Query: 61  GAPGVGFTPHVITVKAGEDI 2
           G  GVGFTPHVI VK GEDI
Sbjct: 162 GTGGVGFTPHVILVKPGEDI 181


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